Cow genome map

Conread name: rpigcf0_001345.y1

Conread position: 1-459
Cow position: chr20:32847555-32847107 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 152

Conread position: 2-142
Cow position: chr20:37717934-37717790 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 49, 107

Conread position: 2-346
Cow position: chr20:22485074-22484732 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 159

Conread position: 2-460
Cow position: chr20:20203427-20202970 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 54

Conread position: 4-264
Cow position: chr20:23548967-23548700 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 80

Conread position: 4-413
Cow position: chr20:381923-382315 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 126

Conread position: 4-439
Cow position: chr20:14572167-14572571 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 57

Conread position: 5-122
Cow position: chr20:23506146-23506024 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 5-130
Cow position: chr20:38061564-38061685 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 5-153
Cow position: chr20:31845079-31845227 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-161
Cow position: chr20:14755634-14755788 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 5-225
Cow position: chr20:5702931-5702716 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 149

Conread position: 5-271
Cow position: chr20:20898380-20898643 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 157

Conread position: 5-272
Cow position: chr20:35201622-35201902 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 226

Conread position: 5-283
Cow position: chr20:22937107-22937376 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 118

Conread position: 5-285
Cow position: chr20:7624050-7624313 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 5-290
Cow position: chr20:11008382-11008099 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 145

Conread position: 5-292
Cow position: chr20:11135543-11135830 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 41, 151

Conread position: 5-316
Cow position: chr20:34786733-34787041 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 144

Conread position: 5-356
Cow position: chr20:7438648-7438992 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 42

Conread position: 5-395
Cow position: chr20:3255243-3254878 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 140

Conread position: 5-411
Cow position: chr20:7441930-7442310 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 5-413
Cow position: chr20:4206169-4205775 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 46

Conread position: 5-413
Cow position: chr20:8556061-8556462 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 151

Conread position: 5-413
Cow position: chr20:11043272-11043684 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 286
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 177, 11

Conread position: 5-413
Cow position: chr20:14759465-14759852 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 44

Conread position: 5-413
Cow position: chr20:14879995-14879599 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 139

Conread position: 5-413
Cow position: chr20:29845264-29844867 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 79

Conread position: 5-462
Cow position: chr20:5950431-5950877 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 156

Conread position: 5-462
Cow position: chr20:19237280-19236842 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 38

Conread position: 6-114
Cow position: chr20:21169561-21169665 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 6-116
Cow position: chr20:18423885-18423775 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 6-126
Cow position: chr20:23358286-23358409 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 113

Conread position: 6-135
Cow position: chr20:19955565-19955689 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 6-137
Cow position: chr20:4789653-4789777 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 6-137
Cow position: chr20:22012600-22012470 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 63

Conread position: 6-138
Cow position: chr20:11499211-11499081 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 6-139
Cow position: chr20:16977629-16977772 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 6-139
Cow position: chr20:24491819-24491956 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 61

Conread position: 6-141
Cow position: chr20:8245928-8245792 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 102

Conread position: 6-142
Cow position: chr20:34881190-34881326 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 123

Conread position: 6-143
Cow position: chr20:32555491-32555358 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 6-147
Cow position: chr20:34848111-34847970 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-151
Cow position: chr20:5078485-5078332 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 16

Conread position: 6-151
Cow position: chr20:16291899-16291748 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 6-152
Cow position: chr20:4931287-4931145 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 90

Conread position: 6-153
Cow position: chr20:19201742-19201589 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 6-153
Cow position: chr20:25464838-25464987 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 6-153
Cow position: chr20:37273201-37273056 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 6-156
Cow position: chr20:19746179-19746026 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 6-163
Cow position: chr20:20590096-20590251 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 133
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 147, 0

Conread position: 6-165
Cow position: chr20:26905870-26905723 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 6-168
Cow position: chr20:19834623-19834785 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 33, 149

Conread position: 6-173
Cow position: chr20:27315184-27315022 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 57

Conread position: 6-177
Cow position: chr20:21325533-21325362 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 151

Conread position: 6-178
Cow position: chr20:19635971-19636141 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 142
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 147, 0

Conread position: 6-178
Cow position: chr20:37609831-37609657 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 109

Conread position: 6-185
Cow position: chr20:36312304-36312480 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 24, 0

Conread position: 6-185
Cow position: chr20:39268875-39269057 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 38, 66

Conread position: 6-189
Cow position: chr20:4891910-4892095 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 151

Conread position: 6-193
Cow position: chr20:3564361-3564180 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 112, 0

Conread position: 6-194
Cow position: chr20:5365137-5364949 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 142

Conread position: 6-194
Cow position: chr20:25021639-25021447 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 108

Conread position: 6-195
Cow position: chr20:14490451-14490269 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 0

Conread position: 6-195
Cow position: chr20:35444895-35445085 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 48, 150

Conread position: 6-196
Cow position: chr20:1824423-1824613 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 6-196
Cow position: chr20:15766320-15766128 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 136

Conread position: 6-197
Cow position: chr20:2742926-2743121 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 144

Conread position: 6-198
Cow position: chr20:5703683-5703486 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 145

Conread position: 6-198
Cow position: chr20:10245848-10246038 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 87

Conread position: 6-200
Cow position: chr20:3148889-3148697 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 41, 16

Conread position: 6-200
Cow position: chr20:14283131-14282933 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 155

Conread position: 6-203
Cow position: chr20:37919165-37919362 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 67

Conread position: 6-205
Cow position: chr20:24097203-24097009 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 48, 23

Conread position: 6-206
Cow position: chr20:15530071-15529868 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 35, 123

Conread position: 6-210
Cow position: chr20:34083929-34083721 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 6-212
Cow position: chr20:20158339-20158136 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 200, 45

Conread position: 6-230
Cow position: chr20:18831672-18831887 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 134

Conread position: 6-242
Cow position: chr20:12126093-12126328 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 144

Conread position: 6-246
Cow position: chr20:6248390-6248631 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 43, 144

Conread position: 6-246
Cow position: chr20:25351218-25351435 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 6-258
Cow position: chr20:21428366-21428120 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 81

Conread position: 6-264
Cow position: chr20:39016661-39016922 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 202

Conread position: 6-277
Cow position: chr20:16818629-16818357 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 85

Conread position: 6-283
Cow position: chr20:354690-354961 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 140

Conread position: 6-283
Cow position: chr20:11548520-11548786 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 6-283
Cow position: chr20:35192968-35192713 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 6-285
Cow position: chr20:11751862-11751581 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 43, 96

Conread position: 6-289
Cow position: chr20:38090124-38089841 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 153

Conread position: 6-297
Cow position: chr20:33976697-33976402 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 121

Conread position: 6-301
Cow position: chr20:23540961-23541240 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 37

Conread position: 6-303
Cow position: chr20:36741672-36741391 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 119

Conread position: 6-304
Cow position: chr20:32865991-32866273 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 13

Conread position: 6-314
Cow position: chr20:22265059-22265341 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 6-315
Cow position: chr20:7738026-7738323 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 6-335
Cow position: chr20:4334330-4334639 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 39

Conread position: 6-337
Cow position: chr20:2819756-2819424 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 155

Conread position: 6-346
Cow position: chr20:2298587-2298905 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 49

Conread position: 6-347
Cow position: chr20:38847019-38847364 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 162

Conread position: 6-347
Cow position: chr20:41089584-41089919 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 140

Conread position: 6-351
Cow position: chr20:33067151-33067507 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 73

Conread position: 6-362
Cow position: chr20:14433212-14433575 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 6-373
Cow position: chr20:34221690-34221326 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 80

Conread position: 6-374
Cow position: chr20:28441526-28441177 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 6-392
Cow position: chr20:5814777-5814401 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 135

Conread position: 6-399
Cow position: chr20:2204478-2204839 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 268
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 85

Conread position: 6-409
Cow position: chr20:12239478-12239864 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 122

Conread position: 6-409
Cow position: chr20:35741979-35741569 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 284
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 45, 155

Conread position: 6-412
Cow position: chr20:12420411-12420808 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 6-412
Cow position: chr20:14807091-14806699 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 55

Conread position: 6-412
Cow position: chr20:15548681-15549084 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 157

Conread position: 6-413
Cow position: chr20:8702722-8703095 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 6-413
Cow position: chr20:10209015-10208614 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 88

Conread position: 6-413
Cow position: chr20:13829471-13829076 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 283
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 127

Conread position: 6-413
Cow position: chr20:22235507-22235127 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 32

Conread position: 6-413
Cow position: chr20:25009425-25009831 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 149

Conread position: 6-413
Cow position: chr20:30817729-30817349 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 99

Conread position: 6-413
Cow position: chr20:32083891-32084272 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 6-413
Cow position: chr20:34097740-34098146 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 6-413
Cow position: chr20:38818197-38817822 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 6-415
Cow position: chr20:3141784-3141392 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 68

Conread position: 6-423
Cow position: chr20:23846457-23846870 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 6-432
Cow position: chr20:34596896-34597316 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 282
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 342, 44

Conread position: 6-451
Cow position: chr20:7550442-7550018 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 298
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 47

Conread position: 6-452
Cow position: chr20:6054299-6054750 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 13

Conread position: 6-453
Cow position: chr20:10200557-10200102 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 144

Conread position: 6-454
Cow position: chr20:39398690-39398258 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 141

Conread position: 6-458
Cow position: chr20:4945042-4945489 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 6-459
Cow position: chr20:20984205-20983780 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 314
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 48, 157

Conread position: 6-459
Cow position: chr20:40422890-40423335 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 136

Conread position: 6-460
Cow position: chr20:398104-398539 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 45

Conread position: 6-460
Cow position: chr20:3599191-3599638 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 132

Conread position: 6-460
Cow position: chr20:6240312-6240775 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 107

Conread position: 6-460
Cow position: chr20:7425990-7426436 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 140

Conread position: 6-460
Cow position: chr20:7659018-7659455 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 45

Conread position: 6-460
Cow position: chr20:9433790-9433356 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 49

Conread position: 6-460
Cow position: chr20:12581748-12582193 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 6-460
Cow position: chr20:13752423-13752000 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 44

Conread position: 6-460
Cow position: chr20:24070013-24069569 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 70

Conread position: 6-460
Cow position: chr20:28605414-28604968 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 129

Conread position: 6-460
Cow position: chr20:33169664-33170117 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 190, 37

Conread position: 6-460
Cow position: chr20:35146222-35145761 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 39

Conread position: 6-460
Cow position: chr20:40177452-40177006 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 143

Conread position: 6-462
Cow position: chr20:13876500-13876956 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 122

Conread position: 6-462
Cow position: chr20:17251927-17251463 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 143

Conread position: 6-462
Cow position: chr20:22959137-22959593 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 102

Conread position: 6-462
Cow position: chr20:33434951-33435410 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 24

Conread position: 6-462
Cow position: chr20:35888551-35889014 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 306
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 82

Conread position: 7-125
Cow position: chr20:12033416-12033535 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 117

Conread position: 7-195
Cow position: chr20:30744512-30744703 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 153

Conread position: 7-263
Cow position: chr20:1293821-1294075 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 94

Conread position: 7-321
Cow position: chr20:11611888-11611578 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 82

Conread position: 7-327
Cow position: chr20:10188482-10188166 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 75

Conread position: 7-333
Cow position: chr20:31289713-31289383 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 95, 8

Conread position: 7-346
Cow position: chr20:32523670-32523337 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 42, 88

Conread position: 7-347
Cow position: chr20:25161924-25162257 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 7-371
Cow position: chr20:29990238-29990587 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 117

Conread position: 7-403
Cow position: chr20:27407687-27408056 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 91

Conread position: 7-413
Cow position: chr20:6424161-6423776 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 77, 44

Conread position: 7-459
Cow position: chr20:22065268-22064828 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 54

Conread position: 7-460
Cow position: chr20:31746429-31746869 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 153

Conread position: 7-462
Cow position: chr20:39417695-39418140 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 315
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 47, 141

Conread position: 8-172
Cow position: chr20:630730-630566 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 146

Conread position: 8-174
Cow position: chr20:26040891-26041059 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 149

Conread position: 8-194
Cow position: chr20:33623354-33623533 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 8-258
Cow position: chr20:20934528-20934774 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 155

Conread position: 8-318
Cow position: chr20:18379583-18379282 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 99

Conread position: 8-411
Cow position: chr20:26996740-26996344 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 93

Conread position: 8-413
Cow position: chr20:28982904-28982509 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 114

Conread position: 8-445
Cow position: chr20:31740010-31740446 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 152

Conread position: 8-448
Cow position: chr20:1640261-1640681 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 43

Conread position: 8-459
Cow position: chr20:8578457-8578001 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 8-460
Cow position: chr20:23792800-23792358 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 41

Conread position: 9-133
Cow position: chr20:11822683-11822556 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 63

Conread position: 9-139
Cow position: chr20:26387665-26387533 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 9-153
Cow position: chr20:38934861-38934997 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 9-181
Cow position: chr20:24314830-24315001 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 94

Conread position: 9-460
Cow position: chr20:6257871-6258309 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 39

Conread position: 10-151
Cow position: chr20:34467748-34467889 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 132

Conread position: 10-233
Cow position: chr20:36239454-36239226 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 82

Conread position: 10-239
Cow position: chr20:14620102-14620330 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 41

Conread position: 10-273
Cow position: chr20:9376666-9376414 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 10-297
Cow position: chr20:32709237-32709528 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 152

Conread position: 10-298
Cow position: chr20:16548068-16548356 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 143

Conread position: 10-309
Cow position: chr20:12205533-12205822 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 190, 116

Conread position: 10-321
Cow position: chr20:24712048-24711732 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 138

Conread position: 10-333
Cow position: chr20:11188610-11188920 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 277, 27

Conread position: 10-335
Cow position: chr20:8547268-8546949 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 109

Conread position: 10-378
Cow position: chr20:30710430-30710803 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 201

Conread position: 10-411
Cow position: chr20:21929106-21928719 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 145

Conread position: 10-413
Cow position: chr20:1139561-1139961 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 114

Conread position: 10-413
Cow position: chr20:6603237-6602853 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 10-436
Cow position: chr20:13652166-13652566 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 145

Conread position: 10-446
Cow position: chr20:11340599-11341037 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 80

Conread position: 10-462
Cow position: chr20:8429947-8429500 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 77

Conread position: 10-462
Cow position: chr20:20967522-20967109 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 0

Conread position: 11-409
Cow position: chr20:14980304-14980698 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 64

Conread position: 11-411
Cow position: chr20:38578565-38578943 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 11-413
Cow position: chr20:5998454-5998852 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 160

Conread position: 11-413
Cow position: chr20:20739088-20739477 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 13

Conread position: 11-432
Cow position: chr20:28296501-28296082 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 153

Conread position: 11-460
Cow position: chr20:21019768-21019319 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 12-160
Cow position: chr20:16760033-16760177 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 12-165
Cow position: chr20:13805518-13805364 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 37

Conread position: 12-246
Cow position: chr20:19060638-19060867 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 118

Conread position: 12-258
Cow position: chr20:11359432-11359669 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 143

Conread position: 12-337
Cow position: chr20:32463323-32463640 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 136

Conread position: 12-398
Cow position: chr20:16935114-16935476 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 116

Conread position: 12-456
Cow position: chr20:13269816-13269383 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 106

Conread position: 14-138
Cow position: chr20:3513004-3512883 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 16-153
Cow position: chr20:11444269-11444136 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 16-252
Cow position: chr20:7709586-7709819 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 8

Conread position: 16-421
Cow position: chr20:9537326-9536938 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 9

Conread position: 16-460
Cow position: chr20:21714962-21714506 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 9

Conread position: 18-153
Cow position: chr20:7155373-7155239 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 100

Conread position: 18-452
Cow position: chr20:39743501-39743076 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 305
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 180, 41

Conread position: 19-292
Cow position: chr20:17100553-17100287 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 19-341
Cow position: chr20:40692260-40691934 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 24, 142

Conread position: 19-460
Cow position: chr20:7756434-7756873 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 14

Conread position: 22-153
Cow position: chr20:2316236-2316367 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 22-386
Cow position: chr20:13025427-13025769 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 104, 34

Conread position: 24-151
Cow position: chr20:19090953-19091081 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 25-462
Cow position: chr20:747127-746712 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 302
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 10

Conread position: 29-140
Cow position: chr20:37358038-37357927 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 29-292
Cow position: chr20:30888216-30887960 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 94, 23

Conread position: 29-432
Cow position: chr20:42469941-42469558 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 97

Conread position: 29-452
Cow position: chr20:6903500-6903091 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 128

Conread position: 29-460
Cow position: chr20:11550551-11550120 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 105

Conread position: 29-460
Cow position: chr20:19751489-19751065 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 115

Conread position: 30-189
Cow position: chr20:37090811-37090646 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 128

Conread position: 31-194
Cow position: chr20:34202815-34202653 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 150, 124

Conread position: 31-406
Cow position: chr20:38551544-38551193 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 37

Conread position: 32-344
Cow position: chr20:4332311-4332012 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 5

Conread position: 32-413
Cow position: chr20:10838031-10838409 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 92

Conread position: 32-460
Cow position: chr20:19363184-19363608 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 54

Conread position: 34-373
Cow position: chr20:42197490-42197179 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 123, 0

Conread position: 35-264
Cow position: chr20:10772383-10772158 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 85

Conread position: 35-303
Cow position: chr20:5644963-5644702 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 190, 74

Conread position: 35-374
Cow position: chr20:15568773-15569099 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 252, 109

Conread position: 35-409
Cow position: chr20:33532477-33532127 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 262, 16

Conread position: 37-162
Cow position: chr20:21535558-21535682 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 108

Conread position: 37-317
Cow position: chr20:15118449-15118177 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 31, 42

Conread position: 37-411
Cow position: chr20:17846134-17845773 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 108

Conread position: 37-460
Cow position: chr20:26077255-26076842 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 288
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 160, 18

Conread position: 38-146
Cow position: chr20:36023227-36023335 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 38-153
Cow position: chr20:3781031-3781147 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 38-200
Cow position: chr20:23678542-23678705 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 105

Conread position: 38-217
Cow position: chr20:35591476-35591650 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 38-243
Cow position: chr20:26723508-26723699 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 38-246
Cow position: chr20:21815734-21815533 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 115, 0

Conread position: 38-286
Cow position: chr20:16941115-16941357 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 38-287
Cow position: chr20:22030490-22030252 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 38-293
Cow position: chr20:20056313-20056559 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 38-296
Cow position: chr20:10996282-10996031 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 48

Conread position: 38-307
Cow position: chr20:41883901-41883647 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 189, 33

Conread position: 38-310
Cow position: chr20:13983528-13983271 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 25

Conread position: 38-318
Cow position: chr20:23286163-23286423 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 38-324
Cow position: chr20:35727757-35728063 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 156, 117

Conread position: 38-333
Cow position: chr20:20099428-20099708 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 197, 22

Conread position: 38-333
Cow position: chr20:33438807-33439087 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 225, 131

Conread position: 38-339
Cow position: chr20:7363136-7362848 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 97

Conread position: 38-343
Cow position: chr20:36633985-36633692 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 250, 90

Conread position: 38-346
Cow position: chr20:21761946-21761648 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 38-346
Cow position: chr20:32583491-32583182 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 203
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 107

Conread position: 38-347
Cow position: chr20:32988657-32988966 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 9, 64

Conread position: 38-374
Cow position: chr20:2169550-2169857 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 9

Conread position: 38-399
Cow position: chr20:23064662-23065003 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 0

Conread position: 38-412
Cow position: chr20:39325564-39325198 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 48

Conread position: 38-413
Cow position: chr20:15565656-15566019 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 75

Conread position: 38-413
Cow position: chr20:21372481-21372128 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 117, 0

Conread position: 38-432
Cow position: chr20:35365215-35364844 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 203, 41

Conread position: 38-460
Cow position: chr20:12995834-12996255 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 8

Conread position: 38-460
Cow position: chr20:19328561-19328154 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 303
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 40

Conread position: 38-460
Cow position: chr20:31799030-31799440 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 277
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 199, 117

Conread position: 38-462
Cow position: chr20:20352740-20353162 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 125, 47

Conread position: 38-462
Cow position: chr20:39728624-39728203 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 65

Conread position: 39-183
Cow position: chr20:7416995-7417137 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 39-374
Cow position: chr20:36010967-36010640 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 46

Conread position: 39-392
Cow position: chr20:14100263-14100605 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 245, 105

Conread position: 39-412
Cow position: chr20:38768293-38768640 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 39-413
Cow position: chr20:5827112-5826749 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 39-460
Cow position: chr20:39415922-39415507 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 282
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 139, 105

Conread position: 40-153
Cow position: chr20:20312339-20312452 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 40-189
Cow position: chr20:39155585-39155439 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 74

Conread position: 40-198
Cow position: chr20:40158071-40157915 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 115, 0

Conread position: 40-260
Cow position: chr20:1524320-1524541 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 120

Conread position: 40-388
Cow position: chr20:271252-271586 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 229
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 46

Conread position: 40-408
Cow position: chr20:10818070-10818408 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 40-413
Cow position: chr20:21345604-21345218 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 159

Conread position: 41-135
Cow position: chr20:27340485-27340391 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 41-147
Cow position: chr20:15515270-15515376 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 41-276
Cow position: chr20:38514948-38514724 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 41-304
Cow position: chr20:18392101-18392347 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 247, 101

Conread position: 41-348
Cow position: chr20:22978497-22978192 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 112

Conread position: 41-374
Cow position: chr20:20242253-20241951 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 125, 10

Conread position: 41-413
Cow position: chr20:23870649-23871004 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 41-439
Cow position: chr20:41028659-41028266 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 32, 45

Conread position: 41-460
Cow position: chr20:9412658-9412250 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 112

Conread position: 42-407
Cow position: chr20:42458687-42459034 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 201, 99

Conread position: 42-413
Cow position: chr20:35906881-35907235 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 94, 103

Conread position: 43-174
Cow position: chr20:15846923-15846794 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 43-325
Cow position: chr20:19616660-19616379 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 43

Conread position: 43-374
Cow position: chr20:15312837-15312510 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 43

Conread position: 43-395
Cow position: chr20:3320976-3321308 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 43-413
Cow position: chr20:34777348-34776998 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 101

Conread position: 43-460
Cow position: chr20:36779560-36779976 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 113

Conread position: 44-142
Cow position: chr20:2460499-2460595 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 44-292
Cow position: chr20:5078794-5078550 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 44-303
Cow position: chr20:8619984-8620235 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 156, 7

Conread position: 44-304
Cow position: chr20:38868801-38868559 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 43

Conread position: 44-411
Cow position: chr20:29805492-29805847 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 44-413
Cow position: chr20:11542114-11542471 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 117

Conread position: 44-432
Cow position: chr20:580753-581128 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 45-374
Cow position: chr20:5636647-5636331 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 110

Conread position: 45-413
Cow position: chr20:39518172-39517823 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 46-180
Cow position: chr20:34372539-34372669 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 46-198
Cow position: chr20:8912334-8912484 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 131
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 126, 15

Conread position: 46-277
Cow position: chr20:39962740-39962517 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 47

Conread position: 47-421
Cow position: chr20:31323952-31323601 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 86

Conread position: 47-444
Cow position: chr20:20359617-20360001 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 257
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 94

Conread position: 48-210
Cow position: chr20:11392942-11392782 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 107

Conread position: 48-460
Cow position: chr20:6096332-6096731 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 365, 107

Conread position: 51-160
Cow position: chr20:26930369-26930262 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 51-267
Cow position: chr20:4786858-4787062 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 51-337
Cow position: chr20:32661726-32662018 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 41

Conread position: 51-354
Cow position: chr20:26077508-26077800 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 253, 102

Conread position: 51-412
Cow position: chr20:11481975-11482326 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 35

Conread position: 51-413
Cow position: chr20:28067264-28067614 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 30

Conread position: 51-413
Cow position: chr20:36207974-36207614 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 102

Conread position: 51-458
Cow position: chr20:19459505-19459891 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 102

Conread position: 51-462
Cow position: chr20:33144393-33144801 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 90

Conread position: 52-293
Cow position: chr20:16492232-16491996 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 235, 102

Conread position: 52-373
Cow position: chr20:40450182-40449859 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 104

Conread position: 53-264
Cow position: chr20:24902135-24902344 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 154, 102

Conread position: 53-413
Cow position: chr20:15593441-15593108 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 53-413
Cow position: chr20:40511598-40511946 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 102

Conread position: 53-413
Cow position: chr20:41627183-41627533 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 101, 15

Conread position: 55-285
Cow position: chr20:21204510-21204293 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 57

Conread position: 55-337
Cow position: chr20:1576253-1575980 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 70, 92

Conread position: 55-343
Cow position: chr20:35408007-35407738 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 55-344
Cow position: chr20:31081194-31080919 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 55-411
Cow position: chr20:34108261-34107930 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 55-413
Cow position: chr20:18320638-18320983 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 56-226
Cow position: chr20:32891050-32891213 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 87

Conread position: 57-199
Cow position: chr20:8817337-8817477 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 58-330
Cow position: chr20:39266805-39267071 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 86

Conread position: 61-292
Cow position: chr20:38670900-38670685 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 61-315
Cow position: chr20:35710326-35710075 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 95

Conread position: 63-378
Cow position: chr20:8308164-8307860 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 14

Conread position: 63-393
Cow position: chr20:7211182-7210870 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 63-413
Cow position: chr20:15235900-15235574 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 334, 64

Conread position: 64-255
Cow position: chr20:6358767-6358578 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 0

Conread position: 68-259
Cow position: chr20:22000145-21999957 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 88, 63

Conread position: 68-283
Cow position: chr20:23506326-23506534 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 77

Conread position: 68-420
Cow position: chr20:33363661-33363325 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 68-460
Cow position: chr20:35797752-35797360 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 60

Conread position: 69-348
Cow position: chr20:8262058-8261781 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 13

Conread position: 70-258
Cow position: chr20:39212440-39212621 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 70-339
Cow position: chr20:24834230-24833973 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 70-411
Cow position: chr20:25686207-25686538 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 73-346
Cow position: chr20:28955563-28955827 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 212, 71

Conread position: 75-225
Cow position: chr20:1009570-1009713 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 76-263
Cow position: chr20:39613139-39613319 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 81-348
Cow position: chr20:20471913-20471661 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 22

Conread position: 81-421
Cow position: chr20:19266283-19265961 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 82-462
Cow position: chr20:34001261-34001644 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 215, 20

Conread position: 84-460
Cow position: chr20:3606834-3607197 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 44

Conread position: 85-334
Cow position: chr20:13795103-13794873 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 202, 18

Conread position: 86-308
Cow position: chr20:34085193-34084976 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 68

Conread position: 87-413
Cow position: chr20:22313036-22313345 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 90-413
Cow position: chr20:16715513-16715212 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 203, 59

Conread position: 91-331
Cow position: chr20:24000676-24000911 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 67

Conread position: 92-460
Cow position: chr20:13821461-13821828 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 174, 12

Conread position: 93-346
Cow position: chr20:3739886-3740128 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 73

Conread position: 94-452
Cow position: chr20:41120036-41119683 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 309, 211

Conread position: 99-328
Cow position: chr20:23103335-23103111 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 0

Conread position: 102-439
Cow position: chr20:34918380-34918065 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 189, 53

Conread position: 102-460
Cow position: chr20:14012078-14011724 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 282, 67

Conread position: 104-420
Cow position: chr20:3331178-3331489 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 180, 50

Conread position: 108-413
Cow position: chr20:23505931-23505640 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 108-413
Cow position: chr20:40257073-40256782 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 177, 47

Conread position: 110-413
Cow position: chr20:39019797-39019507 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 114-283
Cow position: chr20:7384167-7384337 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 40

Conread position: 119-309
Cow position: chr20:32830331-32830150 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 124-383
Cow position: chr20:282838-283087 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 128-460
Cow position: chr20:13967173-13967505 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 159, 33

Conread position: 128-462
Cow position: chr20:9473528-9473862 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 165, 12

Conread position: 131-420
Cow position: chr20:22704375-22704093 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 135-409
Cow position: chr20:11864057-11864320 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 32

Conread position: 140-451
Cow position: chr20:18185640-18185342 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 273, 46

Conread position: 142-371
Cow position: chr20:39247984-39247763 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 145-394
Cow position: chr20:28832039-28831794 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 145, 56

Conread position: 148-460
Cow position: chr20:24521814-24521505 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 149, 52

Conread position: 150-454
Cow position: chr20:20312684-20312977 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 263, 52

Conread position: 154-418
Cow position: chr20:18618695-18618445 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 156-413
Cow position: chr20:9379463-9379221 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 132, 50

Conread position: 157-403
Cow position: chr20:37272771-37272538 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 138, 39

Conread position: 164-413
Cow position: chr20:3781374-3781614 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 164-432
Cow position: chr20:23936355-23936623 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 120, 42

Conread position: 164-460
Cow position: chr20:27340112-27339817 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 249, 36

Conread position: 167-346
Cow position: chr20:4892766-4892950 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 35

Conread position: 171-413
Cow position: chr20:6848673-6848434 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 45

Conread position: 171-439
Cow position: chr20:24392021-24391766 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 248, 29

Conread position: 172-356
Cow position: chr20:9701527-9701717 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 31

Conread position: 172-413
Cow position: chr20:26469021-26469253 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 30

Conread position: 177-421
Cow position: chr20:37200398-37200156 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 107, 29

Conread position: 180-336
Cow position: chr20:39154824-39154675 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 182-460
Cow position: chr20:19410330-19410611 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 33

Conread position: 184-454
Cow position: chr20:17733738-17734013 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 138

Conread position: 195-389
Cow position: chr20:31077575-31077385 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 11

Conread position: 199-459
Cow position: chr20:14804286-14804016 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 162

Conread position: 201-460
Cow position: chr20:22445619-22445882 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 5, 79

Conread position: 203-460
Cow position: chr20:10235867-10235606 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 12

Conread position: 206-432
Cow position: chr20:14735688-14735469 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 130, 0

Conread position: 206-460
Cow position: chr20:23679135-23679393 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 81, 113

Conread position: 207-460
Cow position: chr20:12334387-12334136 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 117

Conread position: 215-462
Cow position: chr20:10469069-10468826 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 197, 133

Conread position: 217-411
Cow position: chr20:11923241-11923425 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 120

Conread position: 222-440
Cow position: chr20:35760666-35760456 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 224-459
Cow position: chr20:34458034-34458278 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 124

Conread position: 255-460
Cow position: chr20:3502259-3502048 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 158, 56

Conread position: 256-460
Cow position: chr20:5702711-5702502 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 151, 91

Conread position: 260-412
Cow position: chr20:22029901-22029751 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 88

Show alignments to all cow chromosomes.