Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               137, 50
               

               Conread position:
               3-335
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 52
               

               Conread position:
               3-512
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 47
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               4-545
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               360
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               5, 61
               

               Conread position:
               5-319
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 48
               

               Conread position:
               5-513
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 262
               

               Conread position:
               6-328
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 58
               

               Conread position:
               12-566
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               13-569
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               14-207
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               19-379
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               95, 36
               

               Conread position:
               21-545
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               29-527
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               331
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               45-178
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               64-544
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               71-319
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               71-319
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               155, 41
               

               Conread position:
               71-328
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               42, 71
               

               Conread position:
               75-376
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               146-572
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               156-566
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 200
               

               Conread position:
               168-572
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 245
               

               Conread position:
               170-534
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               61, 176
               

               Conread position:
               170-566
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               172-376
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               172-516
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               59, 70
               

               Conread position:
               174-523
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 154
               

               Conread position:
               175-566
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               176-541
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               174, 53
               

               Conread position:
               176-572
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               26, 150
               

               Conread position:
               182-515
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 342
               

               Conread position:
               183-485
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               48, 147
               

               Conread position:
               187-572
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               188-555
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 136
               

               Conread position:
               191-522
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               200-567
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 148
               

               Conread position:
               202-572
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               203-572
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               210-517
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 113
               

               Conread position:
               212-571
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 171
               

               Conread position:
               226-572
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 329
               

               Conread position:
               227-570
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 47
               

               Conread position:
               274-562
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 105
               

               Conread position:
               279-570
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               70, 233
               

               Conread position:
               313-571
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               314-572
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               323-502
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               403-572
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               94, 69
               

               Conread position:
               407-572
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               418-571
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               93, 0
               
Show alignments to all cow chromosomes.