Cow genome map
| Conread name: | rpigcf0_001412.y1 |
| Conread position: | 1-176 |
| Cow position: | chrX:42467429-42467250 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-202 |
| Cow position: | chrX:25306719-25306516 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 67 |
| Conread position: | 1-208 |
| Cow position: | chrX:39528470-39528681 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 1-209 |
| Cow position: | chrX:47336281-47336069 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 44, 115 |
| Conread position: | 1-210 |
| Cow position: | chrX:29919833-29919617 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 1-210 |
| Cow position: | chrX:32978887-32978671 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 1-211 |
| Cow position: | chrX:36090462-36090676 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-214 |
| Cow position: | chrX:47331690-47331473 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 1-219 |
| Cow position: | chrX:37074996-37074781 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 1-361 |
| Cow position: | chrX:26887742-26888124 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 53, 112 |
| Conread position: | 1-374 |
| Cow position: | chrX:15267291-15266928 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 177 |
| Conread position: | 1-478 |
| Cow position: | chrX:12649124-12649613 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 106 |
| Conread position: | 1-486 |
| Cow position: | chrX:831132-830625 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 195 |
| Conread position: | 1-486 |
| Cow position: | chrX:26463661-26464153 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 279 |
| Conread position: | 1-486 |
| Cow position: | chrX:30035992-30035489 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 384 |
| Conread position: | 1-486 |
| Cow position: | chrX:40598599-40599096 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 192 |
| Conread position: | 1-486 |
| Cow position: | chrX:42570645-42570159 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 57 |
| Conread position: | 2-207 |
| Cow position: | chrX:34827302-34827505 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 67 |
| Conread position: | 3-210 |
| Cow position: | chrX:45893014-45893224 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 3-487 |
| Cow position: | chrX:31203933-31204422 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 4-206 |
| Cow position: | chrX:44117247-44117040 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 4-452 |
| Cow position: | chrX:26411689-26412141 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 4-486 |
| Cow position: | chrX:9515117-9514625 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 187 |
| Conread position: | 4-486 |
| Cow position: | chrX:29149743-29149239 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 186 |
| Conread position: | 7-478 |
| Cow position: | chrX:17791210-17790734 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 50-486 |
| Cow position: | chrX:26803034-26803477 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 199-439 |
| Cow position: | chrX:24394761-24394989 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 114 |
| Conread position: | 205-482 |
| Cow position: | chrX:42417154-42417416 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 249, 108 |
| Conread position: | 207-486 |
| Cow position: | chrX:31859545-31859821 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 5, 60 |
Show alignments to all cow chromosomes.