Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-178 |
| Cow position: | chr13:56227564-56227380 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 1-198 |
| Cow position: | chr13:19327950-19328151 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr13:20268122-20267906 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 35 |
| Conread position: | 1-210 |
| Cow position: | chr13:26367063-26367277 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 1-210 |
| Cow position: | chr13:31437488-31437276 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-210 |
| Cow position: | chr13:44433792-44434001 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 1-210 |
| Cow position: | chr13:56231906-56231696 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 1-220 |
| Cow position: | chr13:53826839-53826617 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 1-253 |
| Cow position: | chr13:55952774-55953030 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 1-349 |
| Cow position: | chr13:43712484-43712130 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 177 |
| Conread position: | 2-210 |
| Cow position: | chr13:8643850-8644064 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 2-240 |
| Cow position: | chr13:14610758-14611001 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 2-385 |
| Cow position: | chr13:36322865-36323249 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 101 |
| Conread position: | 3-208 |
| Cow position: | chr13:25343159-25342952 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 3-210 |
| Cow position: | chr13:15853482-15853687 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 3-210 |
| Cow position: | chr13:17935670-17935457 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-210 |
| Cow position: | chr13:20630675-20630468 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 4-307 |
| Cow position: | chr13:2772516-2772207 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 182 |
| Conread position: | 5-210 |
| Cow position: | chr13:6333844-6333643 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 83, 60 |
| Conread position: | 94-410 |
| Cow position: | chr13:52402897-52402583 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 95-210 |
| Cow position: | chr13:22944961-22945077 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 205-486 |
| Cow position: | chr13:50193561-50193828 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 227-485 |
| Cow position: | chr13:55384117-55384372 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 172, 102 |
| Conread position: | 361-486 |
| Cow position: | chr13:43712096-43711972 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 93, 60 |
Show alignments to all cow chromosomes.