Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-513
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 51
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 50
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               5-374
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               5-519
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               5-572
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 36
               

               Conread position:
               7-528
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 50
               

               Conread position:
               12-353
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               43, 52
               

               Conread position:
               16-520
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               20-406
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               90, 30
               

               Conread position:
               61-224
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               61-369
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               165, 77
               

               Conread position:
               71-359
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 206
               

               Conread position:
               71-527
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 143
               

               Conread position:
               164-483
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               166-572
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               167-566
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 273
               

               Conread position:
               167-572
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 170
               

               Conread position:
               167-572
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               168-539
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               170-572
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               171-515
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               172-513
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               172-566
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               39, 158
               

               Conread position:
               174-375
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 175
               

               Conread position:
               174-527
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 116
               

               Conread position:
               186-499
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               190-482
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               191-482
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               231, 123
               

               Conread position:
               199-571
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               210-562
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               230-543
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               23, 195
               

               Conread position:
               261-526
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 155
               

               Conread position:
               269-540
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               124, 51
               

               Conread position:
               272-534
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               292-521
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               305-572
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 48
               

               Conread position:
               311-511
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               311-572
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               326-561
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               326-572
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 102
               

               Conread position:
               351-562
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               351-572
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               355-568
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               393-530
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 101
               

               Conread position:
               401-572
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               401-572
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               402-572
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               7, 142
               

               Conread position:
               422-572
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 0
               
Show alignments to all cow chromosomes.