Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-173 |
| Cow position: | chr15:35449515-35449692 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 1-184 |
| Cow position: | chr15:14418285-14418105 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 1-185 |
| Cow position: | chr15:8949013-8949199 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 1-208 |
| Cow position: | chr15:50442163-50441952 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 1-209 |
| Cow position: | chr15:49130210-49130407 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 1-210 |
| Cow position: | chr15:6447250-6447466 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 1-210 |
| Cow position: | chr15:8439537-8439750 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 1-210 |
| Cow position: | chr15:17189775-17189986 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 1-210 |
| Cow position: | chr15:25466303-25466092 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 1-210 |
| Cow position: | chr15:32659994-32660198 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr15:42551630-42551417 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 1-210 |
| Cow position: | chr15:42659965-42659751 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 1-210 |
| Cow position: | chr15:44997863-44998077 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr15:45509617-45509829 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 1-219 |
| Cow position: | chr15:22548276-22548061 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 143, 40 |
| Conread position: | 1-224 |
| Cow position: | chr15:18675641-18675867 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-230 |
| Cow position: | chr15:50547809-50547568 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 40, 187 |
| Conread position: | 1-238 |
| Cow position: | chr15:19728801-19729037 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 1-335 |
| Cow position: | chr15:1304505-1304172 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 1-362 |
| Cow position: | chr15:33611701-33612086 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 161 |
| Conread position: | 1-482 |
| Cow position: | chr15:20128674-20129167 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 185 |
| Conread position: | 2-206 |
| Cow position: | chr15:45696385-45696594 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-210 |
| Cow position: | chr15:16431948-16431738 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 39 |
| Conread position: | 2-210 |
| Cow position: | chr15:26171081-26170868 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 3-210 |
| Cow position: | chr15:51241183-51241390 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 4-486 |
| Cow position: | chr15:6309488-6308996 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 4-486 |
| Cow position: | chr15:32432391-32432880 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 6-210 |
| Cow position: | chr15:18212870-18213075 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 11-210 |
| Cow position: | chr15:17005425-17005225 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 17-452 |
| Cow position: | chr15:37755766-37755315 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 178 |
| Conread position: | 205-451 |
| Cow position: | chr15:22892574-22892339 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 125, 167 |
| Conread position: | 205-486 |
| Cow position: | chr15:13994461-13994191 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 113, 147 |
Show alignments to all cow chromosomes.