Cow genome map
| Conread name: | rpigcf0_002377.y1 |
| Conread position: | 170-339 |
| Cow position: | chr24:35840642-35840476 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 170-357 |
| Cow position: | chr24:25437723-25437905 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 170-405 |
| Cow position: | chr24:9090614-9090382 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 153 |
| Conread position: | 170-405 |
| Cow position: | chr24:14305259-14305481 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 170-405 |
| Cow position: | chr24:14870886-14870659 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 209, 27 |
| Conread position: | 170-405 |
| Cow position: | chr24:38638966-38639194 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 171-377 |
| Cow position: | chr24:36723268-36723466 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 171-405 |
| Cow position: | chr24:12238725-12238960 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 39, 165 |
| Conread position: | 172-345 |
| Cow position: | chr24:40468494-40468662 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 98 |
| Conread position: | 172-377 |
| Cow position: | chr24:12334288-12334084 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 148, 154 |
| Conread position: | 172-398 |
| Cow position: | chr24:12087641-12087869 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 163 |
| Conread position: | 172-399 |
| Cow position: | chr24:16560872-16560649 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 30, 131 |
| Conread position: | 172-401 |
| Cow position: | chr24:6407477-6407704 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 172-401 |
| Cow position: | chr24:8606258-8606492 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-401 |
| Cow position: | chr24:9545497-9545726 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 172-401 |
| Cow position: | chr24:12127672-12127439 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 172-401 |
| Cow position: | chr24:14755440-14755670 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-401 |
| Cow position: | chr24:22972504-22972736 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 30, 165 |
| Conread position: | 172-404 |
| Cow position: | chr24:14389096-14388870 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 178-356 |
| Cow position: | chr24:13233706-13233884 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 157 |
| Conread position: | 178-399 |
| Cow position: | chr24:6023640-6023418 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-399 |
| Cow position: | chr24:19834852-19835076 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 159 |
| Conread position: | 178-399 |
| Cow position: | chr24:29188742-29188956 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 178-401 |
| Cow position: | chr24:147164-146940 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-401 |
| Cow position: | chr24:6036437-6036660 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 87 |
| Conread position: | 178-402 |
| Cow position: | chr24:12699376-12699151 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr24:5991778-5991550 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr24:7062990-7063216 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr24:13044180-13043952 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr24:19702942-19703162 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 58 |
| Conread position: | 178-405 |
| Cow position: | chr24:23504412-23504184 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr24:44018956-44019184 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 179-402 |
| Cow position: | chr24:5776950-5776730 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 183-401 |
| Cow position: | chr24:6130264-6130480 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 20, 120 |
| Conread position: | 207-380 |
| Cow position: | chr24:42586436-42586609 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 211-357 |
| Cow position: | chr24:36558069-36557923 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 144 |
| Conread position: | 215-401 |
| Cow position: | chr24:4414057-4413875 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 166, 52 |
| Conread position: | 221-399 |
| Cow position: | chr24:14383136-14382959 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 160, 69 |
| Conread position: | 244-405 |
| Cow position: | chr24:17958031-17957871 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 58 |
Show alignments to all cow chromosomes.