Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               3-338
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               3-504
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               344
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               228, 38
               

               Conread position:
               3-541
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 47
               

               Conread position:
               3-543
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 51
               

               Conread position:
               3-562
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               3-566
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               5-249
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               5-505
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 43
               

               Conread position:
               5-526
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               5-527
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               355
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               48, 181
               

               Conread position:
               12-319
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               16-402
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               39, 48
               

               Conread position:
               20-421
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               20-450
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               301
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               94, 18
               

               Conread position:
               34-319
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 179
               

               Conread position:
               71-332
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 68
               

               Conread position:
               71-332
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 87
               

               Conread position:
               71-459
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               71-572
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 221
               

               Conread position:
               74-572
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 72
               

               Conread position:
               140-568
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               142-540
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 64
               

               Conread position:
               151-542
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 23
               

               Conread position:
               163-572
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               37, 9
               

               Conread position:
               164-572
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 70
               

               Conread position:
               166-562
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               167-458
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               64, 123
               

               Conread position:
               168-458
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               168-508
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               168-562
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 367
               

               Conread position:
               172-532
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               232, 45
               

               Conread position:
               174-534
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               254
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               174-566
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 72
               

               Conread position:
               174-572
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               176-504
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               176-520
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 29
               

               Conread position:
               176-534
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               55, 95
               

               Conread position:
               176-543
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 120
               

               Conread position:
               176-566
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               178-566
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 180
               

               Conread position:
               179-572
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 27
               

               Conread position:
               181-519
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               181-532
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               181-546
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               48, 169
               

               Conread position:
               181-567
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               182-519
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               72, 92
               

               Conread position:
               183-380
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 159
               

               Conread position:
               183-543
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               183-543
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 144
               

               Conread position:
               183-566
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               51, 145
               

               Conread position:
               190-526
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               190-572
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 204
               

               Conread position:
               192-454
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               196-508
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 94
               

               Conread position:
               197-527
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 330
               

               Conread position:
               197-572
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               20, 144
               

               Conread position:
               199-572
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 206
               

               Conread position:
               200-566
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 132
               

               Conread position:
               212-519
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               225-535
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               47, 183
               

               Conread position:
               225-572
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               226-572
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 75
               

               Conread position:
               227-507
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               233-572
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 91
               

               Conread position:
               238-543
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               240-505
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 203
               

               Conread position:
               247-567
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               89, 98
               

               Conread position:
               248-566
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 87
               

               Conread position:
               249-516
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 160
               

               Conread position:
               287-572
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 206
               

               Conread position:
               292-566
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 87
               

               Conread position:
               293-529
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 60
               

               Conread position:
               305-543
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               72, 48
               

               Conread position:
               314-527
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               325-572
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               25, 140
               

               Conread position:
               348-572
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               352-572
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               384-566
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               407-572
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               145, 136
               
Show alignments to all cow chromosomes.