Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               1-572
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 53
               

               Conread position:
               3-284
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               113, 51
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               125, 60
               

               Conread position:
               3-343
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               3-431
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 40
               

               Conread position:
               3-564
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               374
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               225, 56
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               6-534
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               346
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               12-156
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               12-520
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 270
               

               Conread position:
               12-571
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 47
               

               Conread position:
               19-376
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               20-376
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               21-534
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               61-224
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               61-458
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 278
               

               Conread position:
               65-335
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 94
               

               Conread position:
               109-379
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               117, 11
               

               Conread position:
               147-572
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 36
               

               Conread position:
               162-515
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               69, 100
               

               Conread position:
               166-444
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               36, 146
               

               Conread position:
               166-566
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               172-547
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               173-458
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 33
               

               Conread position:
               176-519
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 343
               

               Conread position:
               181-507
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               15, 191
               

               Conread position:
               181-515
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               181-564
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               181-566
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 107
               

               Conread position:
               183-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 172
               

               Conread position:
               188-541
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               193-517
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               38, 296
               

               Conread position:
               193-572
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 82
               

               Conread position:
               206-519
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               212-572
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 115
               

               Conread position:
               214-572
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 167
               

               Conread position:
               245-538
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               255-493
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 215
               

               Conread position:
               257-572
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               94, 8
               

               Conread position:
               261-572
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               120, 60
               

               Conread position:
               292-572
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 71
               

               Conread position:
               322-566
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 226
               

               Conread position:
               344-572
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               6, 195
               

               Conread position:
               345-566
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               402-562
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               412-572
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               427-571
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               428-572
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               92, 115
               
Show alignments to all cow chromosomes.