Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-198 |
| Cow position: | chr16:14182733-14182539 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 1-199 |
| Cow position: | chr16:33874767-33874970 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-205 |
| Cow position: | chr16:3160046-3160250 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 91, 25 |
| Conread position: | 1-207 |
| Cow position: | chr16:12004663-12004456 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 1-207 |
| Cow position: | chr16:12093005-12092797 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 1-208 |
| Cow position: | chr16:10669473-10669261 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 1-208 |
| Cow position: | chr16:24586795-24587003 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 57, 149 |
| Conread position: | 1-209 |
| Cow position: | chr16:44460444-44460656 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-210 |
| Cow position: | chr16:571421-571218 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 1-210 |
| Cow position: | chr16:11484646-11484854 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:17162846-17162634 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:33435654-33435864 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:37100750-37100957 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:40501782-40501572 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:40522011-40522222 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:43861087-43861302 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:48895797-48896003 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 1-210 |
| Cow position: | chr16:56209792-56209578 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 1-219 |
| Cow position: | chr16:50508036-50508256 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 1-220 |
| Cow position: | chr16:33531413-33531200 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 152, 40 |
| Conread position: | 1-237 |
| Cow position: | chr16:33377455-33377228 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-247 |
| Cow position: | chr16:49910855-49911105 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 1-269 |
| Cow position: | chr16:13513366-13513647 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-486 |
| Cow position: | chr16:412205-412690 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 40 |
| Conread position: | 2-183 |
| Cow position: | chr16:16076325-16076502 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 2-210 |
| Cow position: | chr16:16087961-16088165 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 2-452 |
| Cow position: | chr16:45161342-45161803 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 3-207 |
| Cow position: | chr16:10933413-10933201 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-224 |
| Cow position: | chr16:10178986-10178762 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 3-486 |
| Cow position: | chr16:22243801-22243319 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 336 |
| Conread position: | 4-486 |
| Cow position: | chr16:13877796-13878291 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 4-486 |
| Cow position: | chr16:52619321-52619812 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 105 |
| Conread position: | 6-482 |
| Cow position: | chr16:35415444-35415929 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 181 |
| Conread position: | 9-469 |
| Cow position: | chr16:1631896-1631422 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 11-206 |
| Cow position: | chr16:35291231-35291427 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 13-479 |
| Cow position: | chr16:54637270-54636800 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 17-486 |
| Cow position: | chr16:3139826-3140301 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 101 |
| Conread position: | 60-210 |
| Cow position: | chr16:35445902-35446055 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 74-209 |
| Cow position: | chr16:16724780-16724918 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 205-486 |
| Cow position: | chr16:28177762-28178029 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 163 |
| Conread position: | 205-486 |
| Cow position: | chr16:40413897-40413627 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 113, 55 |
| Conread position: | 238-486 |
| Cow position: | chr16:5651035-5650787 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 59 |
| Conread position: | 258-482 |
| Cow position: | chr16:23846879-23847104 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 54 |
Show alignments to all cow chromosomes.