Cow genome map
Conread name: | rpigcf0_000927.y1 |
Conread position: | 1-441 |
Cow position: | chr7:23681749-23681325 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 299 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 112, 48 |
Conread position: | 3-320 |
Cow position: | chr7:40772399-40772710 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 221 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 110, 47 |
Conread position: | 3-374 |
Cow position: | chr7:38070395-38070021 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 266 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 110, 57 |
Conread position: | 3-527 |
Cow position: | chr7:48815267-48815768 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 61 |
Conread position: | 3-543 |
Cow position: | chr7:40621548-40622098 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 56 |
Conread position: | 3-561 |
Cow position: | chr7:22879894-22880444 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 21 |
Conread position: | 3-566 |
Cow position: | chr7:48762984-48763512 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 52 |
Conread position: | 3-572 |
Cow position: | chr7:34669754-34670304 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 47 |
Conread position: | 3-572 |
Cow position: | chr7:52130138-52130689 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 38 |
Conread position: | 5-157 |
Cow position: | chr7:34213957-34214102 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 50, 61 |
Conread position: | 5-166 |
Cow position: | chr7:12413918-12413759 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 108, 48 |
Conread position: | 5-189 |
Cow position: | chr7:34245170-34245346 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 132 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 5-315 |
Cow position: | chr7:68027441-68027741 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 222 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 221, 56 |
Conread position: | 5-329 |
Cow position: | chr7:48695414-48695741 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 236 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 48, 59 |
Conread position: | 5-508 |
Cow position: | chr7:24741236-24740720 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 113 |
Conread position: | 5-521 |
Cow position: | chr7:43234812-43234312 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 19 |
Conread position: | 5-521 |
Cow position: | chr7:48548265-48547729 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 70 |
Conread position: | 5-572 |
Cow position: | chr7:65953773-65953222 (view UCSC Genome Browser custom track) |
Alignm length: | 581 |
Alignm identity: | 382 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 113, 9 |
Conread position: | 9-484 |
Cow position: | chr7:48444155-48443672 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 311 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 46, 270 |
Conread position: | 11-443 |
Cow position: | chr7:41444970-41445418 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 308 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 39, 54 |
Conread position: | 11-458 |
Cow position: | chr7:39929925-39930359 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 304 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 102, 30 |
Conread position: | 12-209 |
Cow position: | chr7:47173195-47173003 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 144 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 43, 54 |
Conread position: | 19-164 |
Cow position: | chr7:9928766-9928625 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 95, 8 |
Conread position: | 19-372 |
Cow position: | chr7:28916729-28917072 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 244 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 94, 44 |
Conread position: | 20-443 |
Cow position: | chr7:50095008-50095445 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 44 |
Conread position: | 55-368 |
Cow position: | chr7:40263987-40263667 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 224 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 59, 85 |
Conread position: | 71-517 |
Cow position: | chr7:53359041-53358614 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 291 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 153, 42 |
Conread position: | 71-527 |
Cow position: | chr7:20355646-20356087 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 304 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 155, 42 |
Conread position: | 71-572 |
Cow position: | chr7:62515682-62516187 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 75 |
Conread position: | 72-372 |
Cow position: | chr7:63022812-63023127 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 72-543 |
Cow position: | chr7:25223293-25223745 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 324 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 37, 67 |
Conread position: | 74-375 |
Cow position: | chr7:42245009-42244708 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 219 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 39, 66 |
Conread position: | 89-332 |
Cow position: | chr7:46928675-46928931 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 184 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 135-508 |
Cow position: | chr7:1733453-1733080 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 247 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 140-516 |
Cow position: | chr7:15610740-15611099 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 259 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 198, 94 |
Conread position: | 156-503 |
Cow position: | chr7:25703455-25703109 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 247 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 76, 53 |
Conread position: | 162-523 |
Cow position: | chr7:34162561-34162917 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 21 |
Conread position: | 164-572 |
Cow position: | chr7:42222659-42222255 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 77 |
Conread position: | 166-517 |
Cow position: | chr7:59844535-59844875 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 230 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 65, 40 |
Conread position: | 167-543 |
Cow position: | chr7:39512828-39512443 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 145 |
Conread position: | 168-376 |
Cow position: | chr7:12659223-12659005 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 153 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 39, 184 |
Conread position: | 168-572 |
Cow position: | chr7:63548244-63547839 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 25 |
Conread position: | 169-519 |
Cow position: | chr7:20147555-20147208 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 242 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 175, 58 |
Conread position: | 169-572 |
Cow position: | chr7:20105243-20104840 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 158 |
Conread position: | 170-443 |
Cow position: | chr7:3134670-3134380 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 206 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 61, 276 |
Conread position: | 170-546 |
Cow position: | chr7:11593412-11593049 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 143 |
Conread position: | 171-543 |
Cow position: | chr7:58841430-58841804 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 35 |
Conread position: | 172-559 |
Cow position: | chr7:52752113-52751721 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 160 |
Conread position: | 174-519 |
Cow position: | chr7:7507343-7507681 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 32 |
Conread position: | 174-522 |
Cow position: | chr7:19399895-19399543 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 239 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 57, 150 |
Conread position: | 176-515 |
Cow position: | chr7:52533037-52532696 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 236 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 26, 46 |
Conread position: | 176-572 |
Cow position: | chr7:13822537-13822962 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 251 |
Conread position: | 177-572 |
Cow position: | chr7:48335687-48335290 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 118 |
Conread position: | 178-519 |
Cow position: | chr7:53986197-53985866 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 53 |
Conread position: | 181-534 |
Cow position: | chr7:40192527-40192895 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 253 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 50, 28 |
Conread position: | 181-535 |
Cow position: | chr7:28561264-28560887 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 288 |
Conread position: | 181-571 |
Cow position: | chr7:26195998-26195621 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 273 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 45, 119 |
Conread position: | 181-571 |
Cow position: | chr7:67498493-67498875 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 273 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 50, 143 |
Conread position: | 182-527 |
Cow position: | chr7:23257065-23256716 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 252 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 17, 45 |
Conread position: | 182-562 |
Cow position: | chr7:48859729-48859340 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 182-566 |
Cow position: | chr7:54855358-54855750 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 14 |
Conread position: | 183-396 |
Cow position: | chr7:41315648-41315424 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 44, 168 |
Conread position: | 183-572 |
Cow position: | chr7:27709877-27709484 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 23 |
Conread position: | 184-540 |
Cow position: | chr7:61461160-61460816 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 243 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 166, 50 |
Conread position: | 184-571 |
Cow position: | chr7:35754255-35754640 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 104 |
Conread position: | 186-543 |
Cow position: | chr7:39551140-39550799 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 261 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 51, 121 |
Conread position: | 186-572 |
Cow position: | chr7:61425357-61425732 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 94 |
Conread position: | 189-508 |
Cow position: | chr7:11872801-11872484 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 224 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 191-572 |
Cow position: | chr7:20289465-20289084 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 14 |
Conread position: | 191-572 |
Cow position: | chr7:37024644-37025010 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 126 |
Conread position: | 209-572 |
Cow position: | chr7:35171750-35171391 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 124 |
Conread position: | 210-570 |
Cow position: | chr7:65849245-65848890 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 243 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 17, 119 |
Conread position: | 227-513 |
Cow position: | chr7:56682904-56682630 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 201 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 227-543 |
Cow position: | chr7:28672180-28671866 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 78 |
Conread position: | 227-571 |
Cow position: | chr7:66335921-66335586 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 255 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 45, 103 |
Conread position: | 238-526 |
Cow position: | chr7:48205251-48204962 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 204 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 34, 103 |
Conread position: | 255-514 |
Cow position: | chr7:60761227-60761491 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 187 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 95, 155 |
Conread position: | 255-572 |
Cow position: | chr7:29378274-29377972 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 231 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 95, 67 |
Conread position: | 269-569 |
Cow position: | chr7:1398399-1398105 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 52 |
Conread position: | 274-572 |
Cow position: | chr7:63327973-63328258 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 214 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 105, 38 |
Conread position: | 303-532 |
Cow position: | chr7:21394316-21394089 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 71, 41 |
Conread position: | 310-566 |
Cow position: | chr7:3731907-3732160 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 185 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 107, 33 |
Conread position: | 344-566 |
Cow position: | chr7:26802520-26802301 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 6, 30 |
Conread position: | 348-567 |
Cow position: | chr7:20485695-20485907 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 162 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 54 |
Conread position: | 348-572 |
Cow position: | chr7:11187176-11187399 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 175 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 33, 53 |
Conread position: | 399-543 |
Cow position: | chr7:44543893-44543749 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 399-543 |
Cow position: | chr7:44548996-44548852 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 406-571 |
Cow position: | chr7:12920853-12920685 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 15, 32 |
Conread position: | 413-572 |
Cow position: | chr7:1608560-1608399 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 86, 134 |
Conread position: | 415-572 |
Cow position: | chr7:61754619-61754768 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 128 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.