Cow genome map

Conread name: rpigcf0_002377.y1

Conread position: 160-377
Cow position: chr2:36993055-36993272 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 18

Conread position: 160-401
Cow position: chr2:281799-281559 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 42, 183

Conread position: 170-380
Cow position: chr2:19012258-19012469 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 32, 166

Conread position: 170-380
Cow position: chr2:49631406-49631610 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 95

Conread position: 170-381
Cow position: chr2:288888-288682 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 20

Conread position: 170-398
Cow position: chr2:53429842-53430074 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 167

Conread position: 170-401
Cow position: chr2:56888633-56888864 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 76

Conread position: 170-401
Cow position: chr2:80291868-80291636 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 164

Conread position: 170-403
Cow position: chr2:36082694-36082930 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 50

Conread position: 170-405
Cow position: chr2:386887-386654 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 14, 44

Conread position: 170-405
Cow position: chr2:11693371-11693606 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 115

Conread position: 170-405
Cow position: chr2:32434426-32434194 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 137

Conread position: 170-405
Cow position: chr2:32458164-32457936 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 89

Conread position: 170-405
Cow position: chr2:43961561-43961790 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 99

Conread position: 170-405
Cow position: chr2:64768297-64768060 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 30, 166

Conread position: 170-405
Cow position: chr2:72187608-72187369 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 105

Conread position: 170-405
Cow position: chr2:72906332-72906084 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 177

Conread position: 171-356
Cow position: chr2:54408724-54408547 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 81

Conread position: 171-394
Cow position: chr2:24471735-24471507 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 171-402
Cow position: chr2:42669809-42669581 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 8

Conread position: 171-405
Cow position: chr2:10731961-10731730 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 207, 53

Conread position: 171-405
Cow position: chr2:34052054-34052294 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 164

Conread position: 171-405
Cow position: chr2:51618156-51618394 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 167

Conread position: 171-405
Cow position: chr2:54693845-54694072 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 131

Conread position: 172-377
Cow position: chr2:56801743-56801553 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 172-394
Cow position: chr2:13044815-13044588 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 159

Conread position: 172-399
Cow position: chr2:52063657-52063884 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 38, 163

Conread position: 172-401
Cow position: chr2:8119442-8119669 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 209, 162

Conread position: 172-401
Cow position: chr2:10185329-10185101 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 30, 86

Conread position: 172-401
Cow position: chr2:10264509-10264283 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 96

Conread position: 172-401
Cow position: chr2:16901154-16901382 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 30, 93

Conread position: 172-401
Cow position: chr2:24925466-24925693 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 93

Conread position: 172-401
Cow position: chr2:25743440-25743665 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 71

Conread position: 172-401
Cow position: chr2:25887652-25887422 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 163

Conread position: 172-401
Cow position: chr2:32065140-32064912 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 87

Conread position: 172-401
Cow position: chr2:65937335-65937101 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 169

Conread position: 172-401
Cow position: chr2:81258076-81258304 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 209, 28

Conread position: 172-402
Cow position: chr2:28794139-28794366 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 209, 78

Conread position: 172-405
Cow position: chr2:12223380-12223147 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 94

Conread position: 172-405
Cow position: chr2:20872588-20872360 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 66

Conread position: 172-405
Cow position: chr2:24926315-24926546 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 93

Conread position: 172-405
Cow position: chr2:45915943-45915709 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 164

Conread position: 173-402
Cow position: chr2:20891926-20891701 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 48

Conread position: 174-397
Cow position: chr2:174665-174443 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 92

Conread position: 174-405
Cow position: chr2:574489-574721 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 85

Conread position: 174-405
Cow position: chr2:6674129-6674355 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 55

Conread position: 174-405
Cow position: chr2:34473700-34473465 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 12, 181

Conread position: 176-398
Cow position: chr2:50078469-50078688 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 159

Conread position: 178-318
Cow position: chr2:41048146-41048006 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 178-347
Cow position: chr2:211386-211219 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 81

Conread position: 178-380
Cow position: chr2:17424762-17424964 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 157

Conread position: 178-399
Cow position: chr2:2411879-2411662 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 59

Conread position: 178-401
Cow position: chr2:11158216-11157994 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 24, 87

Conread position: 178-405
Cow position: chr2:364164-363937 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 157

Conread position: 178-405
Cow position: chr2:12696564-12696338 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 150

Conread position: 178-405
Cow position: chr2:26922330-26922558 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 157

Conread position: 179-393
Cow position: chr2:35356908-35357123 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 86

Conread position: 179-405
Cow position: chr2:31662961-31663190 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 8, 129

Conread position: 181-402
Cow position: chr2:38374687-38374910 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 34

Conread position: 181-405
Cow position: chr2:36029482-36029266 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 68

Conread position: 182-380
Cow position: chr2:13481792-13481601 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 43

Conread position: 183-405
Cow position: chr2:16074624-16074409 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 198, 21

Conread position: 194-405
Cow position: chr2:45967113-45966905 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 154

Conread position: 195-405
Cow position: chr2:39690830-39691034 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 8

Conread position: 200-401
Cow position: chr2:22078829-22079032 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 36

Conread position: 200-401
Cow position: chr2:50982214-50982021 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 181, 66

Conread position: 200-405
Cow position: chr2:14209896-14209692 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 181, 36

Conread position: 211-402
Cow position: chr2:63518911-63519098 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 170, 37

Conread position: 213-394
Cow position: chr2:74858114-74858284 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 174, 17

Conread position: 253-405
Cow position: chr2:81504249-81504399 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 60

Show alignments to all cow chromosomes.