Cow genome map
| Conread name: | rpigcf0_002377.y1 |
| Conread position: | 159-401 |
| Cow position: | chr23:11780122-11780361 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 108 |
| Conread position: | 168-401 |
| Cow position: | chr23:28304268-28304497 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 213, 11 |
| Conread position: | 170-365 |
| Cow position: | chr23:11076830-11076643 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 170-392 |
| Cow position: | chr23:31648677-31648459 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 170-402 |
| Cow position: | chr23:15876215-15875987 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 170-405 |
| Cow position: | chr23:26838170-26838404 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 22, 117 |
| Conread position: | 171-393 |
| Cow position: | chr23:4890041-4890262 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 171-394 |
| Cow position: | chr23:2025728-2025505 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 171-399 |
| Cow position: | chr23:1022605-1022380 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 171-401 |
| Cow position: | chr23:4513834-4514065 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 172-361 |
| Cow position: | chr23:2793905-2793717 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 172-376 |
| Cow position: | chr23:14777606-14777411 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 53 |
| Conread position: | 172-394 |
| Cow position: | chr23:15218529-15218313 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 172-394 |
| Cow position: | chr23:19490907-19491126 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 172-398 |
| Cow position: | chr23:15526929-15527157 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-400 |
| Cow position: | chr23:4639238-4639011 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 209, 60 |
| Conread position: | 172-401 |
| Cow position: | chr23:1957520-1957752 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 165 |
| Conread position: | 172-401 |
| Cow position: | chr23:2759253-2759480 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 172-401 |
| Cow position: | chr23:3879734-3879504 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 172-401 |
| Cow position: | chr23:31164157-31164385 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 172-401 |
| Cow position: | chr23:36030026-36029798 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 172-405 |
| Cow position: | chr23:16497892-16497662 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 173-401 |
| Cow position: | chr23:965141-964913 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 169, 178 |
| Conread position: | 176-405 |
| Cow position: | chr23:2342438-2342664 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 199, 53 |
| Conread position: | 178-380 |
| Cow position: | chr23:19949228-19949027 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr23:17878400-17878175 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 178-405 |
| Cow position: | chr23:38691849-38692077 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 183-401 |
| Cow position: | chr23:20154863-20154645 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 200-405 |
| Cow position: | chr23:32351381-32351176 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 181, 134 |
| Conread position: | 211-373 |
| Cow position: | chr23:26159254-26159098 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 220-399 |
| Cow position: | chr23:6220553-6220728 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 161, 17 |
Show alignments to all cow chromosomes.