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Cow genome map

           
Conread name:
           
rpigcf0_001345.y1
        

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:21106959-21107289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:40491033-40491449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:18166548-18166953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 156
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr13:185352-185618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr13:8355025-8355299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr13:48165607-48165274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 122
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr13:43919449-43919040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
45, 160
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr13:31813689-31814139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 158
               

               
Conread position:
               
4-153
               

               
Cow position:
               
chr13:1075217-1075069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr13:45108582-45108355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
4-317
               

               
Cow position:
               
chr13:18994941-18995256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr13:26365686-26366066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 211
               

               
Conread position:
               
4-460
               

               
Cow position:
               
chr13:52057376-52057812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 151
               

               
Conread position:
               
4-462
               

               
Cow position:
               
chr13:20570547-20570999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
5-124
               

               
Cow position:
               
chr13:47651595-47651475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
5-139
               

               
Cow position:
               
chr13:21425999-21425874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr13:16099309-16099152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
5-153
               

               
Cow position:
               
chr13:53865452-53865606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-154
               

               
Cow position:
               
chr13:17135398-17135242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
5-155
               

               
Cow position:
               
chr13:9492593-9492742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
5-159
               

               
Cow position:
               
chr13:34533109-34532956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
5-162
               

               
Cow position:
               
chr13:6976023-6975868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr13:53850640-53850815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
49, 154
               

               
Conread position:
               
5-179
               

               
Cow position:
               
chr13:4404354-4404525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr13:6486433-6486241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr13:40541289-40541093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 170
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr13:41157217-41157419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 160
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr13:57986112-57985914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr13:55494702-55494477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 50
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr13:17611731-17611501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
5-239
               

               
Cow position:
               
chr13:38035659-38035886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr13:14411711-14411956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr13:62007927-62008171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr13:21170348-21170607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 195
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr13:16038463-16038200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr13:25978374-25978098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr13:56035037-56034766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr13:14576035-14576334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
306, 150
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr13:2803306-2803599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
292, 55
               

               
Conread position:
               
5-346
               

               
Cow position:
               
chr13:6540481-6540156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
176, 33
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr13:41155235-41154874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 216
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr13:20088899-20088500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr13:12282656-12283052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 38
               

               
Conread position:
               
5-412
               

               
Cow position:
               
chr13:45074083-45073720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr13:20821017-20820624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr13:36876885-36877288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 39
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr13:47964353-47963985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-432
               

               
Cow position:
               
chr13:20784414-20784824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
417, 50
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr13:34263553-34263107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr13:1231462-1231926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 202
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr13:12876156-12875709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
6-112
               

               
Cow position:
               
chr13:17815065-17815167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
6-116
               

               
Cow position:
               
chr13:6012901-6012793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
6-119
               

               
Cow position:
               
chr13:26098004-26098116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
6-122
               

               
Cow position:
               
chr13:25313328-25313210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
6-124
               

               
Cow position:
               
chr13:53847298-53847180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-126
               

               
Cow position:
               
chr13:23478721-23478845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-128
               

               
Cow position:
               
chr13:5873613-5873486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
6-129
               

               
Cow position:
               
chr13:5659944-5659821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-130
               

               
Cow position:
               
chr13:23795558-23795441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-132
               

               
Cow position:
               
chr13:22345454-22345325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
6-132
               

               
Cow position:
               
chr13:57446292-57446170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr13:6951400-6951529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
6-135
               

               
Cow position:
               
chr13:9551184-9551313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
6-135
               

               
Cow position:
               
chr13:23823209-23823082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
6-136
               

               
Cow position:
               
chr13:27198732-27198861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr13:7097407-7097541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr13:16525407-16525269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr13:23399587-23399720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr13:8667436-8667575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr13:37405535-37405666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr13:37946565-37946434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
6-138
               

               
Cow position:
               
chr13:55143095-55143228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr13:5930493-5930352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 132
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr13:26395280-26395417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr13:28081537-28081678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr13:57322970-57323102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr13:13265385-13265524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
6-149
               

               
Cow position:
               
chr13:48126925-48127074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-149
               

               
Cow position:
               
chr13:52249223-52249082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
6-150
               

               
Cow position:
               
chr13:390819-390673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
6-150
               

               
Cow position:
               
chr13:24107725-24107581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 87
               

               
Conread position:
               
6-151
               

               
Cow position:
               
chr13:1037458-1037607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-152
               

               
Cow position:
               
chr13:37555050-37554905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
6-152
               

               
Cow position:
               
chr13:54681914-54682073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr13:6113711-6113556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr13:9124749-9124894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr13:11146874-11147027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr13:11565660-11565807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr13:16163407-16163552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-154
               

               
Cow position:
               
chr13:1339324-1339170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-155
               

               
Cow position:
               
chr13:8537639-8537795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
6-155
               

               
Cow position:
               
chr13:10711594-10711443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-160
               

               
Cow position:
               
chr13:52027315-52027160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr13:21277636-21277487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr13:31507620-31507464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr13:33854863-33854704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr13:52913697-52913853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-173
               

               
Cow position:
               
chr13:9391385-9391548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
6-178
               

               
Cow position:
               
chr13:38012160-38012325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-179
               

               
Cow position:
               
chr13:6980746-6980913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
6-179
               

               
Cow position:
               
chr13:8699922-8699743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr13:17813292-17813469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr13:18093048-18092877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr13:52536392-52536563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr13:57770162-57769990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr13:45593744-45593921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
177, 112
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr13:15144010-15143836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr13:16908034-16908224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
6-192
               

               
Cow position:
               
chr13:49356228-49356042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr13:9707926-9707738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr13:37614377-37614180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 189
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr13:2776105-2776300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 155
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr13:6926333-6926529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
48, 145
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr13:20519892-20520073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr13:33974567-33974745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr13:14644874-14645064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 148
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr13:14927083-14927273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr13:18340351-18340546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr13:25941445-25941251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
42, 76
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr13:27180858-27181054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr13:34873406-34873602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr13:20090546-20090362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr13:19598844-19598647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr13:21981149-21980956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
192, 80
               

               
Conread position:
               
6-205
               

               
Cow position:
               
chr13:50646808-50646616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr13:15993204-15993408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr13:11434756-11434549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr13:47243733-47243532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr13:45439353-45439552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr13:33601408-33601194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr13:585053-584827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 139
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr13:20115065-20115302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 191
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr13:16020680-16020904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr13:17089692-17089470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
6-245
               

               
Cow position:
               
chr13:19007761-19007987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr13:11231476-11231252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
6-250
               

               
Cow position:
               
chr13:11103387-11103131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
48, 215
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr13:18197787-18197546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr13:13211709-13211951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
6-259
               

               
Cow position:
               
chr13:55162026-55162280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr13:15756937-15757190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr13:42672609-42672352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 158
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr13:20868925-20868682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr13:39939748-39939490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr13:7333193-7332910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 85
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr13:19779034-19778758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr13:45073428-45073167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
184, 46
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr13:13533841-13533579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
167, 80
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr13:20137638-20137915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 196
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr13:52477824-52477555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr13:16714445-16714169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr13:54128777-54128500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr13:20871214-20871486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr13:17498039-17498318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
251, 155
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr13:20534718-20534983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr13:7265285-7265023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr13:12974637-12974904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr13:20154826-20155107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 45
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr13:6860996-6861292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 157
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr13:10220778-10221060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 166
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr13:15194900-15194613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 43
               

               
Conread position:
               
6-309
               

               
Cow position:
               
chr13:19278916-19279209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr13:30258670-30258967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr13:1568755-1569046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr13:5911072-5910773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
281, 80
               

               
Conread position:
               
6-313
               

               
Cow position:
               
chr13:60375667-60375365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 124
               

               
Conread position:
               
6-314
               

               
Cow position:
               
chr13:39826374-39826677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr13:20217577-20217260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
6-319
               

               
Cow position:
               
chr13:21280680-21280358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr13:18929346-18929661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr13:58763788-58763501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr13:25579373-25579053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr13:6663935-6663614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr13:20360096-20360413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr13:28552407-28552739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr13:3160223-3160536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr13:18058426-18058104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 67
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr13:44003517-44003864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
48, 276
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr13:48597730-48598055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 154
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr13:8374940-8374626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr13:6442286-6441953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 28
               

               
Conread position:
               
6-338
               

               
Cow position:
               
chr13:11808400-11808706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr13:26698676-26698348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr13:54389200-54388870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr13:5758516-5758189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr13:15195380-15195047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 69
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr13:54582695-54583034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr13:11820978-11821315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr13:18999352-18999716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr13:20473854-20473515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr13:47186051-47186401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
5, 98
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr13:49823844-49824204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr13:49503717-49503347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr13:29831606-29831238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr13:52055772-52055394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
6-401
               

               
Cow position:
               
chr13:19223472-19223853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 125
               

               
Conread position:
               
6-403
               

               
Cow position:
               
chr13:14063700-14063318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
6-403
               

               
Cow position:
               
chr13:46111789-46112173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
48, 29
               

               
Conread position:
               
6-406
               

               
Cow position:
               
chr13:10925102-10924698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr13:32282945-32283339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 155
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr13:19022085-19022491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr13:5279385-5278975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 350
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr13:15257548-15257164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr13:23478849-23479243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 139
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr13:56686262-56686641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 37
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr13:18851909-18852291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr13:20497463-20497867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:4665029-4664646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
311, 45
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:10845439-10845809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:12206882-12207259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:13320618-13320992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:15041654-15041256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:15193067-15192678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 140
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:15289098-15288710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 121
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:15868930-15869335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 198
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:15974439-15974826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 151
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:17114560-17114164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:19033376-19033762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 154
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:20881100-20880711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:21242255-21241876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:23667076-23667479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:23960991-23960590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 159
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:24155331-24155757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 309
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:24369405-24369801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 101
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:26261971-26261578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 144
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:26480385-26479998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:34261056-34261448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:35526378-35526001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:37069162-37069565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:38329439-38329846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 147
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:44322713-44323118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 206
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr13:55674389-55673989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 152
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr13:45023402-45022991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr13:57475596-57475202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr13:25926609-25927015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr13:35659576-35659976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
6-421
               

               
Cow position:
               
chr13:57002543-57002956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
6-432
               

               
Cow position:
               
chr13:60509303-60508880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
6-435
               

               
Cow position:
               
chr13:24715070-24715486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 42
               

               
Conread position:
               
6-444
               

               
Cow position:
               
chr13:53573794-53574216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 49
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr13:22085913-22085495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 35
               

               
Conread position:
               
6-449
               

               
Cow position:
               
chr13:42200441-42200870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr13:12670631-12670173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr13:20271413-20270945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr13:20666565-20666115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr13:47007892-47007466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 54
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:151786-152216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 147
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:311253-311706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:6079582-6079145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 37
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:6189779-6189357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 142
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:13088853-13089297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 62
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:17159061-17158590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 195
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:20893823-20893368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:21235847-21235415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:21275677-21276129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:25817350-25817787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 118
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:34729022-34728566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:45352848-45353316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 155
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:46515877-46516336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:57494352-57493910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 46
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr13:61977137-61976691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:8362926-8362470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:10989253-10988798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:17821437-17820984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 47
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:20174559-20175015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 202
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:32017695-32017247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 82
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:33256318-33256772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:44278165-44278630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:49804806-49805244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
285, 43
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr13:51528620-51528170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
7-136
               

               
Cow position:
               
chr13:53619822-53619957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
7-140
               

               
Cow position:
               
chr13:3149611-3149474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
7-149
               

               
Cow position:
               
chr13:20440796-20440650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
7-153
               

               
Cow position:
               
chr13:1363282-1363425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
7-169
               

               
Cow position:
               
chr13:51249558-51249396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr13:49283956-49283792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
7-194
               

               
Cow position:
               
chr13:49204828-49205007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
7-198
               

               
Cow position:
               
chr13:15083483-15083672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr13:15996856-15997050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr13:35557289-35557046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
7-253
               

               
Cow position:
               
chr13:25504360-25504596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
7-308
               

               
Cow position:
               
chr13:27550557-27550857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 85
               

               
Conread position:
               
7-327
               

               
Cow position:
               
chr13:20288160-20288466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr13:6848746-6849088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
7-373
               

               
Cow position:
               
chr13:13338680-13339040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 134
               

               
Conread position:
               
7-374
               

               
Cow position:
               
chr13:49023044-49022693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
7-397
               

               
Cow position:
               
chr13:24230031-24230413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
7-411
               

               
Cow position:
               
chr13:17745080-17745453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
7-411
               

               
Cow position:
               
chr13:19610742-19610362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 123
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr13:5263457-5263070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 137
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr13:9587763-9587367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr13:43479883-43480277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
7-420
               

               
Cow position:
               
chr13:16292359-16292769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
7-422
               

               
Cow position:
               
chr13:7059280-7059700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
7-424
               

               
Cow position:
               
chr13:51015362-51014953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
7-432
               

               
Cow position:
               
chr13:17021903-17021484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
7-447
               

               
Cow position:
               
chr13:21288263-21287829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
7-454
               

               
Cow position:
               
chr13:42113837-42114289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
7-460
               

               
Cow position:
               
chr13:38284156-38283710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
7-461
               

               
Cow position:
               
chr13:20606299-20605844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr13:42860748-42860297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
7-462
               

               
Cow position:
               
chr13:58043447-58043904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
8-115
               

               
Cow position:
               
chr13:25924399-25924290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
8-116
               

               
Cow position:
               
chr13:4135706-4135816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
8-124
               

               
Cow position:
               
chr13:43342390-43342509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
8-146
               

               
Cow position:
               
chr13:55775188-55775323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
8-183
               

               
Cow position:
               
chr13:10210833-10210661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
8-185
               

               
Cow position:
               
chr13:8450156-8450330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
8-252
               

               
Cow position:
               
chr13:15239688-15239458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr13:7149678-7149440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr13:46329783-46329499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 147
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr13:13196064-13196351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
8-346
               

               
Cow position:
               
chr13:21136089-21135748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 159
               

               
Conread position:
               
8-412
               

               
Cow position:
               
chr13:24585871-24586262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr13:34281504-34281953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr13:46525606-46525171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr13:27525437-27524988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
8-461
               

               
Cow position:
               
chr13:972074-971623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
9-133
               

               
Cow position:
               
chr13:41474696-41474820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
9-153
               

               
Cow position:
               
chr13:54652494-54652355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr13:56535291-56535477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr13:28440712-28440492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
9-234
               

               
Cow position:
               
chr13:29662861-29663074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr13:19393116-19393503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 117
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr13:52586206-52585749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 7
               

               
Conread position:
               
10-125
               

               
Cow position:
               
chr13:14782169-14782284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-136
               

               
Cow position:
               
chr13:42613907-42614037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
10-143
               

               
Cow position:
               
chr13:56431996-56431865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 41
               

               
Conread position:
               
10-149
               

               
Cow position:
               
chr13:6865839-6865699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
10-151
               

               
Cow position:
               
chr13:57929747-57929604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr13:30148736-30148593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-157
               

               
Cow position:
               
chr13:13286546-13286403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr13:20876094-20875942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
10-183
               

               
Cow position:
               
chr13:38703054-38702878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
10-190
               

               
Cow position:
               
chr13:15061668-15061476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr13:10522764-10522943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr13:7104480-7104664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
10-198
               

               
Cow position:
               
chr13:47193221-47193394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr13:12673463-12673275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr13:55765351-55765158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
105, 68
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr13:84412-84601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr13:21866811-21866601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
10-225
               

               
Cow position:
               
chr13:16160245-16160457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr13:17823125-17822902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr13:20358061-20357779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr13:11260102-11260399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 118
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr13:11321784-11321479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
10-335
               

               
Cow position:
               
chr13:14879130-14878806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
10-337
               

               
Cow position:
               
chr13:5671761-5671445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
10-346
               

               
Cow position:
               
chr13:28139407-28139722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr13:14016738-14016412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr13:20579739-20580075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
277, 88
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr13:15991406-15991045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr13:55583019-55583376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
10-401
               

               
Cow position:
               
chr13:37593126-37592734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
10-411
               

               
Cow position:
               
chr13:6973987-6974374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
10-413
               

               
Cow position:
               
chr13:25547761-25547378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
10-413
               

               
Cow position:
               
chr13:37818924-37818544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
10-414
               

               
Cow position:
               
chr13:52228273-52227883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 74
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr13:37775381-37775002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
10-458
               

               
Cow position:
               
chr13:12449165-12448716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
10-462
               

               
Cow position:
               
chr13:1155882-1155432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 136
               

               
Conread position:
               
10-462
               

               
Cow position:
               
chr13:6616938-6616472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 199
               

               
Conread position:
               
11-151
               

               
Cow position:
               
chr13:5092569-5092426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
11-197
               

               
Cow position:
               
chr13:8232835-8233010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
11-269
               

               
Cow position:
               
chr13:7149058-7149307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 62
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chr13:7076087-7076472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 20
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chr13:22115500-22115920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 303
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chr13:23167274-23166880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
11-432
               

               
Cow position:
               
chr13:48252147-48251756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
64, 110
               

               
Conread position:
               
11-452
               

               
Cow position:
               
chr13:54702005-54702456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
12-201
               

               
Cow position:
               
chr13:1462467-1462281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 131
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr13:20314796-20314557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
12-339
               

               
Cow position:
               
chr13:17569271-17568950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
12-413
               

               
Cow position:
               
chr13:18491425-18491810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 159
               

               
Conread position:
               
12-413
               

               
Cow position:
               
chr13:19883207-19882819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
13-164
               

               
Cow position:
               
chr13:16790041-16790188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
14-347
               

               
Cow position:
               
chr13:25495832-25496163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
14-455
               

               
Cow position:
               
chr13:38278315-38277868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
193, 11
               

               
Conread position:
               
14-460
               

               
Cow position:
               
chr13:41806601-41807049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
16-200
               

               
Cow position:
               
chr13:26889056-26889237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
16-239
               

               
Cow position:
               
chr13:1147322-1147102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
16-285
               

               
Cow position:
               
chr13:23525946-23526204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
16-403
               

               
Cow position:
               
chr13:20679171-20679551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
16-413
               

               
Cow position:
               
chr13:17292297-17291914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
17-126
               

               
Cow position:
               
chr13:9108840-9108732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
17-129
               

               
Cow position:
               
chr13:6909002-6909116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
17-157
               

               
Cow position:
               
chr13:8637526-8637673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
17-177
               

               
Cow position:
               
chr13:37980927-37980766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
17-239
               

               
Cow position:
               
chr13:52641120-52640901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
17-369
               

               
Cow position:
               
chr13:6930753-6931094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
270, 20
               

               
Conread position:
               
17-411
               

               
Cow position:
               
chr13:13260830-13261222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
17-411
               

               
Cow position:
               
chr13:43595275-43594901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
17-460
               

               
Cow position:
               
chr13:20879993-20879563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 139
               

               
Conread position:
               
18-178
               

               
Cow position:
               
chr13:28439240-28439403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 141
               

               
Conread position:
               
18-442
               

               
Cow position:
               
chr13:52893978-52894398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr13:24753726-24754158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 33
               

               
Conread position:
               
19-201
               

               
Cow position:
               
chr13:3209485-3209305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
19-412
               

               
Cow position:
               
chr13:9246565-9246929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
19-460
               

               
Cow position:
               
chr13:51940569-51941003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
22-197
               

               
Cow position:
               
chr13:28071706-28071885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
23-462
               

               
Cow position:
               
chr13:17855205-17855650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
24-294
               

               
Cow position:
               
chr13:11397605-11397354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
261, 6
               

               
Conread position:
               
25-138
               

               
Cow position:
               
chr13:5992697-5992810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-195
               

               
Cow position:
               
chr13:19750557-19750725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 87
               

               
Conread position:
               
25-335
               

               
Cow position:
               
chr13:52749628-52749336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
262, 125
               

               
Conread position:
               
26-258
               

               
Cow position:
               
chr13:37503745-37503513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
27-194
               

               
Cow position:
               
chr13:18615220-18615393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 142
               

               
Conread position:
               
27-248
               

               
Cow position:
               
chr13:17350196-17350411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
28-292
               

               
Cow position:
               
chr13:47022208-47022461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
29-196
               

               
Cow position:
               
chr13:51814088-51813925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
29-413
               

               
Cow position:
               
chr13:1958848-1959225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
29-413
               

               
Cow position:
               
chr13:9664905-9665291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
29-413
               

               
Cow position:
               
chr13:12989699-12990063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 19
               

               
Conread position:
               
30-264
               

               
Cow position:
               
chr13:827093-827316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
31-232
               

               
Cow position:
               
chr13:8350168-8350373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
32-326
               

               
Cow position:
               
chr13:62518475-62518196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
32-335
               

               
Cow position:
               
chr13:49520974-49520677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
32-337
               

               
Cow position:
               
chr13:46736067-46736360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
281, 9
               

               
Conread position:
               
32-460
               

               
Cow position:
               
chr13:7663575-7663155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
33-281
               

               
Cow position:
               
chr13:3211398-3211642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
33-459
               

               
Cow position:
               
chr13:60966619-60967037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr13:7046722-7046886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr13:11643791-11644090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
36-457
               

               
Cow position:
               
chr13:1043109-1042685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 32
               

               
Conread position:
               
37-148
               

               
Cow position:
               
chr13:37979719-37979609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
37-460
               

               
Cow position:
               
chr13:37484425-37483996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 116
               

               
Conread position:
               
37-462
               

               
Cow position:
               
chr13:53566455-53566861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
38-142
               

               
Cow position:
               
chr13:19467482-19467379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
38-147
               

               
Cow position:
               
chr13:28652596-28652705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-152
               

               
Cow position:
               
chr13:20826869-20826754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
38-152
               

               
Cow position:
               
chr13:47643915-47644033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
38-153
               

               
Cow position:
               
chr13:25521061-25520945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
38-155
               

               
Cow position:
               
chr13:15808623-15808739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
38-181
               

               
Cow position:
               
chr13:21294930-21295071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
38-193
               

               
Cow position:
               
chr13:52881009-52880860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
38-197
               

               
Cow position:
               
chr13:49255384-49255223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 17
               

               
Conread position:
               
38-198
               

               
Cow position:
               
chr13:42640241-42640395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
38-201
               

               
Cow position:
               
chr13:37621502-37621344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
38-267
               

               
Cow position:
               
chr13:9981986-9981764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
38-283
               

               
Cow position:
               
chr13:50751201-50750961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
38-285
               

               
Cow position:
               
chr13:13297534-13297769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
38-292
               

               
Cow position:
               
chr13:55727757-55728002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
38-320
               

               
Cow position:
               
chr13:6389251-6389510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
38-320
               

               
Cow position:
               
chr13:17338284-17338568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr13:51116170-51115891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 118
               

               
Conread position:
               
38-333
               

               
Cow position:
               
chr13:11381869-11381579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
38-337
               

               
Cow position:
               
chr13:1363549-1363841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
38-342
               

               
Cow position:
               
chr13:37640445-37640738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
215, 28
               

               
Conread position:
               
38-346
               

               
Cow position:
               
chr13:13954537-13954232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
38-347
               

               
Cow position:
               
chr13:866977-867281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
38-347
               

               
Cow position:
               
chr13:28689323-28689623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
239, 47
               

               
Conread position:
               
38-378
               

               
Cow position:
               
chr13:5082506-5082835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
38-383
               

               
Cow position:
               
chr13:14771307-14771647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 44
               

               
Conread position:
               
38-398
               

               
Cow position:
               
chr13:61188387-61188736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
38-399
               

               
Cow position:
               
chr13:15282079-15281734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
228, 22
               

               
Conread position:
               
38-407
               

               
Cow position:
               
chr13:9265971-9265608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
38-407
               

               
Cow position:
               
chr13:51822019-51821682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
38-411
               

               
Cow position:
               
chr13:20706350-20705988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
38-412
               

               
Cow position:
               
chr13:3315820-3315459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 131
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr13:17439913-17439550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr13:17799930-17800288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr13:38873089-38872756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr13:20509589-20509966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
20, 40
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr13:17971174-17970799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
38-432
               

               
Cow position:
               
chr13:19023993-19023603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 48
               

               
Conread position:
               
38-439
               

               
Cow position:
               
chr13:55316342-55315946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr13:30798575-30798996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr13:40651789-40652207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr13:40943096-40943517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 61
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr13:51901439-51901886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr13:61047069-61047480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:2773982-2774394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 164
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:12045487-12045065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:12547053-12546631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 117
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:15872296-15872725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:15958471-15958897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:36771564-36771146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 10
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:37381656-37382087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 117
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:47756218-47756650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr13:50690544-50690116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
39-174
               

               
Cow position:
               
chr13:6962309-6962441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
39-213
               

               
Cow position:
               
chr13:43525378-43525208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
39-240
               

               
Cow position:
               
chr13:40634720-40634903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
85, 115
               

               
Conread position:
               
39-249
               

               
Cow position:
               
chr13:6889600-6889810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
39-252
               

               
Cow position:
               
chr13:24110336-24110548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
159, 116
               

               
Conread position:
               
39-281
               

               
Cow position:
               
chr13:15659135-15659366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
31, 46
               

               
Conread position:
               
39-291
               

               
Cow position:
               
chr13:3989060-3989304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
174, 24
               

               
Conread position:
               
39-339
               

               
Cow position:
               
chr13:18696697-18696991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
39-413
               

               
Cow position:
               
chr13:52284673-52285032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 16
               

               
Conread position:
               
39-420
               

               
Cow position:
               
chr13:11096038-11096395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 52
               

               
Conread position:
               
39-458
               

               
Cow position:
               
chr13:4552675-4553071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
248, 22
               

               
Conread position:
               
39-459
               

               
Cow position:
               
chr13:18172192-18172599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
416, 114
               

               
Conread position:
               
39-460
               

               
Cow position:
               
chr13:60973936-60974349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
39-462
               

               
Cow position:
               
chr13:46324931-46324513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
248, 46
               

               
Conread position:
               
40-293
               

               
Cow position:
               
chr13:50568549-50568314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
40-301
               

               
Cow position:
               
chr13:19320387-19320646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
40-374
               

               
Cow position:
               
chr13:19188158-19188481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 104
               

               
Conread position:
               
40-398
               

               
Cow position:
               
chr13:61990465-61990133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
40-415
               

               
Cow position:
               
chr13:37803748-37804097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
40-420
               

               
Cow position:
               
chr13:54418081-54418455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 55
               

               
Conread position:
               
41-139
               

               
Cow position:
               
chr13:18701230-18701328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-239
               

               
Cow position:
               
chr13:21171714-21171523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
41-299
               

               
Cow position:
               
chr13:32826617-32826347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
41-330
               

               
Cow position:
               
chr13:21269719-21269440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
246, 42
               

               
Conread position:
               
41-412
               

               
Cow position:
               
chr13:56155293-56154946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
41-413
               

               
Cow position:
               
chr13:23856069-23856431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
41-413
               

               
Cow position:
               
chr13:56148379-56148756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 161
               

               
Conread position:
               
41-413
               

               
Cow position:
               
chr13:56160588-56160211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 161
               

               
Conread position:
               
41-421
               

               
Cow position:
               
chr13:16014669-16015031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
41-460
               

               
Cow position:
               
chr13:6087034-6086627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 48
               

               
Conread position:
               
41-460
               

               
Cow position:
               
chr13:8609689-8609277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 114
               

               
Conread position:
               
41-460
               

               
Cow position:
               
chr13:20684273-20683849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
41-462
               

               
Cow position:
               
chr13:60430221-60429803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
42-239
               

               
Cow position:
               
chr13:8478262-8478452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
42-247
               

               
Cow position:
               
chr13:14749484-14749687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
43-170
               

               
Cow position:
               
chr13:26422907-26423038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
43-190
               

               
Cow position:
               
chr13:21188228-21188369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
43-234
               

               
Cow position:
               
chr13:15460916-15460730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
43-258
               

               
Cow position:
               
chr13:17563600-17563804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
43-319
               

               
Cow position:
               
chr13:11591610-11591875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
43-396
               

               
Cow position:
               
chr13:26369384-26369725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
244, 74
               

               
Conread position:
               
43-412
               

               
Cow position:
               
chr13:2413889-2414241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
43-432
               

               
Cow position:
               
chr13:46181651-46182029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
43-460
               

               
Cow position:
               
chr13:13765650-13766040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
370, 70
               

               
Conread position:
               
43-460
               

               
Cow position:
               
chr13:18835062-18835460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
43-460
               

               
Cow position:
               
chr13:20562853-20563272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 126
               

               
Conread position:
               
43-460
               

               
Cow position:
               
chr13:45725746-45726153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
44-169
               

               
Cow position:
               
chr13:44434968-44434847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
44-337
               

               
Cow position:
               
chr13:39367820-39368102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
94, 158
               

               
Conread position:
               
44-388
               

               
Cow position:
               
chr13:21283843-21283515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
44-398
               

               
Cow position:
               
chr13:547356-547689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 45
               

               
Conread position:
               
44-413
               

               
Cow position:
               
chr13:9975215-9974852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
44-432
               

               
Cow position:
               
chr13:39952553-39952177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
189, 73
               

               
Conread position:
               
45-413
               

               
Cow position:
               
chr13:13176513-13176865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
45-460
               

               
Cow position:
               
chr13:42229175-42229593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
46-149
               

               
Cow position:
               
chr13:18215229-18215332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-151
               

               
Cow position:
               
chr13:12237308-12237413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-197
               

               
Cow position:
               
chr13:48465967-48465824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
46-200
               

               
Cow position:
               
chr13:37528090-37527938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
46-337
               

               
Cow position:
               
chr13:2822733-2823006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
47-151
               

               
Cow position:
               
chr13:15060503-15060608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
47-333
               

               
Cow position:
               
chr13:8555329-8555606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
239, 36
               

               
Conread position:
               
47-413
               

               
Cow position:
               
chr13:11768181-11767825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
47-413
               

               
Cow position:
               
chr13:43869248-43868902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
191, 21
               

               
Conread position:
               
47-414
               

               
Cow position:
               
chr13:8245468-8245115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
47-424
               

               
Cow position:
               
chr13:9593370-9593732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
47-460
               

               
Cow position:
               
chr13:25435260-25434855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
48-200
               

               
Cow position:
               
chr13:6183555-6183405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
48-318
               

               
Cow position:
               
chr13:15144499-15144244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
259, 13
               

               
Conread position:
               
48-403
               

               
Cow position:
               
chr13:9644015-9643676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
239, 20
               

               
Conread position:
               
48-413
               

               
Cow position:
               
chr13:10929123-10928774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
48-422
               

               
Cow position:
               
chr13:43762034-43762390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
49-459
               

               
Cow position:
               
chr13:11820463-11820850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
50-460
               

               
Cow position:
               
chr13:25537491-25537915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 5
               

               
Conread position:
               
51-182
               

               
Cow position:
               
chr13:42849264-42849136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
51-306
               

               
Cow position:
               
chr13:8401923-8402171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
51-320
               

               
Cow position:
               
chr13:25380829-25381092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
51-412
               

               
Cow position:
               
chr13:48037491-48037835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
51-413
               

               
Cow position:
               
chr13:20650114-20649767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
51-420
               

               
Cow position:
               
chr13:40722839-40722487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
185, 93
               

               
Conread position:
               
52-337
               

               
Cow position:
               
chr13:43829113-43829399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
184, 117
               

               
Conread position:
               
52-411
               

               
Cow position:
               
chr13:13501748-13501408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
52-413
               

               
Cow position:
               
chr13:11460502-11460841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
52-432
               

               
Cow position:
               
chr13:28683231-28683594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
53-346
               

               
Cow position:
               
chr13:27493987-27493695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
104, 145
               

               
Conread position:
               
53-439
               

               
Cow position:
               
chr13:11060857-11061231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
53-458
               

               
Cow position:
               
chr13:21176449-21176050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 35
               

               
Conread position:
               
54-460
               

               
Cow position:
               
chr13:23270334-23269939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 88
               

               
Conread position:
               
55-208
               

               
Cow position:
               
chr13:31529750-31529903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
143, 13
               

               
Conread position:
               
55-251
               

               
Cow position:
               
chr13:25428351-25428167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
55-411
               

               
Cow position:
               
chr13:20839438-20839781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
55-413
               

               
Cow position:
               
chr13:15885148-15884797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 12
               

               
Conread position:
               
55-413
               

               
Cow position:
               
chr13:43194041-43194391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 149
               

               
Conread position:
               
55-460
               

               
Cow position:
               
chr13:37981872-37981478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
232, 73
               

               
Conread position:
               
55-462
               

               
Cow position:
               
chr13:12574508-12574910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
55-462
               

               
Cow position:
               
chr13:15166690-15167092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 76
               

               
Conread position:
               
56-335
               

               
Cow position:
               
chr13:37947078-37946808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
57-335
               

               
Cow position:
               
chr13:17966335-17966064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
57-413
               

               
Cow position:
               
chr13:8524743-8524406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
58-413
               

               
Cow position:
               
chr13:47356527-47356844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
340, 20
               

               
Conread position:
               
60-303
               

               
Cow position:
               
chr13:47322533-47322291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
152, 95
               

               
Conread position:
               
61-249
               

               
Cow position:
               
chr13:18181897-18181714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
61-304
               

               
Cow position:
               
chr13:56677893-56678129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
232, 57
               

               
Conread position:
               
61-376
               

               
Cow position:
               
chr13:15110192-15110503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 94
               

               
Conread position:
               
61-439
               

               
Cow position:
               
chr13:12202240-12202608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
62-152
               

               
Cow position:
               
chr13:16156346-16156256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-462
               

               
Cow position:
               
chr13:43139335-43138953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
228, 73
               

               
Conread position:
               
63-339
               

               
Cow position:
               
chr13:15902904-15903165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
64-394
               

               
Cow position:
               
chr13:8652561-8652240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
232, 91
               

               
Conread position:
               
64-409
               

               
Cow position:
               
chr13:15529156-15528819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
64-413
               

               
Cow position:
               
chr13:6061127-6060791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
65-185
               

               
Cow position:
               
chr13:18866608-18866727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
68-195
               

               
Cow position:
               
chr13:60393669-60393794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
68-215
               

               
Cow position:
               
chr13:47634392-47634536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
68-258
               

               
Cow position:
               
chr13:29123189-29123373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
68-273
               

               
Cow position:
               
chr13:27173033-27172829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
83, 139
               

               
Conread position:
               
68-413
               

               
Cow position:
               
chr13:890287-889963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
68-460
               

               
Cow position:
               
chr13:6153899-6153505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 87
               

               
Conread position:
               
68-460
               

               
Cow position:
               
chr13:17622174-17622558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 9
               

               
Conread position:
               
70-278
               

               
Cow position:
               
chr13:48862208-48862008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
70-348
               

               
Cow position:
               
chr13:32657913-32657640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
195, 87
               

               
Conread position:
               
71-311
               

               
Cow position:
               
chr13:34555940-34555711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
72-209
               

               
Cow position:
               
chr13:19183757-19183894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
75-344
               

               
Cow position:
               
chr13:62600899-62601159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
75-413
               

               
Cow position:
               
chr13:8201591-8201271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
80-331
               

               
Cow position:
               
chr13:48375736-48375504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
81-411
               

               
Cow position:
               
chr13:52879300-52879626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
81-452
               

               
Cow position:
               
chr13:36353059-36352704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
224, 74
               

               
Conread position:
               
81-460
               

               
Cow position:
               
chr13:25531892-25531516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 63
               

               
Conread position:
               
82-456
               

               
Cow position:
               
chr13:18243761-18244125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
205, 73
               

               
Conread position:
               
83-338
               

               
Cow position:
               
chr13:23512270-23512515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
210, 72
               

               
Conread position:
               
88-333
               

               
Cow position:
               
chr13:52929616-52929852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
197, 67
               

               
Conread position:
               
90-407
               

               
Cow position:
               
chr13:11955210-11954903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
90-448
               

               
Cow position:
               
chr13:15233833-15234172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 63
               

               
Conread position:
               
91-462
               

               
Cow position:
               
chr13:17613248-17613622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
92-462
               

               
Cow position:
               
chr13:34941741-34941381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
134, 108
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr13:25062323-25062633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
94-386
               

               
Cow position:
               
chr13:12619205-12618920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
95-462
               

               
Cow position:
               
chr13:19138352-19138713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
99-411
               

               
Cow position:
               
chr13:53536392-53536091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
100-246
               

               
Cow position:
               
chr13:23480522-23480386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
102-462
               

               
Cow position:
               
chr13:13306015-13306382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
102-462
               

               
Cow position:
               
chr13:31808440-31808788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
185, 53
               

               
Conread position:
               
102-462
               

               
Cow position:
               
chr13:43151019-43151383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
283, 62
               

               
Conread position:
               
106-459
               

               
Cow position:
               
chr13:54975886-54975532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
111-413
               

               
Cow position:
               
chr13:24376421-24376706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
111-413
               

               
Cow position:
               
chr13:41253549-41253831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
114-462
               

               
Cow position:
               
chr13:21155569-21155215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
115-315
               

               
Cow position:
               
chr13:626489-626685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
151, 39
               

               
Conread position:
               
118-411
               

               
Cow position:
               
chr13:2463300-2463015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
165, 37
               

               
Conread position:
               
121-327
               

               
Cow position:
               
chr13:10099050-10098854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
121-330
               

               
Cow position:
               
chr13:6455313-6455508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
124-413
               

               
Cow position:
               
chr13:30693655-30693917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
128-432
               

               
Cow position:
               
chr13:37521431-37521144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
294, 26
               

               
Conread position:
               
128-459
               

               
Cow position:
               
chr13:19178215-19178546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
159, 69
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr13:1779777-1780045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
144-413
               

               
Cow position:
               
chr13:52922054-52922304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
145-455
               

               
Cow position:
               
chr13:16834115-16833821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
97, 51
               

               
Conread position:
               
146-413
               

               
Cow position:
               
chr13:12682585-12682325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
149-460
               

               
Cow position:
               
chr13:5752464-5752149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
150-346
               

               
Cow position:
               
chr13:7789972-7790170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
150-459
               

               
Cow position:
               
chr13:8472936-8473248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 53
               

               
Conread position:
               
152-462
               

               
Cow position:
               
chr13:3701406-3701708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
263, 11
               

               
Conread position:
               
154-377
               

               
Cow position:
               
chr13:28652770-28652985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 43
               

               
Conread position:
               
156-452
               

               
Cow position:
               
chr13:47312888-47313169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
258, 50
               

               
Conread position:
               
156-460
               

               
Cow position:
               
chr13:5091698-5091387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 21
               

               
Conread position:
               
156-462
               

               
Cow position:
               
chr13:13265777-13266077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
257, 44
               

               
Conread position:
               
157-411
               

               
Cow position:
               
chr13:20041998-20041747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
158-451
               

               
Cow position:
               
chr13:20864043-20863756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
41, 49
               

               
Conread position:
               
159-412
               

               
Cow position:
               
chr13:52199060-52199304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
164-363
               

               
Cow position:
               
chr13:18941855-18942051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
164-437
               

               
Cow position:
               
chr13:563164-562898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
166-412
               

               
Cow position:
               
chr13:20536484-20536715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
171-378
               

               
Cow position:
               
chr13:21189260-21189462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
171-413
               

               
Cow position:
               
chr13:54237339-54237562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
171-462
               

               
Cow position:
               
chr13:25249172-25248868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
173-413
               

               
Cow position:
               
chr13:9884755-9884984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
177-460
               

               
Cow position:
               
chr13:15172422-15172135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 26
               

               
Conread position:
               
180-460
               

               
Cow position:
               
chr13:19426703-19426424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
227, 26
               

               
Conread position:
               
189-462
               

               
Cow position:
               
chr13:21708187-21708457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
217, 26
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr13:54381935-54381718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
192-459
               

               
Cow position:
               
chr13:34556333-34556076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr13:21209862-21210078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr13:46458626-46458838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
195-413
               

               
Cow position:
               
chr13:54331026-54331235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
201-462
               

               
Cow position:
               
chr13:15740074-15740339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 151
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr13:18551460-18551671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
228-448
               

               
Cow position:
               
chr13:22025671-22025454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 132
               

               
Conread position:
               
229-462
               

               
Cow position:
               
chr13:38484870-38485103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
230-455
               

               
Cow position:
               
chr13:57323493-57323716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
232-460
               

               
Cow position:
               
chr13:14927277-14927511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 115
               
Show alignments to all cow chromosomes.