Cow genome map
Conread name: | rpigcf0_000927.y1 |
Conread position: | 3-318 |
Cow position: | chr9:5518182-5518507 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 234 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 106, 47 |
Conread position: | 3-485 |
Cow position: | chr9:8778771-8779267 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 61 |
Conread position: | 3-508 |
Cow position: | chr9:16746150-16745623 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 375 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 48 |
Conread position: | 3-520 |
Cow position: | chr9:52724772-52725278 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 50 |
Conread position: | 3-524 |
Cow position: | chr9:14961410-14960883 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 62 |
Conread position: | 3-571 |
Cow position: | chr9:10760887-10761454 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 61 |
Conread position: | 3-571 |
Cow position: | chr9:44408492-44407929 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 400 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 61 |
Conread position: | 3-572 |
Cow position: | chr9:41317521-41318077 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 428 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 47 |
Conread position: | 3-572 |
Cow position: | chr9:55365344-55364787 (view UCSC Genome Browser custom track) |
Alignm length: | 579 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 50 |
Conread position: | 5-332 |
Cow position: | chr9:40059872-40060202 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 59 |
Conread position: | 5-379 |
Cow position: | chr9:48118250-48118616 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 258 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 50, 20 |
Conread position: | 5-527 |
Cow position: | chr9:44553202-44552679 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 59 |
Conread position: | 12-377 |
Cow position: | chr9:41782361-41781978 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 38 |
Conread position: | 12-534 |
Cow position: | chr9:34204556-34204056 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 334 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 43, 52 |
Conread position: | 15-418 |
Cow position: | chr9:8600776-8600367 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 294 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 40, 18 |
Conread position: | 20-204 |
Cow position: | chr9:20579178-20579366 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 148 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 36, 44 |
Conread position: | 22-498 |
Cow position: | chr9:41789711-41789244 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 322 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 28, 119 |
Conread position: | 29-261 |
Cow position: | chr9:20109932-20109708 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 170 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 27, 35 |
Conread position: | 72-529 |
Cow position: | chr9:41958414-41958855 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 304 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 159, 36 |
Conread position: | 72-564 |
Cow position: | chr9:33669092-33668622 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 333 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 39, 67 |
Conread position: | 73-346 |
Cow position: | chr9:37431376-37431093 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 195 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 40, 71 |
Conread position: | 73-571 |
Cow position: | chr9:19079620-19080095 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 334 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 41, 74 |
Conread position: | 84-458 |
Cow position: | chr9:8951282-8950905 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 264 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 27, 20 |
Conread position: | 89-568 |
Cow position: | chr9:24850623-24850145 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 268 |
Conread position: | 95-511 |
Cow position: | chr9:27310373-27310806 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 307 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 19, 209 |
Conread position: | 119-376 |
Cow position: | chr9:26278836-26279089 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 191 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 107, 27 |
Conread position: | 119-530 |
Cow position: | chr9:47875598-47876030 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 92 |
Conread position: | 137-505 |
Cow position: | chr9:25546961-25546593 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 250 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 40, 70 |
Conread position: | 143-572 |
Cow position: | chr9:10319772-10320183 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 303 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 133, 50 |
Conread position: | 157-484 |
Cow position: | chr9:38692231-38692560 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 187 |
Conread position: | 161-570 |
Cow position: | chr9:34762550-34762960 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 35 |
Conread position: | 162-526 |
Cow position: | chr9:54924927-54924553 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 12 |
Conread position: | 163-534 |
Cow position: | chr9:54206031-54206398 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 230 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 68, 123 |
Conread position: | 165-568 |
Cow position: | chr9:5486153-5485764 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 285 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 57, 49 |
Conread position: | 166-571 |
Cow position: | chr9:55651318-55650927 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 40 |
Conread position: | 166-572 |
Cow position: | chr9:12184044-12183638 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 43 |
Conread position: | 168-376 |
Cow position: | chr9:34957756-34957970 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 150 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 59, 45 |
Conread position: | 169-572 |
Cow position: | chr9:1280800-1281210 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 46 |
Conread position: | 172-520 |
Cow position: | chr9:2858832-2858474 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 247 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 70, 34 |
Conread position: | 172-527 |
Cow position: | chr9:6738959-6739326 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 253 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 59, 92 |
Conread position: | 172-566 |
Cow position: | chr9:11849803-11849414 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 274 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 59, 76 |
Conread position: | 174-568 |
Cow position: | chr9:2223493-2223880 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 51 |
Conread position: | 174-572 |
Cow position: | chr9:44517848-44517464 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 279 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 57, 32 |
Conread position: | 176-412 |
Cow position: | chr9:43814727-43814489 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 166 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 59, 39 |
Conread position: | 176-519 |
Cow position: | chr9:52633207-52633550 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 241 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 55, 30 |
Conread position: | 176-527 |
Cow position: | chr9:11201867-11201522 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 239 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 96, 58 |
Conread position: | 176-539 |
Cow position: | chr9:2633876-2634255 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 260 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 55, 161 |
Conread position: | 176-566 |
Cow position: | chr9:59530025-59530391 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 261 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 41 |
Conread position: | 176-572 |
Cow position: | chr9:5621742-5622129 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 277 |
Conread position: | 176-572 |
Cow position: | chr9:11830296-11829896 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 30 |
Conread position: | 180-458 |
Cow position: | chr9:3724778-3725063 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 196 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 51, 26 |
Conread position: | 180-458 |
Cow position: | chr9:38193282-38193010 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 198 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 51, 7 |
Conread position: | 180-533 |
Cow position: | chr9:8099538-8099899 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 256 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 51, 132 |
Conread position: | 181-482 |
Cow position: | chr9:10004036-10003736 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 201 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 51, 25 |
Conread position: | 181-498 |
Cow position: | chr9:12356139-12355819 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 229 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 56, 284 |
Conread position: | 181-526 |
Cow position: | chr9:43037766-43037416 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 242 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 50, 193 |
Conread position: | 181-531 |
Cow position: | chr9:417413-417050 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 262 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 50, 217 |
Conread position: | 181-543 |
Cow position: | chr9:214182-214544 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 243 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 50, 28 |
Conread position: | 181-572 |
Cow position: | chr9:5141357-5140961 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 68 |
Conread position: | 182-560 |
Cow position: | chr9:14853172-14853554 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 274 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 46, 31 |
Conread position: | 183-376 |
Cow position: | chr9:13205290-13205483 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 138 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 66, 23 |
Conread position: | 184-530 |
Cow position: | chr9:5052958-5053305 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 163 |
Conread position: | 191-493 |
Cow position: | chr9:14507165-14506872 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 204 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 43, 18 |
Conread position: | 197-572 |
Cow position: | chr9:25502269-25502642 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 134 |
Conread position: | 210-541 |
Cow position: | chr9:13845989-13845657 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 54 |
Conread position: | 246-565 |
Cow position: | chr9:8161961-8161645 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 217 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 7, 96 |
Conread position: | 248-568 |
Cow position: | chr9:9634885-9635201 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 223 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 24, 96 |
Conread position: | 249-534 |
Cow position: | chr9:32816922-32817215 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 196 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 67, 259 |
Conread position: | 249-553 |
Cow position: | chr9:41904341-41904044 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 207 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 22, 75 |
Conread position: | 261-539 |
Cow position: | chr9:2637177-2637454 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 193 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 114, 59 |
Conread position: | 264-526 |
Cow position: | chr9:42037850-42037586 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 194 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 15, 57 |
Conread position: | 300-521 |
Cow position: | chr9:45751192-45751410 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 153 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 71, 21 |
Conread position: | 305-559 |
Cow position: | chr9:8406074-8406318 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 194 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 45, 23 |
Conread position: | 310-567 |
Cow position: | chr9:12547454-12547198 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 182 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 36, 88 |
Conread position: | 326-571 |
Cow position: | chr9:46657329-46657580 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 26, 93 |
Conread position: | 344-572 |
Cow position: | chr9:5518655-5518882 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 50, 106 |
Conread position: | 359-572 |
Cow position: | chr9:51269973-51269758 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 165 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 18, 67 |
Conread position: | 402-568 |
Cow position: | chr9:22976799-22976964 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 132 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 9, 73 |
Conread position: | 402-572 |
Cow position: | chr9:44944050-44944215 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 403-572 |
Cow position: | chr9:14732394-14732224 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 139 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 5, 128 |
Conread position: | 405-571 |
Cow position: | chr9:12182023-12181863 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 131 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 412-571 |
Cow position: | chr9:24953621-24953777 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 412-572 |
Cow position: | chr9:12198843-12199006 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 21, 74 |
Conread position: | 430-572 |
Cow position: | chr9:4835018-4834878 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 116 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 433-572 |
Cow position: | chr9:6109914-6109781 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 438-571 |
Cow position: | chr9:18570364-18570495 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 109 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 458-572 |
Cow position: | chr9:8779464-8779578 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 95 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 9, 86 |
Show alignments to all cow chromosomes.