Cow genome map
Conread name: | rpigcf0_002377.y1 |
Conread position: | 140-394 |
Cow position: | chr4:69521577-69521826 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 176 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 47, 23 |
Conread position: | 160-405 |
Cow position: | chr4:42405685-42405933 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 166 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 50, 10 |
Conread position: | 168-405 |
Cow position: | chr4:6206682-6206922 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 9, 30 |
Conread position: | 170-361 |
Cow position: | chr4:19742840-19742657 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 22, 43 |
Conread position: | 170-361 |
Cow position: | chr4:50975711-50975891 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 147 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 31, 94 |
Conread position: | 170-364 |
Cow position: | chr4:4178332-4178523 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 142 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 18, 97 |
Conread position: | 170-385 |
Cow position: | chr4:6519906-6520104 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 157 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 31, 36 |
Conread position: | 170-394 |
Cow position: | chr4:21359314-21359533 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 31, 79 |
Conread position: | 170-400 |
Cow position: | chr4:12240138-12239911 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 32, 98 |
Conread position: | 170-402 |
Cow position: | chr4:13958259-13958485 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 166 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 31, 78 |
Conread position: | 170-405 |
Cow position: | chr4:34221835-34222058 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 171 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 209, 19 |
Conread position: | 170-405 |
Cow position: | chr4:49716866-49717088 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 163 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 211, 55 |
Conread position: | 171-376 |
Cow position: | chr4:493535-493347 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 30, 83 |
Conread position: | 171-377 |
Cow position: | chr4:47462905-47463109 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 141 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 26, 88 |
Conread position: | 171-403 |
Cow position: | chr4:20604785-20605002 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 171 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 30, 89 |
Conread position: | 171-405 |
Cow position: | chr4:34178152-34177929 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 31, 54 |
Conread position: | 172-356 |
Cow position: | chr4:61693438-61693252 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 131 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 27, 166 |
Conread position: | 172-394 |
Cow position: | chr4:43318551-43318329 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 165 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 38, 103 |
Conread position: | 172-399 |
Cow position: | chr4:356992-357217 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 157 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 122 |
Conread position: | 172-401 |
Cow position: | chr4:3356849-3356619 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 172-401 |
Cow position: | chr4:12588416-12588642 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 30, 91 |
Conread position: | 172-401 |
Cow position: | chr4:13494414-13494646 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 96 |
Conread position: | 172-401 |
Cow position: | chr4:16360994-16361235 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 166 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 86, 174 |
Conread position: | 172-401 |
Cow position: | chr4:16639694-16639924 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 166 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 172-401 |
Cow position: | chr4:17924877-17924647 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 172-401 |
Cow position: | chr4:25598401-25598171 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 167 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 172-401 |
Cow position: | chr4:26876693-26876474 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 164 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 30, 53 |
Conread position: | 172-401 |
Cow position: | chr4:31564199-31563969 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 162 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 172-401 |
Cow position: | chr4:33494639-33494869 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 38, 163 |
Conread position: | 172-401 |
Cow position: | chr4:36897464-36897691 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 167 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 30, 53 |
Conread position: | 172-401 |
Cow position: | chr4:43882194-43882419 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 164 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 27, 102 |
Conread position: | 172-401 |
Cow position: | chr4:44726666-44726892 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 160 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 31, 54 |
Conread position: | 172-401 |
Cow position: | chr4:67682281-67682511 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 30, 163 |
Conread position: | 173-394 |
Cow position: | chr4:20067634-20067420 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 208, 27 |
Conread position: | 173-399 |
Cow position: | chr4:52963047-52962834 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 164 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 34, 76 |
Conread position: | 176-380 |
Cow position: | chr4:14755583-14755382 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 16, 37 |
Conread position: | 176-394 |
Cow position: | chr4:10882642-10882855 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 24, 85 |
Conread position: | 178-380 |
Cow position: | chr4:65665304-65665102 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 25, 157 |
Conread position: | 178-399 |
Cow position: | chr4:1952475-1952255 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 159 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 62, 58 |
Conread position: | 178-399 |
Cow position: | chr4:5443735-5443513 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 24, 157 |
Conread position: | 178-401 |
Cow position: | chr4:99128-98903 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 165 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 24, 158 |
Conread position: | 178-401 |
Cow position: | chr4:57985082-57985306 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 24, 157 |
Conread position: | 178-402 |
Cow position: | chr4:18423426-18423206 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 24, 131 |
Conread position: | 178-405 |
Cow position: | chr4:14386911-14387139 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 163 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 21, 157 |
Conread position: | 178-405 |
Cow position: | chr4:17092772-17092544 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 167 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 24, 157 |
Conread position: | 178-405 |
Cow position: | chr4:17502241-17502013 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 169 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 24, 163 |
Conread position: | 178-405 |
Cow position: | chr4:28653402-28653177 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 24, 157 |
Conread position: | 178-405 |
Cow position: | chr4:41959990-41960218 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 24, 157 |
Conread position: | 179-355 |
Cow position: | chr4:31638833-31638658 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 126 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 92 |
Conread position: | 179-393 |
Cow position: | chr4:60263066-60262859 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 151 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 24, 70 |
Conread position: | 182-402 |
Cow position: | chr4:19252531-19252741 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 18, 30 |
Conread position: | 182-405 |
Cow position: | chr4:19094080-19094296 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 195, 55 |
Conread position: | 193-405 |
Cow position: | chr4:14199274-14199488 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 140 |
Conread position: | 205-399 |
Cow position: | chr4:11813226-11813420 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 133 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 176, 78 |
Conread position: | 207-314 |
Cow position: | chr4:62569501-62569608 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 74, 29 |
Conread position: | 213-405 |
Cow position: | chr4:28832846-28833034 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 134 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 168, 85 |
Conread position: | 215-405 |
Cow position: | chr4:18102530-18102338 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 131 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 218-405 |
Cow position: | chr4:33022505-33022320 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 141 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 163, 34 |
Conread position: | 224-380 |
Cow position: | chr4:33071697-33071542 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 113 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 110, 0 |
Show alignments to all cow chromosomes.