Cow genome map

Conread name: rpigcf0_001345.y1

Conread position: 1-143
Cow position: chr1:87934104-87934240 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-320
Cow position: chr1:92996710-92997037 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 176

Conread position: 1-413
Cow position: chr1:52995201-52994799 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 15

Conread position: 1-460
Cow position: chr1:57575588-57576044 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 156

Conread position: 2-166
Cow position: chr1:48301275-48301443 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 2-174
Cow position: chr1:69185563-69185720 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 50

Conread position: 2-179
Cow position: chr1:83783754-83783933 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 158

Conread position: 2-208
Cow position: chr1:17056165-17055962 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 75

Conread position: 2-264
Cow position: chr1:75250287-75250029 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 2-283
Cow position: chr1:71350549-71350824 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 159

Conread position: 2-317
Cow position: chr1:64302074-64302383 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 53

Conread position: 2-407
Cow position: chr1:48581306-48580913 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 80

Conread position: 2-410
Cow position: chr1:98360232-98360630 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 23

Conread position: 2-413
Cow position: chr1:50930805-50931193 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 128

Conread position: 2-413
Cow position: chr1:71253389-71253779 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 12

Conread position: 2-462
Cow position: chr1:21577984-21577523 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 71

Conread position: 3-205
Cow position: chr1:8670943-8670745 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 23

Conread position: 4-153
Cow position: chr1:49297824-49297672 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 4-235
Cow position: chr1:97717403-97717630 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 4-283
Cow position: chr1:42541765-42541495 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 47

Conread position: 4-347
Cow position: chr1:24581742-24581418 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 4-383
Cow position: chr1:24542397-24542776 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 152

Conread position: 4-413
Cow position: chr1:61741790-61742191 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 127

Conread position: 4-460
Cow position: chr1:82880804-82880383 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 35

Conread position: 5-95
Cow position: chr1:43052330-43052422 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 82
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 5-116
Cow position: chr1:1799204-1799088 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 99
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 5-152
Cow position: chr1:31630111-31630265 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 5-152
Cow position: chr1:69378426-69378577 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 76

Conread position: 5-153
Cow position: chr1:40303720-40303572 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-153
Cow position: chr1:56913360-56913508 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-160
Cow position: chr1:102730585-102730746 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 147

Conread position: 5-165
Cow position: chr1:71636156-71636314 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 134
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 31, 47

Conread position: 5-183
Cow position: chr1:95153046-95152864 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 156

Conread position: 5-197
Cow position: chr1:83093035-83092854 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 121

Conread position: 5-288
Cow position: chr1:4391096-4391389 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 164

Conread position: 5-292
Cow position: chr1:79135451-79135167 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 67

Conread position: 5-309
Cow position: chr1:72105575-72105286 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 5-310
Cow position: chr1:100324586-100324871 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 5-315
Cow position: chr1:78838959-78838665 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 5-321
Cow position: chr1:47886308-47886628 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 149

Conread position: 5-331
Cow position: chr1:22526046-22525730 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 5-332
Cow position: chr1:31272278-31272591 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-333
Cow position: chr1:23186630-23186948 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 229
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 282, 113

Conread position: 5-335
Cow position: chr1:76612960-76613285 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 156

Conread position: 5-346
Cow position: chr1:51417936-51417612 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 227
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 5-353
Cow position: chr1:86110570-86110903 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 121

Conread position: 5-391
Cow position: chr1:28563389-28563771 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 124

Conread position: 5-398
Cow position: chr1:679433-679821 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 260
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 81

Conread position: 5-398
Cow position: chr1:75383135-75382782 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 5-407
Cow position: chr1:68817628-68818016 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 131

Conread position: 5-413
Cow position: chr1:29935219-29935606 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 5-413
Cow position: chr1:43505696-43505299 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 5-413
Cow position: chr1:44507140-44506744 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 50

Conread position: 5-413
Cow position: chr1:72011650-72012028 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 46

Conread position: 5-413
Cow position: chr1:100762246-100761867 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 137

Conread position: 5-420
Cow position: chr1:21954055-21954449 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 62

Conread position: 5-439
Cow position: chr1:22836577-22836141 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 302
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 84

Conread position: 5-460
Cow position: chr1:24132891-24133337 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 126

Conread position: 5-460
Cow position: chr1:56225641-56225196 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 5-460
Cow position: chr1:91065985-91066430 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 46

Conread position: 5-462
Cow position: chr1:7740114-7739689 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 305
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 392, 46

Conread position: 5-462
Cow position: chr1:13547808-13548274 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 71

Conread position: 5-462
Cow position: chr1:53374602-53374150 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 99

Conread position: 5-462
Cow position: chr1:63434626-63435087 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 161

Conread position: 5-462
Cow position: chr1:102266098-102266555 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 318
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 46, 57

Conread position: 6-113
Cow position: chr1:70476582-70476690 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 72

Conread position: 6-116
Cow position: chr1:39095659-39095546 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 99
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 6-116
Cow position: chr1:50906510-50906622 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 99
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 6-121
Cow position: chr1:80423561-80423679 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 104
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 6-121
Cow position: chr1:95976504-95976386 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 6-122
Cow position: chr1:99031805-99031927 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 69

Conread position: 6-125
Cow position: chr1:3034034-3034150 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 8

Conread position: 6-125
Cow position: chr1:81615824-81615703 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 6-126
Cow position: chr1:23101845-23101723 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 6-132
Cow position: chr1:30028061-30028190 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 6-135
Cow position: chr1:51968701-51968576 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 6-136
Cow position: chr1:10470593-10470464 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 6-136
Cow position: chr1:53456982-53456849 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 34, 112

Conread position: 6-136
Cow position: chr1:77810591-77810721 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 111
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 6-137
Cow position: chr1:19384286-19384419 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 6-138
Cow position: chr1:41022587-41022455 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 6-138
Cow position: chr1:84787431-84787306 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 6-138
Cow position: chr1:92363499-92363627 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 6-138
Cow position: chr1:101788926-101789057 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 46

Conread position: 6-141
Cow position: chr1:79169979-79170120 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 6-143
Cow position: chr1:53474319-53474188 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 6-148
Cow position: chr1:75227154-75227293 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 6-148
Cow position: chr1:98742187-98742048 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 110

Conread position: 6-149
Cow position: chr1:1802341-1802192 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 6-150
Cow position: chr1:67674437-67674579 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 54

Conread position: 6-150
Cow position: chr1:90820309-90820451 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 108

Conread position: 6-151
Cow position: chr1:731796-731950 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 6-151
Cow position: chr1:29671048-29671201 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 6-151
Cow position: chr1:63461049-63460901 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 6-152
Cow position: chr1:23373032-23372881 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 6-152
Cow position: chr1:28354716-28354579 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 6-152
Cow position: chr1:53651150-53651009 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 72

Conread position: 6-152
Cow position: chr1:68730175-68730023 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 132

Conread position: 6-152
Cow position: chr1:76474388-76474535 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 21

Conread position: 6-152
Cow position: chr1:90595406-90595548 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 6-152
Cow position: chr1:91743292-91743437 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 124

Conread position: 6-152
Cow position: chr1:100812126-100812269 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 44

Conread position: 6-153
Cow position: chr1:5872603-5872758 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 6-153
Cow position: chr1:19599189-19599340 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 80

Conread position: 6-153
Cow position: chr1:31256059-31256205 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 50

Conread position: 6-153
Cow position: chr1:32035540-32035689 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 6-153
Cow position: chr1:54569872-54569719 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 6-153
Cow position: chr1:63905093-63905238 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 6-153
Cow position: chr1:69532355-69532502 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 6-153
Cow position: chr1:70416589-70416739 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 6-153
Cow position: chr1:78793832-78793982 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 6-153
Cow position: chr1:84595062-84594909 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 6-153
Cow position: chr1:87149645-87149794 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 6-153
Cow position: chr1:89297937-89298089 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 98

Conread position: 6-153
Cow position: chr1:89301546-89301698 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 98

Conread position: 6-153
Cow position: chr1:98556947-98557098 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 6-155
Cow position: chr1:11708853-11708999 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 56

Conread position: 6-157
Cow position: chr1:45099927-45099776 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 55

Conread position: 6-157
Cow position: chr1:70044515-70044370 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 135, 43

Conread position: 6-160
Cow position: chr1:81638713-81638562 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 6-165
Cow position: chr1:95049692-95049855 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 144

Conread position: 6-169
Cow position: chr1:70483164-70483327 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 149

Conread position: 6-171
Cow position: chr1:25021907-25022070 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 147, 0

Conread position: 6-172
Cow position: chr1:63994384-63994552 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 152

Conread position: 6-172
Cow position: chr1:85339548-85339391 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 6-173
Cow position: chr1:30949156-30948995 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 6-175
Cow position: chr1:32014362-32014199 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 6-176
Cow position: chr1:23633756-23633932 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 6-177
Cow position: chr1:38055333-38055502 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 149, 0

Conread position: 6-178
Cow position: chr1:7966018-7965851 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 126

Conread position: 6-179
Cow position: chr1:95156794-95156967 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 137

Conread position: 6-181
Cow position: chr1:6381947-6381767 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 96

Conread position: 6-181
Cow position: chr1:40212178-40212337 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 6-181
Cow position: chr1:99605018-99605192 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 148

Conread position: 6-182
Cow position: chr1:11488985-11489167 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 144

Conread position: 6-183
Cow position: chr1:51860393-51860568 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 0

Conread position: 6-183
Cow position: chr1:61011346-61011174 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 6-185
Cow position: chr1:8788463-8788282 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 151

Conread position: 6-185
Cow position: chr1:22461068-22461247 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 78

Conread position: 6-186
Cow position: chr1:101439316-101439492 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 86

Conread position: 6-188
Cow position: chr1:6031798-6031612 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 84

Conread position: 6-190
Cow position: chr1:759242-759432 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 155

Conread position: 6-192
Cow position: chr1:45315460-45315652 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 146

Conread position: 6-192
Cow position: chr1:90267895-90267705 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 163

Conread position: 6-193
Cow position: chr1:69940653-69940840 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 151

Conread position: 6-193
Cow position: chr1:102648451-102648261 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 154

Conread position: 6-194
Cow position: chr1:53452693-53452519 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 6-196
Cow position: chr1:20871385-20871579 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 155

Conread position: 6-197
Cow position: chr1:93590416-93590607 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 149

Conread position: 6-198
Cow position: chr1:66752461-66752651 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 147, 0

Conread position: 6-198
Cow position: chr1:72422235-72422430 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 112

Conread position: 6-198
Cow position: chr1:95835624-95835820 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 144

Conread position: 6-198
Cow position: chr1:98912179-98911986 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 23, 66

Conread position: 6-198
Cow position: chr1:100823211-100823015 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 158

Conread position: 6-199
Cow position: chr1:30983321-30983515 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 134

Conread position: 6-199
Cow position: chr1:85818423-85818228 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 80

Conread position: 6-199
Cow position: chr1:98897517-98897717 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 172

Conread position: 6-200
Cow position: chr1:81858730-81858926 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 152

Conread position: 6-200
Cow position: chr1:95618812-95618618 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 151

Conread position: 6-200
Cow position: chr1:97144300-97144487 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 46

Conread position: 6-200
Cow position: chr1:102768349-102768157 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 138

Conread position: 6-203
Cow position: chr1:100852878-100852682 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 18

Conread position: 6-204
Cow position: chr1:852344-852143 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 144

Conread position: 6-204
Cow position: chr1:1496356-1496562 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 157

Conread position: 6-204
Cow position: chr1:41027243-41027047 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 136

Conread position: 6-204
Cow position: chr1:49980879-49980682 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 117

Conread position: 6-204
Cow position: chr1:88360056-88359849 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 159

Conread position: 6-205
Cow position: chr1:73721535-73721331 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 67

Conread position: 6-206
Cow position: chr1:242723-242529 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 6-206
Cow position: chr1:6731350-6731151 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 151

Conread position: 6-208
Cow position: chr1:62034664-62034860 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 16

Conread position: 6-208
Cow position: chr1:96019402-96019198 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 82

Conread position: 6-209
Cow position: chr1:38419199-38418993 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 157

Conread position: 6-209
Cow position: chr1:63530730-63530526 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 158

Conread position: 6-212
Cow position: chr1:500347-500140 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 142

Conread position: 6-213
Cow position: chr1:82538098-82537901 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 122

Conread position: 6-214
Cow position: chr1:89158534-89158738 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 91

Conread position: 6-217
Cow position: chr1:67654151-67654363 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 55, 139

Conread position: 6-222
Cow position: chr1:85772177-85771968 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 50

Conread position: 6-225
Cow position: chr1:43286505-43286300 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 6-225
Cow position: chr1:81391093-81390873 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 102

Conread position: 6-225
Cow position: chr1:97833868-97833666 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 6-226
Cow position: chr1:71789977-71790194 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 22

Conread position: 6-236
Cow position: chr1:70175370-70175596 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 56

Conread position: 6-236
Cow position: chr1:79630749-79630969 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 11

Conread position: 6-236
Cow position: chr1:81481214-81481439 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 6-238
Cow position: chr1:37695732-37695966 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 41

Conread position: 6-239
Cow position: chr1:77739895-77739658 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 81

Conread position: 6-239
Cow position: chr1:79718979-79718743 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 81

Conread position: 6-242
Cow position: chr1:22035779-22035548 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 219, 149

Conread position: 6-242
Cow position: chr1:62235285-62235508 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 38

Conread position: 6-243
Cow position: chr1:48618076-48618301 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 140, 0

Conread position: 6-243
Cow position: chr1:101507521-101507296 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 221, 21

Conread position: 6-245
Cow position: chr1:33998920-33998693 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 6-245
Cow position: chr1:46143297-46143526 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 39

Conread position: 6-246
Cow position: chr1:54267769-54267998 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 101

Conread position: 6-249
Cow position: chr1:52139457-52139700 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 11

Conread position: 6-257
Cow position: chr1:35671707-35671466 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 237, 122

Conread position: 6-258
Cow position: chr1:37726243-37726497 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 142

Conread position: 6-258
Cow position: chr1:56225953-56225711 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 47

Conread position: 6-258
Cow position: chr1:57089507-57089761 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 91

Conread position: 6-259
Cow position: chr1:98467973-98467730 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 136

Conread position: 6-260
Cow position: chr1:98583919-98583679 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 6-261
Cow position: chr1:53402955-53402702 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 157

Conread position: 6-262
Cow position: chr1:37124298-37124045 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 75, 33

Conread position: 6-262
Cow position: chr1:62997972-62997721 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 130

Conread position: 6-264
Cow position: chr1:17875542-17875793 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 76

Conread position: 6-264
Cow position: chr1:100474410-100474149 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 157

Conread position: 6-267
Cow position: chr1:69227278-69227535 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 196, 46

Conread position: 6-268
Cow position: chr1:49824894-49825156 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 196

Conread position: 6-268
Cow position: chr1:71665763-71666019 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 83

Conread position: 6-276
Cow position: chr1:628139-627867 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 61

Conread position: 6-280
Cow position: chr1:102305976-102306243 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 103

Conread position: 6-281
Cow position: chr1:22943857-22944125 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 121

Conread position: 6-282
Cow position: chr1:78066372-78066642 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 46

Conread position: 6-282
Cow position: chr1:82513181-82513456 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 70

Conread position: 6-282
Cow position: chr1:102754022-102753754 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 149, 31

Conread position: 6-283
Cow position: chr1:22824080-22823804 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 156

Conread position: 6-283
Cow position: chr1:31794835-31795104 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 132

Conread position: 6-283
Cow position: chr1:42482370-42482102 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 98

Conread position: 6-283
Cow position: chr1:46031134-46030858 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 166

Conread position: 6-284
Cow position: chr1:81477692-81477972 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 48, 140

Conread position: 6-292
Cow position: chr1:27463299-27463021 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 0

Conread position: 6-292
Cow position: chr1:65028692-65028419 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 28

Conread position: 6-292
Cow position: chr1:98060230-98059939 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 138

Conread position: 6-295
Cow position: chr1:78794065-78794338 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 6-295
Cow position: chr1:100575870-100576156 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 207, 119

Conread position: 6-296
Cow position: chr1:41137977-41138246 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 6-296
Cow position: chr1:69551308-69551598 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 70

Conread position: 6-301
Cow position: chr1:261293-261598 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 16

Conread position: 6-301
Cow position: chr1:84103887-84104173 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 155

Conread position: 6-304
Cow position: chr1:43311597-43311898 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 156

Conread position: 6-304
Cow position: chr1:47790497-47790786 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 35, 97

Conread position: 6-313
Cow position: chr1:26934097-26934392 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 71

Conread position: 6-313
Cow position: chr1:79640118-79640421 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 150

Conread position: 6-319
Cow position: chr1:4243159-4243480 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 89

Conread position: 6-319
Cow position: chr1:64572685-64572376 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 151

Conread position: 6-320
Cow position: chr1:39224768-39225063 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 210, 37

Conread position: 6-320
Cow position: chr1:89449069-89448759 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 6-325
Cow position: chr1:2975818-2976138 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 177

Conread position: 6-326
Cow position: chr1:8128807-8129111 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 6-327
Cow position: chr1:20950888-20950576 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 144

Conread position: 6-327
Cow position: chr1:91023295-91023613 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 152

Conread position: 6-331
Cow position: chr1:96304801-96305127 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 208, 151

Conread position: 6-332
Cow position: chr1:19970421-19970751 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 215
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 35, 154

Conread position: 6-335
Cow position: chr1:62519537-62519204 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 78

Conread position: 6-335
Cow position: chr1:76740501-76740837 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 80

Conread position: 6-335
Cow position: chr1:86682396-86682716 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 71

Conread position: 6-335
Cow position: chr1:87197991-87197674 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 150

Conread position: 6-336
Cow position: chr1:17196454-17196783 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 6-337
Cow position: chr1:22192941-22192608 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 139

Conread position: 6-337
Cow position: chr1:42545611-42545939 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 192, 138

Conread position: 6-341
Cow position: chr1:88913491-88913158 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 117

Conread position: 6-342
Cow position: chr1:97090489-97090166 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 21

Conread position: 6-346
Cow position: chr1:484292-484630 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 36, 145

Conread position: 6-346
Cow position: chr1:5479487-5479851 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 81

Conread position: 6-346
Cow position: chr1:16060837-16061183 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 195, 55

Conread position: 6-346
Cow position: chr1:38754088-38753753 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 279, 47

Conread position: 6-346
Cow position: chr1:96276882-96277219 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 127

Conread position: 6-347
Cow position: chr1:87095040-87095396 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 83

Conread position: 6-347
Cow position: chr1:89388514-89388170 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 201

Conread position: 6-348
Cow position: chr1:70344218-70343875 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 234
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 82

Conread position: 6-351
Cow position: chr1:78079894-78079557 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 158

Conread position: 6-363
Cow position: chr1:44075554-44075888 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 279, 18

Conread position: 6-371
Cow position: chr1:5597041-5597383 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 141

Conread position: 6-374
Cow position: chr1:31607715-31608084 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 82

Conread position: 6-374
Cow position: chr1:33206703-33207060 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 43, 165

Conread position: 6-374
Cow position: chr1:54156563-54156926 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 126

Conread position: 6-374
Cow position: chr1:71228266-71227891 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 131

Conread position: 6-377
Cow position: chr1:7748389-7748024 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 48, 163

Conread position: 6-377
Cow position: chr1:7752553-7752190 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 161

Conread position: 6-377
Cow position: chr1:83072613-83072255 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 156

Conread position: 6-381
Cow position: chr1:55428782-55429158 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 157

Conread position: 6-396
Cow position: chr1:10518858-10519251 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 260
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 78

Conread position: 6-397
Cow position: chr1:21955201-21955582 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 68

Conread position: 6-398
Cow position: chr1:68863190-68862826 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 257, 37

Conread position: 6-399
Cow position: chr1:41289608-41289973 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 67, 78

Conread position: 6-399
Cow position: chr1:99512091-99512463 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 266
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 93

Conread position: 6-402
Cow position: chr1:42175899-42175506 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 176

Conread position: 6-404
Cow position: chr1:74955861-74956239 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 32

Conread position: 6-406
Cow position: chr1:8287459-8287831 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 41, 78

Conread position: 6-408
Cow position: chr1:6304706-6305088 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 35

Conread position: 6-408
Cow position: chr1:15334059-15333661 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 136

Conread position: 6-411
Cow position: chr1:21787495-21787104 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 6-411
Cow position: chr1:49317330-49317735 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 64

Conread position: 6-411
Cow position: chr1:70538777-70538381 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 6-411
Cow position: chr1:71078791-71079179 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 62

Conread position: 6-411
Cow position: chr1:74084017-74084414 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 125

Conread position: 6-411
Cow position: chr1:74929537-74929942 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 273
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 78

Conread position: 6-411
Cow position: chr1:89381445-89381056 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 6-412
Cow position: chr1:70227520-70227925 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 282
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 31, 78

Conread position: 6-412
Cow position: chr1:88926208-88926603 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 261
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 78

Conread position: 6-412
Cow position: chr1:93528865-93528467 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 37

Conread position: 6-412
Cow position: chr1:97820854-97820462 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 32, 82

Conread position: 6-413
Cow position: chr1:1956163-1956553 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 94

Conread position: 6-413
Cow position: chr1:16766915-16767309 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 141

Conread position: 6-413
Cow position: chr1:19481928-19482297 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 6-413
Cow position: chr1:19516225-19516629 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 99

Conread position: 6-413
Cow position: chr1:22827317-22826945 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 42

Conread position: 6-413
Cow position: chr1:34159999-34159607 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 37

Conread position: 6-413
Cow position: chr1:42887109-42887487 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 6-413
Cow position: chr1:43388883-43389272 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 29

Conread position: 6-413
Cow position: chr1:45019635-45020028 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 6-413
Cow position: chr1:51394589-51394195 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 290
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 141

Conread position: 6-413
Cow position: chr1:53370257-53369842 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 141

Conread position: 6-413
Cow position: chr1:53398144-53397763 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 149

Conread position: 6-413
Cow position: chr1:54478487-54478100 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 6-413
Cow position: chr1:55705076-55705478 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 10

Conread position: 6-413
Cow position: chr1:59519082-59518677 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 62

Conread position: 6-413
Cow position: chr1:61005389-61005790 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 118

Conread position: 6-413
Cow position: chr1:61564952-61564568 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 100

Conread position: 6-413
Cow position: chr1:61885083-61884691 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 134

Conread position: 6-413
Cow position: chr1:62964439-62964055 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 152

Conread position: 6-413
Cow position: chr1:64803926-64804332 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 157

Conread position: 6-413
Cow position: chr1:69678153-69678550 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 116

Conread position: 6-413
Cow position: chr1:70435157-70434769 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 47

Conread position: 6-413
Cow position: chr1:75745034-75744636 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 153

Conread position: 6-413
Cow position: chr1:78857155-78857547 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 6-413
Cow position: chr1:81515410-81515015 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 277
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 158

Conread position: 6-413
Cow position: chr1:82337610-82338008 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 138

Conread position: 6-413
Cow position: chr1:84811770-84812161 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 56

Conread position: 6-413
Cow position: chr1:92197628-92197236 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 6-413
Cow position: chr1:100400033-100400426 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 40

Conread position: 6-413
Cow position: chr1:100552137-100551746 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 42

Conread position: 6-413
Cow position: chr1:102785116-102784736 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 6-420
Cow position: chr1:3923633-3924025 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 6-420
Cow position: chr1:10633212-10632822 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 6-420
Cow position: chr1:37321840-37322236 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 6-427
Cow position: chr1:49433090-49433506 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 155

Conread position: 6-434
Cow position: chr1:6166403-6165995 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 202, 49

Conread position: 6-435
Cow position: chr1:71119692-71119264 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 73

Conread position: 6-439
Cow position: chr1:196835-197263 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 65

Conread position: 6-439
Cow position: chr1:71295128-71295569 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 33

Conread position: 6-448
Cow position: chr1:13637494-13637937 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 57

Conread position: 6-451
Cow position: chr1:20000585-20001022 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 307
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 400, 39

Conread position: 6-452
Cow position: chr1:89509757-89510206 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 43

Conread position: 6-454
Cow position: chr1:12464495-12464929 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 149

Conread position: 6-454
Cow position: chr1:22729226-22728772 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 147

Conread position: 6-454
Cow position: chr1:38277855-38278324 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 6-454
Cow position: chr1:99609538-99609090 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 124

Conread position: 6-456
Cow position: chr1:97954312-97954726 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 41

Conread position: 6-459
Cow position: chr1:54258740-54258287 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 105

Conread position: 6-459
Cow position: chr1:81290675-81290240 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 57

Conread position: 6-459
Cow position: chr1:90621335-90621775 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 6-460
Cow position: chr1:11729342-11728911 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 6-460
Cow position: chr1:26895641-26896107 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 151

Conread position: 6-460
Cow position: chr1:35162576-35162122 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 14

Conread position: 6-460
Cow position: chr1:43352482-43352931 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 143

Conread position: 6-460
Cow position: chr1:48444020-48444460 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 323
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 39, 155

Conread position: 6-460
Cow position: chr1:52435446-52434986 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 143

Conread position: 6-460
Cow position: chr1:53623125-53622686 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 79

Conread position: 6-460
Cow position: chr1:68845335-68845762 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 44

Conread position: 6-460
Cow position: chr1:68855337-68854900 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 144

Conread position: 6-460
Cow position: chr1:72304226-72304652 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 26

Conread position: 6-460
Cow position: chr1:77720089-77720509 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 403, 37

Conread position: 6-460
Cow position: chr1:81228164-81228613 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 77

Conread position: 6-460
Cow position: chr1:81568858-81569318 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 149

Conread position: 6-460
Cow position: chr1:86113225-86113695 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 80

Conread position: 6-460
Cow position: chr1:95499325-95499777 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 150

Conread position: 6-460
Cow position: chr1:96365822-96365392 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 334, 29

Conread position: 6-460
Cow position: chr1:101714287-101713832 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 120

Conread position: 6-462
Cow position: chr1:8789-8338 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 144

Conread position: 6-462
Cow position: chr1:3324045-3323570 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 82

Conread position: 6-462
Cow position: chr1:18936666-18937117 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 79

Conread position: 6-462
Cow position: chr1:21093290-21092808 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 320
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 86

Conread position: 6-462
Cow position: chr1:29626739-29627199 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 319
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 77

Conread position: 6-462
Cow position: chr1:31348264-31348716 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 82

Conread position: 6-462
Cow position: chr1:31934675-31934229 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 71

Conread position: 6-462
Cow position: chr1:36880458-36879994 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 319
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 68, 206

Conread position: 6-462
Cow position: chr1:41182007-41181557 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 36

Conread position: 6-462
Cow position: chr1:42256332-42256794 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 74

Conread position: 6-462
Cow position: chr1:52496944-52496492 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 332
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 42, 78

Conread position: 6-462
Cow position: chr1:68618764-68619203 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 63

Conread position: 6-462
Cow position: chr1:72034755-72035213 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 21

Conread position: 6-462
Cow position: chr1:72068660-72069111 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 156

Conread position: 6-462
Cow position: chr1:76019526-76019964 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 106

Conread position: 6-462
Cow position: chr1:77620720-77620262 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 73

Conread position: 6-462
Cow position: chr1:82936433-82936866 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 51

Conread position: 6-462
Cow position: chr1:84283247-84282777 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 324
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 78

Conread position: 6-462
Cow position: chr1:87888561-87888122 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 325
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 63

Conread position: 6-462
Cow position: chr1:96964490-96964035 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 6-462
Cow position: chr1:97755672-97755242 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 311
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 58

Conread position: 7-132
Cow position: chr1:93235762-93235888 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 75

Conread position: 7-136
Cow position: chr1:51794497-51794625 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 44

Conread position: 7-139
Cow position: chr1:46354270-46354404 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 7-146
Cow position: chr1:4512149-4512011 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 7-150
Cow position: chr1:81471521-81471379 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 7-151
Cow position: chr1:73494421-73494573 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 7-151
Cow position: chr1:100800599-100800746 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 7-152
Cow position: chr1:4329739-4329878 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 7-153
Cow position: chr1:77685808-77685960 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 7-156
Cow position: chr1:32217408-32217260 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 7-168
Cow position: chr1:55685808-55685970 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 137
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 149

Conread position: 7-176
Cow position: chr1:100573458-100573627 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 150

Conread position: 7-183
Cow position: chr1:86687991-86688163 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 7-184
Cow position: chr1:4582723-4582543 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 127

Conread position: 7-185
Cow position: chr1:68688749-68688574 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 146
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 49

Conread position: 7-195
Cow position: chr1:49334219-49334411 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 82

Conread position: 7-198
Cow position: chr1:38706682-38706876 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 59

Conread position: 7-200
Cow position: chr1:83024995-83025188 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 56

Conread position: 7-201
Cow position: chr1:63079172-63078985 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 7-205
Cow position: chr1:6854146-6854334 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 189, 33

Conread position: 7-225
Cow position: chr1:102529683-102529900 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 101

Conread position: 7-238
Cow position: chr1:64113630-64113851 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 81, 36

Conread position: 7-252
Cow position: chr1:2972090-2971840 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 143

Conread position: 7-254
Cow position: chr1:71770136-71770392 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 154

Conread position: 7-267
Cow position: chr1:45223746-45223492 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 246, 46

Conread position: 7-272
Cow position: chr1:89157960-89158218 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 7-310
Cow position: chr1:11172538-11172246 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 73

Conread position: 7-331
Cow position: chr1:65318747-65318426 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 75

Conread position: 7-333
Cow position: chr1:101834990-101834673 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 143

Conread position: 7-346
Cow position: chr1:84905890-84906232 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 85

Conread position: 7-347
Cow position: chr1:92580929-92580599 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 77

Conread position: 7-348
Cow position: chr1:83659105-83659439 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 228
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 85

Conread position: 7-358
Cow position: chr1:78097096-78096762 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 148

Conread position: 7-374
Cow position: chr1:49082916-49082537 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 154

Conread position: 7-377
Cow position: chr1:42398026-42398385 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 261
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 82, 42

Conread position: 7-382
Cow position: chr1:58754628-58754978 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 21

Conread position: 7-392
Cow position: chr1:72104024-72103643 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 86

Conread position: 7-412
Cow position: chr1:4691758-4691369 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 267
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 41, 122

Conread position: 7-412
Cow position: chr1:34856455-34856852 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 7-413
Cow position: chr1:101634869-101634477 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 42

Conread position: 7-413
Cow position: chr1:102349589-102349982 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 17

Conread position: 7-419
Cow position: chr1:70422477-70422070 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 278
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 81

Conread position: 7-421
Cow position: chr1:4539249-4539671 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 275
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 85

Conread position: 7-421
Cow position: chr1:73584235-73584634 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 31, 87

Conread position: 7-434
Cow position: chr1:43357836-43358260 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 290
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 42, 146

Conread position: 7-455
Cow position: chr1:73545738-73546192 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 312
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 31, 177

Conread position: 7-456
Cow position: chr1:99642199-99642649 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 57

Conread position: 7-457
Cow position: chr1:40600196-40599773 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 41

Conread position: 7-460
Cow position: chr1:15547635-15547187 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 46

Conread position: 8-120
Cow position: chr1:92578665-92578779 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 8-122
Cow position: chr1:64811406-64811287 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 8-156
Cow position: chr1:62469227-62469079 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 121

Conread position: 8-264
Cow position: chr1:90904588-90904836 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 138

Conread position: 8-306
Cow position: chr1:20104435-20104144 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 148

Conread position: 8-342
Cow position: chr1:80311626-80311310 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 187, 60

Conread position: 8-374
Cow position: chr1:61012475-61012124 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 62

Conread position: 8-410
Cow position: chr1:98031086-98030693 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 35

Conread position: 8-412
Cow position: chr1:56618487-56618903 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 101

Conread position: 8-413
Cow position: chr1:1980940-1981334 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 154

Conread position: 8-413
Cow position: chr1:6941635-6941241 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 8-413
Cow position: chr1:6959048-6958654 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 8-413
Cow position: chr1:25383838-25383438 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 149

Conread position: 8-413
Cow position: chr1:78811207-78810811 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 149

Conread position: 8-459
Cow position: chr1:53458867-53458424 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 8-460
Cow position: chr1:41056849-41056402 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 150

Conread position: 8-460
Cow position: chr1:41697222-41696779 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 41

Conread position: 8-460
Cow position: chr1:54206650-54207098 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 9-132
Cow position: chr1:21957386-21957505 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 9-169
Cow position: chr1:524974-524814 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 56

Conread position: 9-169
Cow position: chr1:71945911-71946077 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 140

Conread position: 9-176
Cow position: chr1:87220619-87220460 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 9-183
Cow position: chr1:101280569-101280741 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 120

Conread position: 9-196
Cow position: chr1:24530666-24530482 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 144, 0

Conread position: 9-331
Cow position: chr1:55753051-55753373 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 145

Conread position: 10-122
Cow position: chr1:42292093-42291977 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 10-128
Cow position: chr1:54645599-54645473 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 10-140
Cow position: chr1:22828406-22828536 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-149
Cow position: chr1:89835877-89835742 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 10-151
Cow position: chr1:45449464-45449327 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 10-151
Cow position: chr1:82917307-82917450 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 134

Conread position: 10-151
Cow position: chr1:91810912-91810771 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 132

Conread position: 10-153
Cow position: chr1:20537369-20537226 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-153
Cow position: chr1:82505169-82505026 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 72

Conread position: 10-182
Cow position: chr1:101525753-101525931 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 153

Conread position: 10-198
Cow position: chr1:36688209-36688400 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 75

Conread position: 10-208
Cow position: chr1:67529223-67529023 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 138

Conread position: 10-216
Cow position: chr1:31819270-31819073 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 13

Conread position: 10-216
Cow position: chr1:83606280-83606488 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 136

Conread position: 10-231
Cow position: chr1:99322400-99322619 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 177, 24

Conread position: 10-238
Cow position: chr1:52662007-52662231 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 48

Conread position: 10-244
Cow position: chr1:48206370-48206598 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 10-264
Cow position: chr1:73457927-73458176 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 153

Conread position: 10-267
Cow position: chr1:74751461-74751720 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 78

Conread position: 10-282
Cow position: chr1:55819205-55818961 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 10-282
Cow position: chr1:67585718-67585448 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 34

Conread position: 10-283
Cow position: chr1:10617058-10616779 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 115

Conread position: 10-292
Cow position: chr1:635517-635795 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 76

Conread position: 10-320
Cow position: chr1:43855456-43855162 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 303, 34

Conread position: 10-326
Cow position: chr1:24534094-24534398 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 10-333
Cow position: chr1:70829066-70828752 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 10-337
Cow position: chr1:33409456-33409783 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 80

Conread position: 10-337
Cow position: chr1:91811949-91811631 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 139

Conread position: 10-337
Cow position: chr1:101866333-101866652 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 11

Conread position: 10-342
Cow position: chr1:14205993-14206316 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 42

Conread position: 10-346
Cow position: chr1:20667581-20667906 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 10-346
Cow position: chr1:75933433-75933108 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 135

Conread position: 10-406
Cow position: chr1:26178641-26179032 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 140

Conread position: 10-410
Cow position: chr1:45555533-45555139 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 70

Conread position: 10-411
Cow position: chr1:10941931-10942314 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 72

Conread position: 10-411
Cow position: chr1:10964455-10964072 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 72

Conread position: 10-413
Cow position: chr1:51446050-51445655 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 59

Conread position: 10-413
Cow position: chr1:55230140-55229760 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 145

Conread position: 10-413
Cow position: chr1:56477752-56477370 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 10-413
Cow position: chr1:97611497-97611877 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 10-423
Cow position: chr1:69694831-69695243 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 33

Conread position: 10-432
Cow position: chr1:68826754-68827149 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 275, 36

Conread position: 10-454
Cow position: chr1:22730900-22730486 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 321
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 44, 147

Conread position: 10-460
Cow position: chr1:635364-634909 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 82

Conread position: 10-460
Cow position: chr1:10778725-10778291 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 41

Conread position: 10-460
Cow position: chr1:53521081-53520630 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 151

Conread position: 10-462
Cow position: chr1:12222437-12222889 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 74

Conread position: 10-462
Cow position: chr1:68217196-68217644 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 319
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 29, 82

Conread position: 10-462
Cow position: chr1:73960860-73960416 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 404, 28

Conread position: 10-462
Cow position: chr1:92370201-92370643 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 318
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 80

Conread position: 11-153
Cow position: chr1:52450932-52450792 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 11-460
Cow position: chr1:36998349-36997915 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 134

Conread position: 11-460
Cow position: chr1:69539851-69539415 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 47

Conread position: 12-165
Cow position: chr1:50585711-50585867 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 146

Conread position: 12-216
Cow position: chr1:3942052-3942254 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 31, 66

Conread position: 12-374
Cow position: chr1:724906-724549 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 147

Conread position: 14-201
Cow position: chr1:27959401-27959575 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 14-202
Cow position: chr1:40935608-40935793 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 11

Conread position: 14-216
Cow position: chr1:3965999-3965796 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 27, 119

Conread position: 14-295
Cow position: chr1:51044145-51044418 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 33, 86

Conread position: 16-196
Cow position: chr1:95676133-95676309 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 45

Conread position: 16-369
Cow position: chr1:18780172-18780518 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 9

Conread position: 16-460
Cow position: chr1:45007625-45007184 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 309
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 84, 19

Conread position: 17-149
Cow position: chr1:6230106-6229973 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 34, 13

Conread position: 17-152
Cow position: chr1:1380160-1380019 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 17-158
Cow position: chr1:42353311-42353177 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 17-199
Cow position: chr1:19962209-19962029 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 148
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 117

Conread position: 17-264
Cow position: chr1:61846312-61846063 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 78

Conread position: 17-283
Cow position: chr1:37886655-37886911 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 17-413
Cow position: chr1:25281506-25281900 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 26

Conread position: 17-458
Cow position: chr1:11913714-11914152 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 72

Conread position: 17-460
Cow position: chr1:52039793-52039355 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 110

Conread position: 18-153
Cow position: chr1:46004437-46004302 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 18-302
Cow position: chr1:72813778-72813492 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 143

Conread position: 18-460
Cow position: chr1:874816-874361 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 154

Conread position: 19-147
Cow position: chr1:40077949-40077821 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-152
Cow position: chr1:42775068-42774932 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 5

Conread position: 19-168
Cow position: chr1:67539720-67539566 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 118

Conread position: 19-192
Cow position: chr1:2462534-2462367 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 116

Conread position: 19-292
Cow position: chr1:98512080-98511817 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 262, 6

Conread position: 19-346
Cow position: chr1:24777839-24778148 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 5

Conread position: 19-347
Cow position: chr1:57297643-57297308 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 5

Conread position: 19-374
Cow position: chr1:25735029-25734668 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 110

Conread position: 19-413
Cow position: chr1:36875179-36874791 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 32

Conread position: 19-434
Cow position: chr1:34686329-34685939 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 28

Conread position: 20-413
Cow position: chr1:40530944-40531333 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 26, 203

Conread position: 22-238
Cow position: chr1:79146663-79146878 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 12, 99

Conread position: 22-347
Cow position: chr1:65025421-65025096 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 132, 40

Conread position: 22-376
Cow position: chr1:86073748-86073400 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 215
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 272, 133

Conread position: 22-388
Cow position: chr1:32001167-32001520 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 118

Conread position: 22-460
Cow position: chr1:93499774-93499340 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 57

Conread position: 23-160
Cow position: chr1:75080403-75080540 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 74

Conread position: 24-197
Cow position: chr1:808668-808842 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 131

Conread position: 24-239
Cow position: chr1:60901221-60901016 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 18

Conread position: 24-413
Cow position: chr1:47233329-47233699 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 25-348
Cow position: chr1:93554989-93554677 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 135

Conread position: 26-201
Cow position: chr1:98636853-98636680 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 19

Conread position: 27-238
Cow position: chr1:52912751-52912954 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 29-245
Cow position: chr1:8624305-8624513 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 29-331
Cow position: chr1:101267859-101268159 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 172, 106

Conread position: 29-373
Cow position: chr1:86579108-86578764 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 97

Conread position: 29-407
Cow position: chr1:28177150-28176781 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 100

Conread position: 29-413
Cow position: chr1:46218719-46218359 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 131

Conread position: 29-413
Cow position: chr1:47658490-47658129 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 0

Conread position: 29-413
Cow position: chr1:64189651-64189278 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 80

Conread position: 29-459
Cow position: chr1:100800495-100800076 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 13

Conread position: 30-125
Cow position: chr1:8659938-8659843 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 30-410
Cow position: chr1:93044161-93043804 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 30-448
Cow position: chr1:33330947-33331343 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 99

Conread position: 30-452
Cow position: chr1:89341834-89342263 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 295

Conread position: 31-234
Cow position: chr1:49153459-49153263 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 31-292
Cow position: chr1:10716639-10716392 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 97, 0

Conread position: 31-320
Cow position: chr1:85549937-85550216 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 31-460
Cow position: chr1:74822592-74822168 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 32-160
Cow position: chr1:50329635-50329511 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 97

Conread position: 32-320
Cow position: chr1:30047460-30047732 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 81

Conread position: 32-409
Cow position: chr1:98461424-98461070 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 33-265
Cow position: chr1:80841791-80841569 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 125

Conread position: 34-154
Cow position: chr1:39708403-39708283 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 34-354
Cow position: chr1:74928024-74927708 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 263, 121

Conread position: 34-410
Cow position: chr1:19466189-19465841 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 34-456
Cow position: chr1:79844603-79844191 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 17

Conread position: 35-282
Cow position: chr1:92989729-92989489 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 35-396
Cow position: chr1:62036942-62036593 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 119

Conread position: 35-410
Cow position: chr1:92963527-92963177 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 20

Conread position: 35-413
Cow position: chr1:4291305-4290934 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 98

Conread position: 35-460
Cow position: chr1:39417976-39418400 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 48

Conread position: 35-462
Cow position: chr1:52329387-52329812 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 301
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 51

Conread position: 37-171
Cow position: chr1:55110629-55110495 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 15

Conread position: 37-238
Cow position: chr1:84768740-84768936 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 109

Conread position: 37-335
Cow position: chr1:41115582-41115868 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 135, 105

Conread position: 37-403
Cow position: chr1:19885518-19885170 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 37-413
Cow position: chr1:39068817-39069175 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 120

Conread position: 37-460
Cow position: chr1:44768980-44769391 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 31

Conread position: 38-140
Cow position: chr1:11381876-11381774 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 38-153
Cow position: chr1:65909646-65909532 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 38-160
Cow position: chr1:100746712-100746837 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 38-161
Cow position: chr1:99024095-99024216 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 38-173
Cow position: chr1:32857174-32857035 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 38-183
Cow position: chr1:19304706-19304565 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 38-183
Cow position: chr1:45873934-45874085 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 38-183
Cow position: chr1:97750483-97750626 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 0

Conread position: 38-185
Cow position: chr1:10421841-10421699 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 38-192
Cow position: chr1:3417491-3417332 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 38-195
Cow position: chr1:67918893-67918738 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 38-197
Cow position: chr1:68127053-68127211 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 124

Conread position: 38-203
Cow position: chr1:71915984-71916146 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 38-204
Cow position: chr1:19515481-19515648 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 119

Conread position: 38-209
Cow position: chr1:9143854-9143689 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 38-210
Cow position: chr1:92684558-92684727 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 38-211
Cow position: chr1:816274-816443 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 96

Conread position: 38-224
Cow position: chr1:57091114-57090933 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 0

Conread position: 38-242
Cow position: chr1:76657931-76658140 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 174

Conread position: 38-246
Cow position: chr1:86912576-86912374 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 38-248
Cow position: chr1:79004107-79003907 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 38-251
Cow position: chr1:73936008-73936221 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 118

Conread position: 38-252
Cow position: chr1:186145-186347 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 38-258
Cow position: chr1:68672466-68672676 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 0

Conread position: 38-258
Cow position: chr1:77232442-77232650 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 115, 0

Conread position: 38-264
Cow position: chr1:8347259-8347041 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 38-264
Cow position: chr1:50992072-50991852 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 122

Conread position: 38-264
Cow position: chr1:95153358-95153137 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 0

Conread position: 38-273
Cow position: chr1:98576183-98575954 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 117, 0

Conread position: 38-292
Cow position: chr1:81580313-81580066 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 90

Conread position: 38-301
Cow position: chr1:9437154-9437428 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 103, 35

Conread position: 38-308
Cow position: chr1:26894836-26895101 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 121

Conread position: 38-308
Cow position: chr1:78697635-78697898 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 9, 130

Conread position: 38-309
Cow position: chr1:5539140-5539404 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 54

Conread position: 38-310
Cow position: chr1:89786045-89785781 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 264, 96

Conread position: 38-318
Cow position: chr1:41047166-41047436 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 42

Conread position: 38-331
Cow position: chr1:77880599-77880886 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 208
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 174, 22

Conread position: 38-346
Cow position: chr1:68763551-68763846 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 86

Conread position: 38-347
Cow position: chr1:13810782-13810487 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 38-353
Cow position: chr1:45553107-45553402 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 38-373
Cow position: chr1:101837178-101836857 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 247, 123

Conread position: 38-374
Cow position: chr1:92369870-92369543 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 38-408
Cow position: chr1:53671614-53671969 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 109

Conread position: 38-411
Cow position: chr1:34771367-34771726 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 106

Conread position: 38-412
Cow position: chr1:6102767-6103136 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 40

Conread position: 38-412
Cow position: chr1:7186924-7186564 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 48

Conread position: 38-413
Cow position: chr1:26201368-26200996 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 247
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 112, 262

Conread position: 38-413
Cow position: chr1:37706841-37707193 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 88

Conread position: 38-413
Cow position: chr1:51628375-51628726 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 95

Conread position: 38-413
Cow position: chr1:83748079-83747716 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 87

Conread position: 38-413
Cow position: chr1:85162411-85162772 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 38-420
Cow position: chr1:4032768-4032403 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 106

Conread position: 38-420
Cow position: chr1:10655611-10655246 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 30, 46

Conread position: 38-420
Cow position: chr1:20002095-20002467 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 105

Conread position: 38-420
Cow position: chr1:57900588-57900972 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 174

Conread position: 38-432
Cow position: chr1:90864157-90864544 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 37

Conread position: 38-447
Cow position: chr1:63241109-63240678 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 284
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 46

Conread position: 38-451
Cow position: chr1:98551855-98551444 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 377, 38

Conread position: 38-458
Cow position: chr1:42968183-42968594 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 293
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 48

Conread position: 38-459
Cow position: chr1:89835393-89834954 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 290
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 80

Conread position: 38-460
Cow position: chr1:31765237-31765677 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 120

Conread position: 38-460
Cow position: chr1:48105300-48105718 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 77

Conread position: 38-460
Cow position: chr1:48730697-48731106 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 22

Conread position: 38-460
Cow position: chr1:82884259-82884667 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 65

Conread position: 38-460
Cow position: chr1:89741857-89742294 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 124

Conread position: 38-460
Cow position: chr1:90868311-90868720 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 35

Conread position: 38-460
Cow position: chr1:91816635-91817053 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 48

Conread position: 38-462
Cow position: chr1:21508529-21508107 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 287
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 254, 132

Conread position: 38-462
Cow position: chr1:34300413-34300832 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 119

Conread position: 38-462
Cow position: chr1:63390631-63391056 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 48

Conread position: 38-462
Cow position: chr1:63595918-63596345 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 48

Conread position: 38-462
Cow position: chr1:68253731-68253307 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 103

Conread position: 39-169
Cow position: chr1:44269223-44269098 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 29

Conread position: 39-223
Cow position: chr1:31357378-31357553 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 39-243
Cow position: chr1:36578652-36578467 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 39-278
Cow position: chr1:45670767-45670542 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 39-292
Cow position: chr1:80422407-80422170 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 39-298
Cow position: chr1:7023256-7023004 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 39-320
Cow position: chr1:86340333-86340611 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 165, 103

Conread position: 39-331
Cow position: chr1:23512524-23512804 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 53

Conread position: 39-340
Cow position: chr1:98413905-98413608 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 158, 16

Conread position: 39-391
Cow position: chr1:63138978-63138636 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 49

Conread position: 39-409
Cow position: chr1:7971547-7971210 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 188, 118

Conread position: 39-413
Cow position: chr1:65103751-65103412 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 61

Conread position: 39-420
Cow position: chr1:80988481-80988115 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 39-459
Cow position: chr1:53308257-53308673 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 39-459
Cow position: chr1:84255902-84255472 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 114

Conread position: 39-460
Cow position: chr1:4027998-4027579 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 73

Conread position: 40-167
Cow position: chr1:53540708-53540583 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 40-261
Cow position: chr1:3815551-3815775 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 118, 88

Conread position: 40-261
Cow position: chr1:48214024-48214241 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 169, 92

Conread position: 40-283
Cow position: chr1:79660268-79660503 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 40-309
Cow position: chr1:100569290-100569024 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 244, 115

Conread position: 40-342
Cow position: chr1:14308898-14309198 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 47

Conread position: 40-344
Cow position: chr1:3882325-3882627 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 113

Conread position: 40-354
Cow position: chr1:35555049-35554734 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 44

Conread position: 40-413
Cow position: chr1:3962554-3962908 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 15

Conread position: 40-420
Cow position: chr1:96947585-96947925 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 76

Conread position: 41-153
Cow position: chr1:53640845-53640736 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 41-194
Cow position: chr1:45478730-45478877 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 41-194
Cow position: chr1:78067937-78068087 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 41-208
Cow position: chr1:95683242-95683410 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 63, 21

Conread position: 41-213
Cow position: chr1:99221223-99221388 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 41-243
Cow position: chr1:80584562-80584369 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 41-278
Cow position: chr1:77425236-77425006 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 115

Conread position: 41-296
Cow position: chr1:8374323-8374565 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 41-296
Cow position: chr1:72356488-72356244 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 147
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 41-344
Cow position: chr1:85647651-85647944 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 41-346
Cow position: chr1:101632205-101632503 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 0

Conread position: 41-356
Cow position: chr1:90975954-90976260 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 104

Conread position: 41-454
Cow position: chr1:92436856-92437267 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 46

Conread position: 42-411
Cow position: chr1:5135579-5135914 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 43-153
Cow position: chr1:1875518-1875409 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 43-168
Cow position: chr1:23055178-23055055 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 43-182
Cow position: chr1:43148414-43148555 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 43-205
Cow position: chr1:43311900-43312060 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 43-213
Cow position: chr1:98703292-98703117 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 167

Conread position: 43-225
Cow position: chr1:69481819-69481995 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 43-246
Cow position: chr1:95072463-95072265 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 101, 0

Conread position: 43-293
Cow position: chr1:67688452-67688692 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 70

Conread position: 43-345
Cow position: chr1:97696875-97696577 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 237, 85

Conread position: 43-347
Cow position: chr1:69127035-69127328 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 200
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 128, 0

Conread position: 43-374
Cow position: chr1:91874786-91875102 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 68

Conread position: 43-411
Cow position: chr1:6078024-6077672 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 100

Conread position: 43-411
Cow position: chr1:43872189-43872553 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 76

Conread position: 43-413
Cow position: chr1:36932284-36931935 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 43-447
Cow position: chr1:81913024-81913421 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 64

Conread position: 43-460
Cow position: chr1:3166945-3167348 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 88

Conread position: 43-460
Cow position: chr1:69264939-69264540 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 110

Conread position: 43-460
Cow position: chr1:94226424-94226830 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 370, 110

Conread position: 44-155
Cow position: chr1:55194117-55194227 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 44-326
Cow position: chr1:68845040-68845302 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 213, 18

Conread position: 44-335
Cow position: chr1:5580185-5579906 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 184, 33

Conread position: 44-343
Cow position: chr1:38401929-38401631 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 92

Conread position: 44-412
Cow position: chr1:3138043-3137710 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 243, 29

Conread position: 44-413
Cow position: chr1:42360418-42360042 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 38

Conread position: 45-166
Cow position: chr1:84288531-84288413 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 45-205
Cow position: chr1:54157425-54157266 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 156, 0

Conread position: 45-246
Cow position: chr1:30136225-30136419 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 104, 0

Conread position: 45-288
Cow position: chr1:95974528-95974289 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 226, 10

Conread position: 45-347
Cow position: chr1:94261664-94261377 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 297, 32

Conread position: 45-460
Cow position: chr1:81613518-81613103 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 110

Conread position: 46-413
Cow position: chr1:3789942-3790280 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 46-413
Cow position: chr1:83582805-83583162 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 47-177
Cow position: chr1:43499170-43499297 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 47-194
Cow position: chr1:74081855-74081999 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 47-207
Cow position: chr1:82556290-82556439 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 47-272
Cow position: chr1:4581204-4581417 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 47-292
Cow position: chr1:26427734-26427972 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 48-185
Cow position: chr1:52429537-52429669 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 48-292
Cow position: chr1:30417922-30418148 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 49-244
Cow position: chr1:5155094-5155280 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 50-407
Cow position: chr1:42138982-42138648 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 235, 105

Conread position: 50-411
Cow position: chr1:44125515-44125862 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 5

Conread position: 51-209
Cow position: chr1:81582237-81582080 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 29

Conread position: 51-291
Cow position: chr1:24406774-24407003 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 51-292
Cow position: chr1:3352577-3352804 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 51-292
Cow position: chr1:48769926-48769694 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 105

Conread position: 51-413
Cow position: chr1:41252287-41252627 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 89

Conread position: 51-423
Cow position: chr1:52052594-52052938 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 51-432
Cow position: chr1:98594688-98594327 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 206, 103

Conread position: 51-462
Cow position: chr1:8349201-8349593 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 75

Conread position: 51-462
Cow position: chr1:67821098-67821502 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 106

Conread position: 51-462
Cow position: chr1:95177060-95176651 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 30

Conread position: 52-397
Cow position: chr1:100393041-100393373 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 138

Conread position: 52-407
Cow position: chr1:16961890-16962232 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 233, 16

Conread position: 52-407
Cow position: chr1:89076511-89076854 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 233, 92

Conread position: 52-412
Cow position: chr1:78809998-78809660 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 52-439
Cow position: chr1:39509936-39510303 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 262, 101

Conread position: 52-458
Cow position: chr1:42873828-42874227 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 151

Conread position: 53-413
Cow position: chr1:49796113-49795780 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 55-195
Cow position: chr1:31855128-31855266 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 55-196
Cow position: chr1:42537203-42537343 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 70, 34

Conread position: 55-234
Cow position: chr1:92590310-92590142 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 55-245
Cow position: chr1:67646360-67646165 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 105

Conread position: 55-298
Cow position: chr1:6826180-6826405 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 55-413
Cow position: chr1:70380024-70380370 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 99

Conread position: 55-413
Cow position: chr1:96472549-96472205 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 266, 69

Conread position: 55-413
Cow position: chr1:100706245-100705908 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 232, 86

Conread position: 55-460
Cow position: chr1:85029073-85028679 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 91

Conread position: 55-460
Cow position: chr1:89350084-89349695 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 99

Conread position: 55-460
Cow position: chr1:97232079-97231694 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 146, 100

Conread position: 56-198
Cow position: chr1:45576051-45575912 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 56-209
Cow position: chr1:83618486-83618640 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 101

Conread position: 56-264
Cow position: chr1:99793667-99793461 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 11, 73

Conread position: 56-413
Cow position: chr1:88618714-88618369 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 234, 99

Conread position: 56-460
Cow position: chr1:51968580-51968188 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 56-460
Cow position: chr1:88652754-88652349 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 72

Conread position: 57-311
Cow position: chr1:93810546-93810300 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 179, 98

Conread position: 57-409
Cow position: chr1:14981006-14981339 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 99

Conread position: 58-208
Cow position: chr1:5006277-5006131 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 58-459
Cow position: chr1:43822515-43822096 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 184, 73

Conread position: 58-460
Cow position: chr1:66430407-66430019 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 169, 83

Conread position: 59-460
Cow position: chr1:37309404-37309790 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 98

Conread position: 59-462
Cow position: chr1:95215075-95215462 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 96

Conread position: 60-279
Cow position: chr1:30189266-30189049 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 97, 85

Conread position: 60-292
Cow position: chr1:61542805-61543028 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 60-420
Cow position: chr1:85774571-85774228 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 81

Conread position: 60-448
Cow position: chr1:26702092-26702470 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 83

Conread position: 61-258
Cow position: chr1:85866272-85866066 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 136

Conread position: 61-260
Cow position: chr1:52467416-52467223 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 60, 0

Conread position: 61-413
Cow position: chr1:80900232-80899883 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 28

Conread position: 61-462
Cow position: chr1:45288759-45289155 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 10

Conread position: 61-462
Cow position: chr1:91039061-91039443 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 80

Conread position: 62-460
Cow position: chr1:99614553-99614170 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 343, 50

Conread position: 63-283
Cow position: chr1:6752120-6752329 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 81

Conread position: 63-344
Cow position: chr1:60281484-60281208 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 92, 0

Conread position: 63-347
Cow position: chr1:12978793-12978515 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 63-411
Cow position: chr1:64250941-64251274 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 64-347
Cow position: chr1:27380567-27380309 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 8, 65

Conread position: 64-462
Cow position: chr1:7350658-7350254 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 90

Conread position: 65-218
Cow position: chr1:60466338-60466184 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 81

Conread position: 65-413
Cow position: chr1:39426896-39427206 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 66-413
Cow position: chr1:81563853-81563509 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 88

Conread position: 67-413
Cow position: chr1:81868622-81868951 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 326, 88

Conread position: 68-191
Cow position: chr1:31599031-31598910 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 68-296
Cow position: chr1:19226951-19227170 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 222, 85

Conread position: 68-356
Cow position: chr1:75142103-75141829 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 219, 76

Conread position: 68-394
Cow position: chr1:4414103-4414413 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 64

Conread position: 68-448
Cow position: chr1:64678801-64678427 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 345, 86

Conread position: 68-460
Cow position: chr1:81355597-81355985 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 346, 146

Conread position: 69-321
Cow position: chr1:89230126-89230367 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 69-398
Cow position: chr1:62291596-62291895 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 69-413
Cow position: chr1:3720339-3720651 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 0

Conread position: 69-413
Cow position: chr1:42555371-42555045 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 219, 86

Conread position: 69-432
Cow position: chr1:10063876-10064222 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 191, 55

Conread position: 70-407
Cow position: chr1:69415607-69415936 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 12

Conread position: 73-413
Cow position: chr1:20384522-20384845 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 74-460
Cow position: chr1:20205127-20204743 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 57

Conread position: 74-460
Cow position: chr1:53425277-53424910 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 82

Conread position: 75-195
Cow position: chr1:80442842-80442724 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 54

Conread position: 75-346
Cow position: chr1:87212032-87211781 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 0

Conread position: 75-349
Cow position: chr1:43703508-43703241 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 75-460
Cow position: chr1:91800499-91800881 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 52

Conread position: 81-412
Cow position: chr1:55146891-55146578 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 82-332
Cow position: chr1:5023670-5023908 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 138, 62

Conread position: 83-343
Cow position: chr1:70026254-70026505 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 88-306
Cow position: chr1:92434086-92433876 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 88-413
Cow position: chr1:68951711-68951407 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 90-407
Cow position: chr1:98311156-98310842 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 47, 31

Conread position: 90-413
Cow position: chr1:26729797-26729503 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 93-459
Cow position: chr1:4374256-4374619 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 51

Conread position: 93-462
Cow position: chr1:79591179-79590816 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 194, 74

Conread position: 95-262
Cow position: chr1:61560644-61560807 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 95-383
Cow position: chr1:6788204-6788484 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 95-420
Cow position: chr1:96478779-96478464 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 228
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 81, 49

Conread position: 97-325
Cow position: chr1:87440544-87440325 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 98-239
Cow position: chr1:80904843-80904709 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 99-412
Cow position: chr1:78791229-78791529 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 56

Conread position: 99-459
Cow position: chr1:102647198-102647550 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 188, 71

Conread position: 100-307
Cow position: chr1:91369935-91370134 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 100-383
Cow position: chr1:51654498-51654216 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 87, 44

Conread position: 102-386
Cow position: chr1:95179026-95178754 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 187, 53

Conread position: 102-460
Cow position: chr1:3537674-3538031 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 19

Conread position: 102-460
Cow position: chr1:64817811-64818172 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 23

Conread position: 103-263
Cow position: chr1:41695671-41695518 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 106-413
Cow position: chr1:1916159-1916459 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 94, 49

Conread position: 110-320
Cow position: chr1:85301481-85301280 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 88, 49

Conread position: 111-307
Cow position: chr1:8984619-8984810 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 111-462
Cow position: chr1:54199316-54199664 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 44

Conread position: 112-460
Cow position: chr1:24235457-24235800 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 43

Conread position: 113-371
Cow position: chr1:24445567-24445811 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 114-374
Cow position: chr1:24413509-24413254 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 24

Conread position: 118-346
Cow position: chr1:89508605-89508392 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 118-460
Cow position: chr1:99136374-99136712 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 36

Conread position: 121-458
Cow position: chr1:44155303-44154982 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 142, 22

Conread position: 128-347
Cow position: chr1:80631745-80631537 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 157, 19

Conread position: 128-413
Cow position: chr1:45535753-45535478 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 0

Conread position: 131-281
Cow position: chr1:58438956-58439101 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 131-346
Cow position: chr1:99039312-99039517 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 0

Conread position: 131-413
Cow position: chr1:62920211-62919952 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 131-432
Cow position: chr1:57635505-57635223 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 131-452
Cow position: chr1:95017486-95017787 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 274, 24

Conread position: 133-405
Cow position: chr1:26929934-26930191 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 136-412
Cow position: chr1:3061544-3061816 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 28

Conread position: 138-460
Cow position: chr1:47009071-47008750 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 276, 65

Conread position: 144-413
Cow position: chr1:76222656-76222915 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 62

Conread position: 146-292
Cow position: chr1:22466478-22466621 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 54

Conread position: 146-371
Cow position: chr1:64421361-64421148 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 139, 54

Conread position: 147-401
Cow position: chr1:51684836-51684585 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 69

Conread position: 148-320
Cow position: chr1:40069264-40069104 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 140, 49

Conread position: 148-413
Cow position: chr1:1403453-1403698 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 251, 54

Conread position: 149-460
Cow position: chr1:98563189-98562878 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 54

Conread position: 150-460
Cow position: chr1:86543672-86543985 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 213
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 53

Conread position: 151-413
Cow position: chr1:57263967-57264211 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 153-338
Cow position: chr1:85826370-85826190 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 50

Conread position: 155-460
Cow position: chr1:84170497-84170220 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 156-335
Cow position: chr1:12989072-12988892 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 114

Conread position: 156-454
Cow position: chr1:666386-666084 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 128, 44

Conread position: 157-460
Cow position: chr1:33811949-33811652 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 192, 45

Conread position: 157-460
Cow position: chr1:71946351-71946652 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 58

Conread position: 162-406
Cow position: chr1:94404228-94403999 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 163-394
Cow position: chr1:32013967-32013751 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 37

Conread position: 164-413
Cow position: chr1:12595889-12596125 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 164-460
Cow position: chr1:44165098-44164798 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 198
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 250, 53

Conread position: 165-404
Cow position: chr1:84910620-84910849 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 108, 44

Conread position: 167-460
Cow position: chr1:5872958-5873255 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 120, 48

Conread position: 170-459
Cow position: chr1:60115041-60114749 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 38

Conread position: 170-460
Cow position: chr1:62224195-62223902 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 124, 33

Conread position: 171-413
Cow position: chr1:100512614-100512371 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 157

Conread position: 171-453
Cow position: chr1:55686192-55686494 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 79, 46

Conread position: 171-460
Cow position: chr1:41004355-41004649 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 32

Conread position: 171-460
Cow position: chr1:101547018-101547324 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 188

Conread position: 172-462
Cow position: chr1:82861785-82861489 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 112, 33

Conread position: 175-412
Cow position: chr1:20799899-20799649 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 21

Conread position: 181-460
Cow position: chr1:8532210-8532496 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 144

Conread position: 182-372
Cow position: chr1:69378747-69378933 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 8

Conread position: 188-374
Cow position: chr1:102113115-102113294 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 189-413
Cow position: chr1:3035001-3035217 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 195-338
Cow position: chr1:65909515-65909370 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 196-413
Cow position: chr1:99095348-99095139 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 137

Conread position: 199-374
Cow position: chr1:83593820-83593993 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 86, 153

Conread position: 200-460
Cow position: chr1:4589494-4589763 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 15

Conread position: 202-413
Cow position: chr1:63905493-63905698 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 203-352
Cow position: chr1:31960206-31960054 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 205-462
Cow position: chr1:98380594-98380861 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 114

Conread position: 206-413
Cow position: chr1:24655936-24655736 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 81, 9

Conread position: 215-458
Cow position: chr1:67008777-67009013 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 198, 12

Conread position: 217-412
Cow position: chr1:75967396-75967213 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 0

Conread position: 217-413
Cow position: chr1:89395566-89395368 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 137

Conread position: 224-458
Cow position: chr1:84447905-84447662 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 126

Conread position: 233-413
Cow position: chr1:30504420-30504246 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 82, 0

Conread position: 245-453
Cow position: chr1:32631404-32631195 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 91

Conread position: 254-459
Cow position: chr1:40062380-40062167 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 152, 96

Show alignments to all cow chromosomes.