Cow genome map
| Conread name: | rpigcf0_002377.y1 |
| Conread position: | 169-335 |
| Cow position: | chr12:17967165-17967329 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 169-405 |
| Cow position: | chr12:35345891-35346120 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 170-380 |
| Cow position: | chr12:8676746-8676526 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 175 |
| Conread position: | 170-394 |
| Cow position: | chr12:23161561-23161332 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 38, 159 |
| Conread position: | 170-397 |
| Cow position: | chr12:1776603-1776383 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 170-405 |
| Cow position: | chr12:21943092-21943333 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 171-347 |
| Cow position: | chr12:17980065-17980237 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 171-405 |
| Cow position: | chr12:48471527-48471297 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 172-347 |
| Cow position: | chr12:600014-599845 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 172-364 |
| Cow position: | chr12:1403858-1404049 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 118 |
| Conread position: | 172-399 |
| Cow position: | chr12:42858180-42857950 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 172-401 |
| Cow position: | chr12:11099582-11099812 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 30, 162 |
| Conread position: | 172-401 |
| Cow position: | chr12:14660994-14660764 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-401 |
| Cow position: | chr12:20996730-20996501 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 30, 156 |
| Conread position: | 172-401 |
| Cow position: | chr12:22204357-22204126 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 32, 163 |
| Conread position: | 172-401 |
| Cow position: | chr12:27854607-27854379 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 172-401 |
| Cow position: | chr12:27931553-27931323 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 178-358 |
| Cow position: | chr12:25099713-25099527 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 178-399 |
| Cow position: | chr12:21210025-21210248 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 21, 158 |
| Conread position: | 178-405 |
| Cow position: | chr12:21429370-21429598 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 181-405 |
| Cow position: | chr12:32654921-32655140 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 182-394 |
| Cow position: | chr12:32065118-32065321 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 183-369 |
| Cow position: | chr12:43055127-43054943 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 200-405 |
| Cow position: | chr12:22568370-22568165 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 136 |
| Conread position: | 200-405 |
| Cow position: | chr12:28005270-28005465 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 205-394 |
| Cow position: | chr12:35110203-35110394 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 8 |
| Conread position: | 214-402 |
| Cow position: | chr12:5145073-5145258 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 95 |
Show alignments to all cow chromosomes.