Cow genome map


           Conread name:
           rpigcf0_000927.y1
        

               Conread position:
               3-250
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               227, 50
               

               Conread position:
               3-370
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 63
               

               Conread position:
               3-507
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               335
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               111, 36
               

               Conread position:
               3-533
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 54
               

               Conread position:
               5-443
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               106, 49
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               353
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               6-508
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 58
               

               Conread position:
               9-280
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               216, 46
               

               Conread position:
               12-272
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               12-283
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               12-372
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               12-572
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               61-333
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               47, 118
               

               Conread position:
               67-319
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 54
               

               Conread position:
               69-351
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               44, 231
               

               Conread position:
               71-376
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               71-379
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               43, 232
               

               Conread position:
               71-399
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               155, 41
               

               Conread position:
               72-270
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               72-485
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 258
               

               Conread position:
               73-572
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 133
               

               Conread position:
               121-572
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               289
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               124-535
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 27
               

               Conread position:
               146-572
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 60
               

               Conread position:
               152-461
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               120, 68
               

               Conread position:
               157-536
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 36
               

               Conread position:
               168-525
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 125
               

               Conread position:
               172-508
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               172-543
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               9, 49
               

               Conread position:
               174-534
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 171
               

               Conread position:
               176-505
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               176-535
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 206
               

               Conread position:
               177-529
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 29
               

               Conread position:
               177-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               179-458
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 179
               

               Conread position:
               180-516
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               51, 146
               

               Conread position:
               181-502
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               181-534
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               181-566
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 145
               

               Conread position:
               181-572
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               182-508
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               91, 36
               

               Conread position:
               182-572
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 27
               

               Conread position:
               183-485
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               183-528
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 52
               

               Conread position:
               184-541
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               166, 42
               

               Conread position:
               184-571
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               186-572
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 162
               

               Conread position:
               187-530
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               191-572
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 203
               

               Conread position:
               191-572
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               193-498
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               196-565
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 321
               

               Conread position:
               202-568
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               225-508
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               229-566
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               237-566
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 119
               

               Conread position:
               248-456
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               126, 13
               

               Conread position:
               248-566
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               250-564
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               252-522
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               253-521
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               19, 205
               

               Conread position:
               271-521
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               272-568
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 50
               

               Conread position:
               278-530
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               292-542
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               89, 27
               

               Conread position:
               305-572
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               16, 164
               

               Conread position:
               314-572
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               55, 45
               

               Conread position:
               315-572
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 239
               

               Conread position:
               331-572
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               344-559
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 49
               

               Conread position:
               357-572
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 162
               

               Conread position:
               401-541
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               411-572
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               412-571
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               413-572
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               426-565
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               431-572
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               83, 93
               
Show alignments to all cow chromosomes.