Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-206 |
| Cow position: | chr12:15131745-15131955 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 1-206 |
| Cow position: | chr12:30531752-30531958 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 1-206 |
| Cow position: | chr12:41777840-41778044 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 1-208 |
| Cow position: | chr12:11213131-11213340 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 82, 95 |
| Conread position: | 1-209 |
| Cow position: | chr12:5982356-5982150 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 1-210 |
| Cow position: | chr12:15072904-15072700 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-210 |
| Cow position: | chr12:16352492-16352274 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 1-210 |
| Cow position: | chr12:16908787-16908580 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 1-210 |
| Cow position: | chr12:31871080-31870867 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr12:36069290-36069079 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 52, 40 |
| Conread position: | 1-210 |
| Cow position: | chr12:42941061-42940850 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-219 |
| Cow position: | chr12:13634701-13634913 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 1-219 |
| Cow position: | chr12:16081842-16081621 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 1-224 |
| Cow position: | chr12:39115171-39114950 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 139, 40 |
| Conread position: | 1-243 |
| Cow position: | chr12:26292697-26292450 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 1-448 |
| Cow position: | chr12:4540313-4539868 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 1-469 |
| Cow position: | chr12:39937340-39937806 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 317 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 61, 101 |
| Conread position: | 1-482 |
| Cow position: | chr12:39551785-39552276 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 185 |
| Conread position: | 1-486 |
| Cow position: | chr12:21676825-21676335 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 2-367 |
| Cow position: | chr12:26214000-26213627 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 52, 6 |
| Conread position: | 3-210 |
| Cow position: | chr12:4146279-4146072 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 3-210 |
| Cow position: | chr12:34597910-34597706 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 42 |
| Conread position: | 3-219 |
| Cow position: | chr12:20225534-20225745 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 3-220 |
| Cow position: | chr12:31608813-31608589 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 3-221 |
| Cow position: | chr12:39177680-39177469 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 3-482 |
| Cow position: | chr12:40548984-40549472 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 188 |
| Conread position: | 3-483 |
| Cow position: | chr12:34465234-34464749 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 56, 122 |
| Conread position: | 14-207 |
| Cow position: | chr12:45703957-45703763 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 17-224 |
| Cow position: | chr12:26174408-26174613 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 24 |
| Conread position: | 53-189 |
| Cow position: | chr12:34395553-34395686 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 69-208 |
| Cow position: | chr12:35638800-35638941 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 199-452 |
| Cow position: | chr12:16893900-16893658 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 119, 173 |
| Conread position: | 304-486 |
| Cow position: | chr12:14354741-14354559 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 138, 82 |
Show alignments to all cow chromosomes.