Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-184 |
| Cow position: | chr3:23846718-23846535 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 1-207 |
| Cow position: | chr3:6190246-6190034 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 1-207 |
| Cow position: | chr3:28500908-28500702 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 1-210 |
| Cow position: | chr3:1839675-1839461 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 1-210 |
| Cow position: | chr3:6049547-6049335 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-210 |
| Cow position: | chr3:10687996-10688210 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 1-210 |
| Cow position: | chr3:41158770-41158560 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 1-210 |
| Cow position: | chr3:65526048-65526256 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 1-210 |
| Cow position: | chr3:82515723-82515934 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 1-218 |
| Cow position: | chr3:83785651-83785879 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-219 |
| Cow position: | chr3:49006213-49005995 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 1-486 |
| Cow position: | chr3:14933213-14932715 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 1-486 |
| Cow position: | chr3:42257309-42256810 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 3-205 |
| Cow position: | chr3:3251503-3251305 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 3-208 |
| Cow position: | chr3:28692193-28692395 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 3-210 |
| Cow position: | chr3:48091148-48091350 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 3-210 |
| Cow position: | chr3:59205509-59205298 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 3-210 |
| Cow position: | chr3:82508320-82508532 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 3-225 |
| Cow position: | chr3:49850045-49850269 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 4-162 |
| Cow position: | chr3:3255245-3255411 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 4-173 |
| Cow position: | chr3:58306893-58306726 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 4-452 |
| Cow position: | chr3:19238844-19239315 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 6-166 |
| Cow position: | chr3:25899207-25899372 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 6-486 |
| Cow position: | chr3:45838884-45838387 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 182 |
| Conread position: | 7-210 |
| Cow position: | chr3:84919244-84919037 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 11-225 |
| Cow position: | chr3:10215651-10215437 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 30 |
| Conread position: | 41-210 |
| Cow position: | chr3:17641912-17642084 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 46-204 |
| Cow position: | chr3:19696458-19696298 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 69-210 |
| Cow position: | chr3:36781556-36781699 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 205-486 |
| Cow position: | chr3:32168111-32167842 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 205-486 |
| Cow position: | chr3:39175174-39174910 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 249, 75 |
| Conread position: | 230-481 |
| Cow position: | chr3:25695045-25694798 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 184, 9 |
| Conread position: | 300-449 |
| Cow position: | chr3:11132157-11132007 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 70, 124 |
Show alignments to all cow chromosomes.