Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-204 |
| Cow position: | chr11:81347802-81348006 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 67 |
| Conread position: | 1-207 |
| Cow position: | chr11:37319444-37319654 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 1-208 |
| Cow position: | chr11:40366569-40366780 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 1-208 |
| Cow position: | chr11:42119475-42119272 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 1-208 |
| Cow position: | chr11:76870625-76870820 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 1-210 |
| Cow position: | chr11:106250-106466 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 1-210 |
| Cow position: | chr11:6575326-6575539 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-210 |
| Cow position: | chr11:7662365-7662580 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 1-210 |
| Cow position: | chr11:12167609-12167396 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 53, 115 |
| Conread position: | 1-210 |
| Cow position: | chr11:14134901-14135114 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 1-210 |
| Cow position: | chr11:26305358-26305150 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 1-210 |
| Cow position: | chr11:30766885-30766675 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 1-210 |
| Cow position: | chr11:50649272-50649058 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 1-210 |
| Cow position: | chr11:77161162-77161371 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr11:77178355-77178567 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 1-216 |
| Cow position: | chr11:30216332-30216117 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 1-219 |
| Cow position: | chr11:76599895-76599673 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-233 |
| Cow position: | chr11:64813985-64814221 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 1-445 |
| Cow position: | chr11:7050947-7051409 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 67 |
| Conread position: | 1-486 |
| Cow position: | chr11:7044663-7045152 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 67 |
| Conread position: | 2-210 |
| Cow position: | chr11:37334770-37334976 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 3-210 |
| Cow position: | chr11:14353409-14353204 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 3-224 |
| Cow position: | chr11:5441218-5440994 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 3-234 |
| Cow position: | chr11:70888289-70888051 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 22, 27 |
| Conread position: | 5-452 |
| Cow position: | chr11:72093019-72092563 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 10-221 |
| Cow position: | chr11:79807684-79807900 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 94 |
| Conread position: | 21-210 |
| Cow position: | chr11:14673928-14673741 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 28-208 |
| Cow position: | chr11:76871388-76871203 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 29-204 |
| Cow position: | chr11:20991093-20990914 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 40-210 |
| Cow position: | chr11:2546089-2546265 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 111-486 |
| Cow position: | chr11:8515982-8516364 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 70 |
| Conread position: | 199-342 |
| Cow position: | chr11:66889927-66890070 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-486 |
| Cow position: | chr11:9740433-9740707 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 176 |
| Conread position: | 208-486 |
| Cow position: | chr11:49603812-49603549 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 180, 96 |
| Conread position: | 230-452 |
| Cow position: | chr11:39998950-39999174 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 66, 153 |
Show alignments to all cow chromosomes.