Cow genome map
Conread name: | rpigcf0_000927.y1 |
Conread position: | 3-320 |
Cow position: | chr29:254656-254972 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 220 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 107, 46 |
Conread position: | 3-328 |
Cow position: | chr29:4755428-4755116 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 222 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 137, 50 |
Conread position: | 3-335 |
Cow position: | chr29:18521451-18521125 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 52 |
Conread position: | 3-512 |
Cow position: | chr29:38247151-38246661 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 47 |
Conread position: | 3-572 |
Cow position: | chr29:2589309-2588755 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 65 |
Conread position: | 4-545 |
Cow position: | chr29:13634732-13634186 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 360 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 5, 61 |
Conread position: | 5-319 |
Cow position: | chr29:29615322-29614990 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 228 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 108, 48 |
Conread position: | 5-513 |
Cow position: | chr29:16662645-16663174 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 262 |
Conread position: | 6-328 |
Cow position: | chr29:2367206-2366883 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 230 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 43, 58 |
Conread position: | 12-566 |
Cow position: | chr29:2885888-2885322 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 48 |
Conread position: | 13-569 |
Cow position: | chr29:42268259-42268832 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 46 |
Conread position: | 14-207 |
Cow position: | chr29:10154177-10153990 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 147 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 39, 50 |
Conread position: | 19-379 |
Cow position: | chr29:19338570-19338935 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 262 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 95, 36 |
Conread position: | 21-545 |
Cow position: | chr29:477675-478221 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 407 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 29 |
Conread position: | 29-527 |
Cow position: | chr29:25088355-25088837 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 331 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 81, 25 |
Conread position: | 45-178 |
Cow position: | chr29:18694831-18694967 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 64-544 |
Cow position: | chr29:30812379-30812861 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 76 |
Conread position: | 71-319 |
Cow position: | chr29:12956664-12956424 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 179 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 43, 68 |
Conread position: | 71-319 |
Cow position: | chr29:27123697-27123459 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 176 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 155, 41 |
Conread position: | 71-328 |
Cow position: | chr29:7051590-7051853 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 191 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 42, 71 |
Conread position: | 75-376 |
Cow position: | chr29:43009452-43009137 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 211 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 38, 86 |
Conread position: | 146-572 |
Cow position: | chr29:6472027-6472446 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 293 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 83, 60 |
Conread position: | 156-566 |
Cow position: | chr29:17965677-17966096 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 200 |
Conread position: | 168-572 |
Cow position: | chr29:18338814-18338405 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 245 |
Conread position: | 170-534 |
Cow position: | chr29:18963474-18963835 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 252 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 61, 176 |
Conread position: | 170-566 |
Cow position: | chr29:32809194-32809571 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 286 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 64, 39 |
Conread position: | 172-376 |
Cow position: | chr29:29056919-29057124 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 147 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 18, 63 |
Conread position: | 172-516 |
Cow position: | chr29:19907092-19907439 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 229 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 59, 70 |
Conread position: | 174-523 |
Cow position: | chr29:43963783-43963441 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 247 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 57, 154 |
Conread position: | 175-566 |
Cow position: | chr29:18880647-18880286 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 265 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 32, 69 |
Conread position: | 176-541 |
Cow position: | chr29:19931097-19931439 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 256 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 174, 53 |
Conread position: | 176-572 |
Cow position: | chr29:133932-134312 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 280 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 26, 150 |
Conread position: | 182-515 |
Cow position: | chr29:7750128-7749806 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 241 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 51, 24 |
Conread position: | 182-572 |
Cow position: | chr29:13040806-13040400 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 342 |
Conread position: | 183-485 |
Cow position: | chr29:15758183-15758483 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 213 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 48, 147 |
Conread position: | 187-572 |
Cow position: | chr29:16359364-16359759 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 57 |
Conread position: | 188-555 |
Cow position: | chr29:34757782-34758143 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 136 |
Conread position: | 191-522 |
Cow position: | chr29:37961222-37960886 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 230 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 36, 26 |
Conread position: | 200-567 |
Cow position: | chr29:17339535-17339172 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 148 |
Conread position: | 202-572 |
Cow position: | chr29:31488633-31489000 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 67 |
Conread position: | 203-572 |
Cow position: | chr29:22455027-22454688 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 262 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 59, 31 |
Conread position: | 210-517 |
Cow position: | chr29:7959741-7959440 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 201 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 21, 113 |
Conread position: | 212-571 |
Cow position: | chr29:14034551-14034194 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 171 |
Conread position: | 226-572 |
Cow position: | chr29:8906313-8906669 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 329 |
Conread position: | 227-570 |
Cow position: | chr29:2481540-2481203 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 47 |
Conread position: | 274-562 |
Cow position: | chr29:9512714-9513001 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 105 |
Conread position: | 279-570 |
Cow position: | chr29:35036578-35036864 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 212 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 70, 233 |
Conread position: | 313-571 |
Cow position: | chr29:14032358-14032107 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 173 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 16, 65 |
Conread position: | 314-572 |
Cow position: | chr29:798518-798257 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 181 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 36, 16 |
Conread position: | 323-502 |
Cow position: | chr29:13653124-13653306 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 136 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 9, 16 |
Conread position: | 403-572 |
Cow position: | chr29:30921709-30921551 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 94, 69 |
Conread position: | 407-572 |
Cow position: | chr29:37207739-37207900 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 126 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 418-571 |
Cow position: | chr29:21198662-21198513 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 122 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.