Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               112, 52
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               112, 53
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               204, 56
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               3-571
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               4-572
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 20
               

               Conread position:
               5-379
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               277
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               5-474
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               5-527
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 44
               

               Conread position:
               14-177
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               20-370
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               56-318
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               54, 83
               

               Conread position:
               56-458
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               70-406
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 147
               

               Conread position:
               119-333
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 55
               

               Conread position:
               121-560
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               156-530
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               168-508
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               174-424
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               57, 172
               

               Conread position:
               181-561
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               49, 100
               

               Conread position:
               181-564
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 25
               

               Conread position:
               182-500
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               183-536
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               183-572
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               183-572
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               185-523
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               202-534
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               5, 74
               

               Conread position:
               203-508
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               232-566
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               245-527
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               142, 35
               

               Conread position:
               254-528
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               17, 86
               

               Conread position:
               255-484
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 185
               

               Conread position:
               261-387
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 78
               

               Conread position:
               263-572
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 74
               

               Conread position:
               272-524
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               279-551
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               313-570
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               315-543
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 89
               

               Conread position:
               403-572
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               405-543
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               412-566
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 0
               
Show alignments to all cow chromosomes.