Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               112, 52
               

               Conread position:
               2-519
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               3-136
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 57
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               296
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               227, 52
               

               Conread position:
               3-450
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               107, 55
               

               Conread position:
               3-535
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               362
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               3-572
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               5-505
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               5-520
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 45
               

               Conread position:
               6-439
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               197, 56
               

               Conread position:
               12-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 14
               

               Conread position:
               14-295
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               14-458
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               296
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               14-572
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 32
               

               Conread position:
               22-443
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               300
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               39-402
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               61-330
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               167, 52
               

               Conread position:
               71-289
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               41, 135
               

               Conread position:
               71-301
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               71-383
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               71-421
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 352
               

               Conread position:
               71-527
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               309
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               74-562
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 65
               

               Conread position:
               92-513
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               129-439
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               138-571
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 218
               

               Conread position:
               140-522
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 73
               

               Conread position:
               144-535
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               146-526
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               148-534
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               269, 44
               

               Conread position:
               157-527
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               70, 89
               

               Conread position:
               158-520
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               46, 167
               

               Conread position:
               162-558
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               65, 44
               

               Conread position:
               166-376
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               168-376
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               59, 186
               

               Conread position:
               168-377
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               168-572
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 124
               

               Conread position:
               172-526
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               173-562
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               174-543
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               176-515
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               62, 107
               

               Conread position:
               181-534
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               46, 144
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 39
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 178
               

               Conread position:
               182-566
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               182-566
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               187-570
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 171
               

               Conread position:
               189-561
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               42, 86
               

               Conread position:
               191-566
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               193-484
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               193-572
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 16
               

               Conread position:
               193-572
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               196-525
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 134
               

               Conread position:
               199-543
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 92
               

               Conread position:
               209-565
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 135
               

               Conread position:
               210-535
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               210-572
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               213-571
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               229-558
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               44, 197
               

               Conread position:
               237-572
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 312
               

               Conread position:
               248-572
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               248-572
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 40
               

               Conread position:
               271-522
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 21
               

               Conread position:
               271-572
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               76, 195
               

               Conread position:
               284-539
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               137, 50
               

               Conread position:
               284-572
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               315-572
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               348-572
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               360-572
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               5, 141
               

               Conread position:
               398-572
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               401-543
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               421-572
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               432-572
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               439-569
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 0
               
Show alignments to all cow chromosomes.