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Cow genome map

           
Conread name:
           
rpigcf0_001345.y1
        

               
Conread position:
               
1-460
               

               
Cow position:
               
chr18:31672381-31672824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 54
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr18:55736834-55736684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr18:54973875-54974251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 62
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr18:23446923-23447352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 352
               

               
Conread position:
               
3-458
               

               
Cow position:
               
chr18:17005387-17004931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
4-149
               

               
Cow position:
               
chr18:27637629-27637478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
4-151
               

               
Cow position:
               
chr18:21528784-21528631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
4-153
               

               
Cow position:
               
chr18:49161166-49161321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
4-155
               

               
Cow position:
               
chr18:50004572-50004722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr18:47824640-47824829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr18:35367068-35367259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr18:31711443-31711698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr18:5766542-5766225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr18:48713676-48713351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
5-119
               

               
Cow position:
               
chr18:8390318-8390206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
5-121
               

               
Cow position:
               
chr18:10757924-10758041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
5-126
               

               
Cow position:
               
chr18:17007351-17007471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
5-136
               

               
Cow position:
               
chr18:44205956-44206085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
5-151
               

               
Cow position:
               
chr18:56463595-56463746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
5-165
               

               
Cow position:
               
chr18:11434885-11434725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
5-182
               

               
Cow position:
               
chr18:19433891-19433718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
5-185
               

               
Cow position:
               
chr18:14172080-14172255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr18:31557024-31557220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 156
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr18:15173140-15172947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr18:37189159-37189369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
5-222
               

               
Cow position:
               
chr18:14225524-14225308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
179, 148
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr18:19868125-19868352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr18:4872191-4871952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
248, 12
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr18:8170958-8171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr18:23821696-23821995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr18:52877481-52877181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
5-346
               

               
Cow position:
               
chr18:247564-247886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr18:39623937-39623594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
44, 157
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr18:23714756-23715090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
5-413
               

               
Cow position:
               
chr18:11779786-11779403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
5-439
               

               
Cow position:
               
chr18:36264648-36265083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
5-456
               

               
Cow position:
               
chr18:3417299-3416856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr18:7965365-7964911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 142
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr18:12117720-12118166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr18:12242410-12241954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
5-460
               

               
Cow position:
               
chr18:28101763-28101305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr18:39662914-39662454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 88
               

               
Conread position:
               
6-104
               

               
Cow position:
               
chr18:18520669-18520770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
6-121
               

               
Cow position:
               
chr18:4907279-4907161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
6-121
               

               
Cow position:
               
chr18:47680642-47680528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
6-121
               

               
Cow position:
               
chr18:47865199-47865085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
6-122
               

               
Cow position:
               
chr18:4485728-4485612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-126
               

               
Cow position:
               
chr18:50276110-50276234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
6-131
               

               
Cow position:
               
chr18:43014738-43014863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-132
               

               
Cow position:
               
chr18:39972659-39972534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr18:44548614-44548744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
6-135
               

               
Cow position:
               
chr18:38228532-38228407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-135
               

               
Cow position:
               
chr18:47096558-47096429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
6-135
               

               
Cow position:
               
chr18:50018605-50018731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-136
               

               
Cow position:
               
chr18:50283690-50283817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr18:12143819-12143952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr18:9596309-9596179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr18:21143836-21143968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
6-140
               

               
Cow position:
               
chr18:55722632-55722496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-141
               

               
Cow position:
               
chr18:47419927-47419793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
6-150
               

               
Cow position:
               
chr18:21187431-21187291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
6-151
               

               
Cow position:
               
chr18:17195214-17195361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-152
               

               
Cow position:
               
chr18:8208291-8208442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
6-152
               

               
Cow position:
               
chr18:11857028-11856884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr18:24022747-24022600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr18:31159140-31159291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr18:34490413-34490262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr18:51413718-51413576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
6-155
               

               
Cow position:
               
chr18:47801964-47802110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
6-159
               

               
Cow position:
               
chr18:2108380-2108225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
6-160
               

               
Cow position:
               
chr18:43125209-43125063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
6-160
               

               
Cow position:
               
chr18:43400590-43400738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-163
               

               
Cow position:
               
chr18:697087-697245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr18:28322785-28322629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr18:49602910-49603071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 151
               

               
Conread position:
               
6-169
               

               
Cow position:
               
chr18:41702966-41702805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
6-171
               

               
Cow position:
               
chr18:39460349-39460186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr18:4804135-4804306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr18:41724679-41724853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr18:48407869-48407702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr18:42427748-42427574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr18:49655813-49655639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr18:4152421-4152601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
6-185
               

               
Cow position:
               
chr18:2793844-2794019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
6-185
               

               
Cow position:
               
chr18:50632313-50632490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr18:9846287-9846462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr18:35827243-35827430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr18:44917886-44917701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr18:51192613-51192798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr18:40047372-40047558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr18:46880028-46880229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr18:44909184-44908992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 149
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr18:45558275-45558086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr18:135528-135716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr18:15809679-15809864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr18:5647940-5647750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr18:47565949-47565764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
6-201
               

               
Cow position:
               
chr18:47920881-47920676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr18:52649207-52649412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 158
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr18:18844143-18843946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr18:38937952-38937755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 149
               

               
Conread position:
               
6-205
               

               
Cow position:
               
chr18:51383266-51383463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr18:38601753-38601955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr18:47547847-47548056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr18:21782821-21782618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr18:24719440-24719241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr18:4489769-4489981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr18:50359457-50359257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr18:52414106-52413889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 155
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr18:6470224-6470018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
179, 147
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr18:38806699-38806508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr18:10051881-10051667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr18:22516404-22516615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr18:47417132-47416900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr18:32189382-32189607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
202, 47
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chr18:22568936-22569164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr18:25598101-25598345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 214
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr18:49015248-49015024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
6-248
               

               
Cow position:
               
chr18:22180649-22180890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr18:19765318-19765074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
199, 149
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr18:43796827-43797063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr18:15517042-15517301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
6-267
               

               
Cow position:
               
chr18:35535015-35535275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr18:49038591-49038335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr18:49017618-49017365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-281
               

               
Cow position:
               
chr18:22055730-22056018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 153
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr18:3085375-3085654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr18:25006374-25006628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr18:10214059-10214336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
46, 168
               

               
Conread position:
               
6-283
               

               
Cow position:
               
chr18:42290202-42290463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr18:37303286-37302995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr18:1571107-1571386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr18:5632397-5632116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr18:29474870-29474591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr18:50095277-50095543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr18:2146460-2146736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 29
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr18:20462575-20462851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
6-304
               

               
Cow position:
               
chr18:35874210-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
6-310
               

               
Cow position:
               
chr18:43950960-43950656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr18:2774004-2774299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr18:55747820-55747506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr18:28930509-28930810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 35
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr18:9066832-9066510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 203
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr18:12273786-12273464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
291, 11
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr18:46276167-46276498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr18:8300157-8299822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
6-338
               

               
Cow position:
               
chr18:5072285-5072606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr18:1399220-1399554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr18:18961700-18962039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr18:3193841-3193501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr18:3209851-3209511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
189, 77
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr18:4495758-4496091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr18:30341050-30341379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 143
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr18:3212012-3211668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 154
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr18:7417041-7416731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr18:48452198-48451848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
6-353
               

               
Cow position:
               
chr18:7109263-7108915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr18:381048-380728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr18:16545330-16545691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr18:10977080-10977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 131
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr18:33896279-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 278
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr18:18592596-18592233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr18:17390858-17391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
6-407
               

               
Cow position:
               
chr18:5578427-5578045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
6-410
               

               
Cow position:
               
chr18:12023507-12023893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr18:10904979-10904586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 64
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr18:54572156-54572558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 77
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:1144057-1144457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:6310212-6309817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:10322928-10322537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 31
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:12059126-12058754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:15613732-15614111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 48
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:19193240-19193613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:28657782-28658177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 147
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:29356501-29356893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:33159075-33158700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:33300021-33299634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:45903764-45904155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:46048886-46048498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 142
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr18:47512131-47511732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr18:49100253-49100632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
6-420
               

               
Cow position:
               
chr18:39114983-39115414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 361
               

               
Conread position:
               
6-427
               

               
Cow position:
               
chr18:55499202-55498778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 100
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr18:31082211-31082612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 155
               

               
Conread position:
               
6-432
               

               
Cow position:
               
chr18:42747730-42747313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 149
               

               
Conread position:
               
6-432
               

               
Cow position:
               
chr18:46452751-46453162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
6-448
               

               
Cow position:
               
chr18:29648912-29648477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 74
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr18:51757226-51756783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr18:6881224-6881657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
6-458
               

               
Cow position:
               
chr18:11867470-11867034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
6-459
               

               
Cow position:
               
chr18:55000605-55001056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:3180542-3180099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 153
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:7956283-7955827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 200
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:9366054-9365591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 203
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:9974198-9974646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:11791052-11790611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:20174005-20174451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 16
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:30360011-30360441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 157
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:43283624-43284072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:44262755-44262298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 44
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:51691332-51691789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:55692950-55692501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
6-460
               

               
Cow position:
               
chr18:56181327-56181776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 89
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr18:14586347-14586798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 31
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:5189559-5190002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:9010837-9010409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:19849639-19850067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 37
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:22120751-22121203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:26939106-26938662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 21
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:29372002-29371544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:39001682-39002118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:51405782-51406218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 92
               

               
Conread position:
               
6-462
               

               
Cow position:
               
chr18:55120001-55119551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
7-108
               

               
Cow position:
               
chr18:6102832-6102936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
7-125
               

               
Cow position:
               
chr18:56177054-56176934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
7-142
               

               
Cow position:
               
chr18:49440974-49440834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
7-151
               

               
Cow position:
               
chr18:45897858-45897716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
7-165
               

               
Cow position:
               
chr18:34444606-34444761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
7-169
               

               
Cow position:
               
chr18:35786184-35786024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
7-181
               

               
Cow position:
               
chr18:11754264-11754086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
43, 154
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr18:4626659-4626863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
7-218
               

               
Cow position:
               
chr18:52251723-52251938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
34, 140
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr18:17974755-17974547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr18:23630484-23630703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-267
               

               
Cow position:
               
chr18:52402829-52403096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
47, 157
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr18:51643238-51643504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
7-282
               

               
Cow position:
               
chr18:24266272-24266549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 155
               

               
Conread position:
               
7-305
               

               
Cow position:
               
chr18:23623499-23623796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 85
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr18:16313507-16313191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
278, 121
               

               
Conread position:
               
7-407
               

               
Cow position:
               
chr18:20126423-20126044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr18:12113237-12113629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 112
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr18:18918832-18919216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 97
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr18:20641370-20641748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 44
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr18:38985822-38985424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 36
               

               
Conread position:
               
7-420
               

               
Cow position:
               
chr18:42454888-42455290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
7-427
               

               
Cow position:
               
chr18:42479449-42479868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
7-460
               

               
Cow position:
               
chr18:4884388-4884836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
7-460
               

               
Cow position:
               
chr18:29065261-29065695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 42
               

               
Conread position:
               
8-111
               

               
Cow position:
               
chr18:6828991-6829098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
8-129
               

               
Cow position:
               
chr18:50263798-50263917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
8-144
               

               
Cow position:
               
chr18:306586-306728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
8-151
               

               
Cow position:
               
chr18:82101-81956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
8-239
               

               
Cow position:
               
chr18:9040574-9040807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
35, 150
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr18:20480814-20481071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
8-347
               

               
Cow position:
               
chr18:42431962-42432297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 119
               

               
Conread position:
               
8-413
               

               
Cow position:
               
chr18:11691276-11691675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
8-413
               

               
Cow position:
               
chr18:22789960-22790338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
8-457
               

               
Cow position:
               
chr18:3132643-3133060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
399, 123
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr18:38607346-38606915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 19
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr18:51867425-51867645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr18:34834625-34834369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
9-406
               

               
Cow position:
               
chr18:11184068-11183685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
9-412
               

               
Cow position:
               
chr18:7951249-7950851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr18:10954593-10954211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
10-123
               

               
Cow position:
               
chr18:53560972-53560861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
10-139
               

               
Cow position:
               
chr18:32290835-32290708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
10-140
               

               
Cow position:
               
chr18:22045283-22045418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
10-140
               

               
Cow position:
               
chr18:35857796-35857929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
10-151
               

               
Cow position:
               
chr18:16356357-16356500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
10-152
               

               
Cow position:
               
chr18:29390073-29390213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr18:23898544-23898400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr18:33492479-33492342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr18:45186003-45185854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
10-157
               

               
Cow position:
               
chr18:24946208-24946065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
145, 41
               

               
Conread position:
               
10-189
               

               
Cow position:
               
chr18:47486174-47485992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
10-195
               

               
Cow position:
               
chr18:46647035-46647223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr18:8949669-8949890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
10-255
               

               
Cow position:
               
chr18:24759531-24759768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
10-263
               

               
Cow position:
               
chr18:50959617-50959365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr18:55549860-55549595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr18:19688156-19687880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr18:30225401-30225682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr18:48242311-48242049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
10-292
               

               
Cow position:
               
chr18:6005369-6005644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
10-293
               

               
Cow position:
               
chr18:24508096-24508390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 210
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr18:50205669-50205957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
10-313
               

               
Cow position:
               
chr18:30586108-30586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
10-314
               

               
Cow position:
               
chr18:10891640-10891343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr18:858953-858616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
10-346
               

               
Cow position:
               
chr18:4629173-4628829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
10-347
               

               
Cow position:
               
chr18:7414906-7415233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr18:32873723-32873323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr18:26999017-26998602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
10-413
               

               
Cow position:
               
chr18:55788865-55789255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 134
               

               
Conread position:
               
10-462
               

               
Cow position:
               
chr18:10576231-10575789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
10-462
               

               
Cow position:
               
chr18:29958045-29958469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
11-195
               

               
Cow position:
               
chr18:237986-238172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 150
               

               
Conread position:
               
11-292
               

               
Cow position:
               
chr18:36768689-36768954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
11-413
               

               
Cow position:
               
chr18:55505531-55505137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr18:32600186-32599982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
12-252
               

               
Cow position:
               
chr18:53642624-53642862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr18:2863871-2864202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 38
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr18:55782307-55782684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
16-458
               

               
Cow position:
               
chr18:4797082-4796650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 8
               

               
Conread position:
               
17-150
               

               
Cow position:
               
chr18:21664597-21664726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
17-196
               

               
Cow position:
               
chr18:48962060-48961875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
17-462
               

               
Cow position:
               
chr18:4748764-4749204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 68
               

               
Conread position:
               
17-462
               

               
Cow position:
               
chr18:9089815-9089382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 35
               

               
Conread position:
               
18-411
               

               
Cow position:
               
chr18:11377479-11377103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
269, 34
               

               
Conread position:
               
19-304
               

               
Cow position:
               
chr18:51515146-51515428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
19-462
               

               
Cow position:
               
chr18:28793956-28794389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
20-148
               

               
Cow position:
               
chr18:19809565-19809695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
20-298
               

               
Cow position:
               
chr18:51643897-51644177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
22-117
               

               
Cow position:
               
chr18:51393340-51393434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
22-413
               

               
Cow position:
               
chr18:7650102-7649731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
23-312
               

               
Cow position:
               
chr18:48633885-48633623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
24-460
               

               
Cow position:
               
chr18:29058388-29058813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
25-204
               

               
Cow position:
               
chr18:24342954-24342774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
25-412
               

               
Cow position:
               
chr18:51655935-51656315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
262, 26
               

               
Conread position:
               
25-413
               

               
Cow position:
               
chr18:39875148-39875521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr18:21195225-21195660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 185
               

               
Conread position:
               
26-454
               

               
Cow position:
               
chr18:38344919-38344489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
27-195
               

               
Cow position:
               
chr18:2773284-2773450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
27-195
               

               
Cow position:
               
chr18:2776787-2776953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
27-330
               

               
Cow position:
               
chr18:47835938-47835639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
27-462
               

               
Cow position:
               
chr18:55553076-55552642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
29-411
               

               
Cow position:
               
chr18:5711546-5711928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
29-411
               

               
Cow position:
               
chr18:13360163-13359801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
31-135
               

               
Cow position:
               
chr18:10355487-10355384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
31-178
               

               
Cow position:
               
chr18:11672146-11672002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
31-337
               

               
Cow position:
               
chr18:27109183-27109491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
31-371
               

               
Cow position:
               
chr18:39434930-39434602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
32-167
               

               
Cow position:
               
chr18:41011080-41011213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
32-413
               

               
Cow position:
               
chr18:50082154-50082508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
33-212
               

               
Cow position:
               
chr18:23505431-23505257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
34-208
               

               
Cow position:
               
chr18:47705338-47705164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
34-439
               

               
Cow position:
               
chr18:42431505-42431897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
35-153
               

               
Cow position:
               
chr18:53962330-53962444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:47693165-47693005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr18:42292955-42293191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
35-285
               

               
Cow position:
               
chr18:54130230-54130476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
37-263
               

               
Cow position:
               
chr18:23162982-23162772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
37-318
               

               
Cow position:
               
chr18:56190863-56191147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 104
               

               
Conread position:
               
37-412
               

               
Cow position:
               
chr18:22214588-22214225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
37-413
               

               
Cow position:
               
chr18:34526998-34527365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
37-439
               

               
Cow position:
               
chr18:2592070-2592463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 95
               

               
Conread position:
               
37-460
               

               
Cow position:
               
chr18:35012222-35012627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 9
               

               
Conread position:
               
37-460
               

               
Cow position:
               
chr18:37023452-37023877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 110
               

               
Conread position:
               
38-136
               

               
Cow position:
               
chr18:23921605-23921703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-166
               

               
Cow position:
               
chr18:49982827-49982699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-176
               

               
Cow position:
               
chr18:21768710-21768573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
38-198
               

               
Cow position:
               
chr18:49324341-49324495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
156, 7
               

               
Conread position:
               
38-208
               

               
Cow position:
               
chr18:20175100-20175265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr18:41950298-41950134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
38-232
               

               
Cow position:
               
chr18:9176994-9176811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
38-237
               

               
Cow position:
               
chr18:32252071-32252264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
38-304
               

               
Cow position:
               
chr18:4556073-4556330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
246, 22
               

               
Conread position:
               
38-331
               

               
Cow position:
               
chr18:16686240-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
38-374
               

               
Cow position:
               
chr18:51392546-51392870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
249, 106
               

               
Conread position:
               
38-402
               

               
Cow position:
               
chr18:17649645-17649988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr18:20270917-20271283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 82
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr18:25647150-25647513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr18:46727687-46727333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr18:48453769-48453430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
38-413
               

               
Cow position:
               
chr18:50382341-50381994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 17
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr18:3158497-3158919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 109
               

               
Conread position:
               
38-458
               

               
Cow position:
               
chr18:10656537-10656127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr18:19273001-19273420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 13
               

               
Conread position:
               
38-460
               

               
Cow position:
               
chr18:51178631-51179066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
142, 106
               

               
Conread position:
               
38-462
               

               
Cow position:
               
chr18:12775687-12776096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
39-152
               

               
Cow position:
               
chr18:42978549-42978659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
39-190
               

               
Cow position:
               
chr18:2765345-2765200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
39-260
               

               
Cow position:
               
chr18:12584743-12584961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
146, 105
               

               
Conread position:
               
39-269
               

               
Cow position:
               
chr18:19883629-19883403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
39-283
               

               
Cow position:
               
chr18:49841373-49841138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
39-292
               

               
Cow position:
               
chr18:16997350-16997103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
234, 105
               

               
Conread position:
               
39-299
               

               
Cow position:
               
chr18:52855152-52854893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 117
               

               
Conread position:
               
39-322
               

               
Cow position:
               
chr18:43555428-43555704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
39-338
               

               
Cow position:
               
chr18:19896355-19896651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 116
               

               
Conread position:
               
39-413
               

               
Cow position:
               
chr18:47517111-47517472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
39-458
               

               
Cow position:
               
chr18:21102681-21103076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
248, 16
               

               
Conread position:
               
39-460
               

               
Cow position:
               
chr18:52634975-52635402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
39-462
               

               
Cow position:
               
chr18:7359841-7359414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 105
               

               
Conread position:
               
39-462
               

               
Cow position:
               
chr18:19646271-19645855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
40-154
               

               
Cow position:
               
chr18:35715515-35715630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
40-198
               

               
Cow position:
               
chr18:46072558-46072402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
40-279
               

               
Cow position:
               
chr18:42988212-42988449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
40-333
               

               
Cow position:
               
chr18:23430041-23429746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 160
               

               
Conread position:
               
40-347
               

               
Cow position:
               
chr18:1954494-1954794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 113
               

               
Conread position:
               
40-407
               

               
Cow position:
               
chr18:15880745-15881114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
40-412
               

               
Cow position:
               
chr18:56159556-56159203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 62
               

               
Conread position:
               
40-413
               

               
Cow position:
               
chr18:28923754-28924094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
41-129
               

               
Cow position:
               
chr18:37810239-37810327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
41-201
               

               
Cow position:
               
chr18:27388677-27388522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
41-231
               

               
Cow position:
               
chr18:4624056-4624236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr18:5078680-5078869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
41-245
               

               
Cow position:
               
chr18:53038926-53038724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
41-256
               

               
Cow position:
               
chr18:4534929-4535129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 104
               

               
Conread position:
               
41-259
               

               
Cow position:
               
chr18:7077048-7076840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
41-259
               

               
Cow position:
               
chr18:34219824-34220037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
41-325
               

               
Cow position:
               
chr18:36201534-36201808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 113
               

               
Conread position:
               
41-347
               

               
Cow position:
               
chr18:36230633-36230922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
41-347
               

               
Cow position:
               
chr18:45637322-45637596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
41-393
               

               
Cow position:
               
chr18:33008160-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
41-462
               

               
Cow position:
               
chr18:2849173-2849584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
42-181
               

               
Cow position:
               
chr18:47410636-47410499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
42-432
               

               
Cow position:
               
chr18:25282462-25282838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 22
               

               
Conread position:
               
43-178
               

               
Cow position:
               
chr18:45985534-45985666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
43-218
               

               
Cow position:
               
chr18:18699225-18699058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
43-265
               

               
Cow position:
               
chr18:33883872-33883662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
43-362
               

               
Cow position:
               
chr18:21740722-21741031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 112
               

               
Conread position:
               
43-460
               

               
Cow position:
               
chr18:36459023-36458613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
44-151
               

               
Cow position:
               
chr18:8163722-8163831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
44-170
               

               
Cow position:
               
chr18:49197510-49197385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
44-252
               

               
Cow position:
               
chr18:11312845-11313048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
44-414
               

               
Cow position:
               
chr18:33157906-33157557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
44-460
               

               
Cow position:
               
chr18:11322687-11322268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 111
               

               
Conread position:
               
45-148
               

               
Cow position:
               
chr18:23027079-23027182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-413
               

               
Cow position:
               
chr18:30794516-30794171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
45-456
               

               
Cow position:
               
chr18:37002722-37002314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 109
               

               
Conread position:
               
45-457
               

               
Cow position:
               
chr18:38687170-38686777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 95
               

               
Conread position:
               
46-201
               

               
Cow position:
               
chr18:16379015-16378859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
46-263
               

               
Cow position:
               
chr18:11891817-11891614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
46-347
               

               
Cow position:
               
chr18:47828907-47828622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 82
               

               
Conread position:
               
46-411
               

               
Cow position:
               
chr18:7952292-7951939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 105
               

               
Conread position:
               
46-460
               

               
Cow position:
               
chr18:12270590-12270171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
47-160
               

               
Cow position:
               
chr18:5733808-5733697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
47-195
               

               
Cow position:
               
chr18:44523173-44523030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
47-266
               

               
Cow position:
               
chr18:47966838-47967047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
47-312
               

               
Cow position:
               
chr18:51850476-51850729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
238, 71
               

               
Conread position:
               
47-372
               

               
Cow position:
               
chr18:48828687-48829009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 81
               

               
Conread position:
               
47-388
               

               
Cow position:
               
chr18:24855755-24856083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
47-411
               

               
Cow position:
               
chr18:47525495-47525145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 8
               

               
Conread position:
               
47-438
               

               
Cow position:
               
chr18:20127016-20127391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
47-460
               

               
Cow position:
               
chr18:45104350-45104767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 100
               

               
Conread position:
               
49-411
               

               
Cow position:
               
chr18:56184021-56183676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
49-459
               

               
Cow position:
               
chr18:33407695-33407302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
50-335
               

               
Cow position:
               
chr18:36746174-36746447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
211, 119
               

               
Conread position:
               
50-411
               

               
Cow position:
               
chr18:6609766-6610118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 111
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr18:17660476-17660669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
195, 104
               

               
Conread position:
               
51-292
               

               
Cow position:
               
chr18:51594720-51594951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
51-399
               

               
Cow position:
               
chr18:25984493-25984823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
338, 17
               

               
Conread position:
               
52-282
               

               
Cow position:
               
chr18:7963511-7963305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
52-292
               

               
Cow position:
               
chr18:46135824-46135593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
52-315
               

               
Cow position:
               
chr18:50974210-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
52-413
               

               
Cow position:
               
chr18:19620024-19619685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
54-413
               

               
Cow position:
               
chr18:23766328-23766679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
55-234
               

               
Cow position:
               
chr18:56301972-56301798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
55-413
               

               
Cow position:
               
chr18:31586295-31586627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
238, 89
               

               
Conread position:
               
55-439
               

               
Cow position:
               
chr18:29796348-29796715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
321, 100
               

               
Conread position:
               
56-243
               

               
Cow position:
               
chr18:20798407-20798219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 148
               

               
Conread position:
               
56-373
               

               
Cow position:
               
chr18:2619134-2619420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr18:4539803-4540193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 94
               

               
Conread position:
               
57-406
               

               
Cow position:
               
chr18:11685060-11684732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
59-356
               

               
Cow position:
               
chr18:18369286-18369577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 14
               

               
Conread position:
               
59-448
               

               
Cow position:
               
chr18:45571088-45570712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 35
               

               
Conread position:
               
59-460
               

               
Cow position:
               
chr18:44801813-44802204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 94
               

               
Conread position:
               
60-194
               

               
Cow position:
               
chr18:21081817-21081948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
61-196
               

               
Cow position:
               
chr18:49981365-49981498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
61-283
               

               
Cow position:
               
chr18:42751529-42751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
61-304
               

               
Cow position:
               
chr18:11578148-11577927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
61-327
               

               
Cow position:
               
chr18:51190525-51190775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
61-412
               

               
Cow position:
               
chr18:50637399-50637725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
61-413
               

               
Cow position:
               
chr18:29760101-29759788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
61-462
               

               
Cow position:
               
chr18:3166415-3166799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
63-414
               

               
Cow position:
               
chr18:47183221-47183548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
64-206
               

               
Cow position:
               
chr18:41511432-41511573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
64-302
               

               
Cow position:
               
chr18:3370971-3370739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
64-342
               

               
Cow position:
               
chr18:54111279-54111020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
64-413
               

               
Cow position:
               
chr18:21176258-21175919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
198, 80
               

               
Conread position:
               
64-438
               

               
Cow position:
               
chr18:3184219-3183880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
357, 48
               

               
Conread position:
               
64-448
               

               
Cow position:
               
chr18:55397370-55397005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
224, 30
               

               
Conread position:
               
68-261
               

               
Cow position:
               
chr18:52406759-52406583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
68-460
               

               
Cow position:
               
chr18:4182121-4182508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 23
               

               
Conread position:
               
68-462
               

               
Cow position:
               
chr18:13507673-13508049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 43
               

               
Conread position:
               
68-462
               

               
Cow position:
               
chr18:56166048-56165660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
186, 76
               

               
Conread position:
               
69-409
               

               
Cow position:
               
chr18:23476621-23476933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
69-413
               

               
Cow position:
               
chr18:4381359-4381031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
69-413
               

               
Cow position:
               
chr18:51212249-51211918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 46
               

               
Conread position:
               
70-412
               

               
Cow position:
               
chr18:32773943-32773617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
70-462
               

               
Cow position:
               
chr18:55461644-55462032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 22
               

               
Conread position:
               
73-452
               

               
Cow position:
               
chr18:44483711-44484071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 80
               

               
Conread position:
               
81-458
               

               
Cow position:
               
chr18:40759261-40758897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 63
               

               
Conread position:
               
81-460
               

               
Cow position:
               
chr18:45961217-45961580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
261, 74
               

               
Conread position:
               
83-460
               

               
Cow position:
               
chr18:55589440-55589796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
330, 50
               

               
Conread position:
               
84-217
               

               
Cow position:
               
chr18:35420081-35419950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
84-462
               

               
Cow position:
               
chr18:11618519-11618159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
85-337
               

               
Cow position:
               
chr18:52703796-52704047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
88-413
               

               
Cow position:
               
chr18:25206141-25206455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
90-413
               

               
Cow position:
               
chr18:15025717-15025416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
91-331
               

               
Cow position:
               
chr18:4601974-4602198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
91-458
               

               
Cow position:
               
chr18:14815304-14815654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
322, 37
               

               
Conread position:
               
93-459
               

               
Cow position:
               
chr18:5487284-5486931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 38
               

               
Conread position:
               
94-413
               

               
Cow position:
               
chr18:3027319-3027628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
95-462
               

               
Cow position:
               
chr18:4927109-4926751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
316, 66
               

               
Conread position:
               
97-459
               

               
Cow position:
               
chr18:30248101-30248448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
99-383
               

               
Cow position:
               
chr18:896066-895794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 57
               

               
Conread position:
               
106-442
               

               
Cow position:
               
chr18:4857858-4858212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 253
               

               
Conread position:
               
108-307
               

               
Cow position:
               
chr18:4952183-4952373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
109-459
               

               
Cow position:
               
chr18:43065556-43065192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
176, 60
               

               
Conread position:
               
111-263
               

               
Cow position:
               
chr18:45079449-45079595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
111-394
               

               
Cow position:
               
chr18:12809879-12809615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
111-460
               

               
Cow position:
               
chr18:6103073-6103424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
212, 42
               

               
Conread position:
               
112-460
               

               
Cow position:
               
chr18:11832143-11831817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
294, 42
               

               
Conread position:
               
114-391
               

               
Cow position:
               
chr18:219359-219091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
115-459
               

               
Cow position:
               
chr18:14048729-14048392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 29
               

               
Conread position:
               
118-462
               

               
Cow position:
               
chr18:32121051-32121384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
166, 10
               

               
Conread position:
               
119-335
               

               
Cow position:
               
chr18:19887563-19887766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
123-460
               

               
Cow position:
               
chr18:21205381-21205068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
131-397
               

               
Cow position:
               
chr18:20481878-20482121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
131-461
               

               
Cow position:
               
chr18:44548908-44549226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
291, 18
               

               
Conread position:
               
132-458
               

               
Cow position:
               
chr18:35636343-35636670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
132-460
               

               
Cow position:
               
chr18:7487256-7486931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr18:33606627-33606369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 52
               

               
Conread position:
               
142-459
               

               
Cow position:
               
chr18:81743-81436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
143-448
               

               
Cow position:
               
chr18:24022382-24022075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
145-389
               

               
Cow position:
               
chr18:42966858-42966615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
147-320
               

               
Cow position:
               
chr18:10861439-10861615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
148-413
               

               
Cow position:
               
chr18:52632418-52632667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
192, 46
               

               
Conread position:
               
149-335
               

               
Cow position:
               
chr18:15340456-15340638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
156-346
               

               
Cow position:
               
chr18:14085445-14085258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
156-411
               

               
Cow position:
               
chr18:36478184-36477934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
157-412
               

               
Cow position:
               
chr18:35582117-35582364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
157-413
               

               
Cow position:
               
chr18:11166961-11166716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
162-448
               

               
Cow position:
               
chr18:17380543-17380272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
163-460
               

               
Cow position:
               
chr18:35076367-35076066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 175
               

               
Conread position:
               
164-413
               

               
Cow position:
               
chr18:11680697-11680457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
164-462
               

               
Cow position:
               
chr18:18562563-18562861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
164-462
               

               
Cow position:
               
chr18:49161463-49161779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr18:8164064-8164299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
171-460
               

               
Cow position:
               
chr18:29388188-29387906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
242, 35
               

               
Conread position:
               
190-357
               

               
Cow position:
               
chr18:18815720-18815890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 162
               

               
Conread position:
               
190-462
               

               
Cow position:
               
chr18:22092730-22092458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 127
               

               
Conread position:
               
191-462
               

               
Cow position:
               
chr18:24342568-24342302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr18:37702910-37703108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr18:56145629-56145414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
199-413
               

               
Cow position:
               
chr18:43564172-43563964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
200-452
               

               
Cow position:
               
chr18:36445382-36445119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
202-448
               

               
Cow position:
               
chr18:26586715-26586974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
7, 149
               

               
Conread position:
               
205-347
               

               
Cow position:
               
chr18:54056496-54056358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
205-462
               

               
Cow position:
               
chr18:13172584-13172848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
206-460
               

               
Cow position:
               
chr18:6290724-6290463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
207-459
               

               
Cow position:
               
chr18:56361665-56361922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
208-342
               

               
Cow position:
               
chr18:35419745-35419611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-413
               

               
Cow position:
               
chr18:35827476-35827678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
212-413
               

               
Cow position:
               
chr18:21768562-21768364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 105
               

               
Conread position:
               
215-458
               

               
Cow position:
               
chr18:3098389-3098631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
14, 109
               

               
Conread position:
               
217-413
               

               
Cow position:
               
chr18:9818764-9818573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
224-462
               

               
Cow position:
               
chr18:37733962-37733715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
236-462
               

               
Cow position:
               
chr18:36224679-36224458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
250-413
               

               
Cow position:
               
chr18:3422614-3422457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
252-413
               

               
Cow position:
               
chr18:56163478-56163324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
254-460
               

               
Cow position:
               
chr18:11811865-11811656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
160, 70
               

               
Conread position:
               
257-423
               

               
Cow position:
               
chr18:20797985-20797827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
257-462
               

               
Cow position:
               
chr18:11671699-11671487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
150, 90
               
Show alignments to all cow chromosomes.