Cow genome map
| Conread name: | rpigcf0_002377.y1 |
| Conread position: | 160-405 |
| Cow position: | chr19:40816070-40815823 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 14, 122 |
| Conread position: | 168-380 |
| Cow position: | chr19:9706721-9706512 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 170-380 |
| Cow position: | chr19:1660123-1660325 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 170-401 |
| Cow position: | chr19:173710-173943 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 32, 168 |
| Conread position: | 170-402 |
| Cow position: | chr19:32181599-32181374 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 170-405 |
| Cow position: | chr19:30756670-30756903 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 88, 58 |
| Conread position: | 170-405 |
| Cow position: | chr19:35384164-35383926 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 164, 114 |
| Conread position: | 171-347 |
| Cow position: | chr19:5249279-5249105 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 171-397 |
| Cow position: | chr19:5027647-5027423 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 16 |
| Conread position: | 171-405 |
| Cow position: | chr19:1587788-1587550 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 59 |
| Conread position: | 172-399 |
| Cow position: | chr19:205961-206190 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 172-399 |
| Cow position: | chr19:892181-891954 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 47 |
| Conread position: | 172-401 |
| Cow position: | chr19:437985-437755 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 172-401 |
| Cow position: | chr19:4387066-4387285 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 172-401 |
| Cow position: | chr19:5730309-5730525 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 172-401 |
| Cow position: | chr19:12774558-12774788 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 38, 163 |
| Conread position: | 172-401 |
| Cow position: | chr19:33943025-33943251 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 172-401 |
| Cow position: | chr19:39184087-39183861 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 71 |
| Conread position: | 173-401 |
| Cow position: | chr19:40851004-40850782 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 175-394 |
| Cow position: | chr19:16128616-16128833 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 178-309 |
| Cow position: | chr19:33527574-33527706 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 178-399 |
| Cow position: | chr19:7343530-7343749 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 178-401 |
| Cow position: | chr19:28580212-28579991 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 178-402 |
| Cow position: | chr19:166668-166443 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 178-405 |
| Cow position: | chr19:20106186-20106414 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 179-405 |
| Cow position: | chr19:40794781-40794560 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 183-405 |
| Cow position: | chr19:32139918-32139696 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 151 |
| Conread position: | 206-405 |
| Cow position: | chr19:48860270-48860075 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 175, 123 |
Show alignments to all cow chromosomes.