Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-207 |
| Cow position: | chr4:65944497-65944700 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 1-209 |
| Cow position: | chr4:3868763-3868552 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 1-209 |
| Cow position: | chr4:13150518-13150309 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 1-210 |
| Cow position: | chr4:10980133-10980336 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 53, 136 |
| Conread position: | 1-210 |
| Cow position: | chr4:14480198-14480408 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 1-210 |
| Cow position: | chr4:18006136-18006341 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 24 |
| Conread position: | 1-210 |
| Cow position: | chr4:43420622-43420835 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 1-210 |
| Cow position: | chr4:43465617-43465824 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 1-210 |
| Cow position: | chr4:44086139-44085926 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 1-210 |
| Cow position: | chr4:44621842-44621630 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 1-210 |
| Cow position: | chr4:48236123-48235911 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 1-210 |
| Cow position: | chr4:61152235-61152023 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 1-210 |
| Cow position: | chr4:66835902-66835686 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 1-280 |
| Cow position: | chr4:12652083-12652371 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 185 |
| Conread position: | 2-210 |
| Cow position: | chr4:28224014-28223803 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 2-210 |
| Cow position: | chr4:58431655-58431866 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 3-210 |
| Cow position: | chr4:3463957-3463746 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 3-210 |
| Cow position: | chr4:14424139-14424342 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 54, 125 |
| Conread position: | 3-210 |
| Cow position: | chr4:31596647-31596860 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 3-210 |
| Cow position: | chr4:57717095-57717299 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 3-210 |
| Cow position: | chr4:59531766-59531554 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 4-209 |
| Cow position: | chr4:54141964-54142171 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 6-219 |
| Cow position: | chr4:12226837-12226624 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 6-482 |
| Cow position: | chr4:5228739-5229218 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 179 |
| Conread position: | 6-487 |
| Cow position: | chr4:14528314-14528809 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 180 |
| Conread position: | 11-207 |
| Cow position: | chr4:64369572-64369766 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 28-294 |
| Cow position: | chr4:34324347-34324613 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 54-482 |
| Cow position: | chr4:28871427-28871858 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 292 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 162-486 |
| Cow position: | chr4:21869927-21870250 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 199-452 |
| Cow position: | chr4:57717533-57717774 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 205-486 |
| Cow position: | chr4:23122718-23122992 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 238-482 |
| Cow position: | chr4:28610355-28610598 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 218, 148 |
| Conread position: | 238-486 |
| Cow position: | chr4:7140541-7140299 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 80, 139 |
Show alignments to all cow chromosomes.