Cow genome map

Conread name: rpigcf0_002377.y1

Conread position: 140-394
Cow position: chr4:69521577-69521826 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 23

Conread position: 160-405
Cow position: chr4:42405685-42405933 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 166
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 10

Conread position: 168-405
Cow position: chr4:6206682-6206922 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 9, 30

Conread position: 170-361
Cow position: chr4:19742840-19742657 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 43

Conread position: 170-361
Cow position: chr4:50975711-50975891 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 94

Conread position: 170-364
Cow position: chr4:4178332-4178523 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 97

Conread position: 170-385
Cow position: chr4:6519906-6520104 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 31, 36

Conread position: 170-394
Cow position: chr4:21359314-21359533 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 79

Conread position: 170-400
Cow position: chr4:12240138-12239911 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 98

Conread position: 170-402
Cow position: chr4:13958259-13958485 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 78

Conread position: 170-405
Cow position: chr4:34221835-34222058 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 209, 19

Conread position: 170-405
Cow position: chr4:49716866-49717088 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 211, 55

Conread position: 171-376
Cow position: chr4:493535-493347 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 83

Conread position: 171-377
Cow position: chr4:47462905-47463109 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 88

Conread position: 171-403
Cow position: chr4:20604785-20605002 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 89

Conread position: 171-405
Cow position: chr4:34178152-34177929 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 54

Conread position: 172-356
Cow position: chr4:61693438-61693252 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 166

Conread position: 172-394
Cow position: chr4:43318551-43318329 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 103

Conread position: 172-399
Cow position: chr4:356992-357217 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 122

Conread position: 172-401
Cow position: chr4:3356849-3356619 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 163

Conread position: 172-401
Cow position: chr4:12588416-12588642 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 91

Conread position: 172-401
Cow position: chr4:13494414-13494646 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 96

Conread position: 172-401
Cow position: chr4:16360994-16361235 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 86, 174

Conread position: 172-401
Cow position: chr4:16639694-16639924 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 163

Conread position: 172-401
Cow position: chr4:17924877-17924647 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 163

Conread position: 172-401
Cow position: chr4:25598401-25598171 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 163

Conread position: 172-401
Cow position: chr4:26876693-26876474 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 53

Conread position: 172-401
Cow position: chr4:31564199-31563969 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 30, 163

Conread position: 172-401
Cow position: chr4:33494639-33494869 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 163

Conread position: 172-401
Cow position: chr4:36897464-36897691 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 30, 53

Conread position: 172-401
Cow position: chr4:43882194-43882419 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 27, 102

Conread position: 172-401
Cow position: chr4:44726666-44726892 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 54

Conread position: 172-401
Cow position: chr4:67682281-67682511 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 163

Conread position: 173-394
Cow position: chr4:20067634-20067420 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 208, 27

Conread position: 173-399
Cow position: chr4:52963047-52962834 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 76

Conread position: 176-380
Cow position: chr4:14755583-14755382 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 37

Conread position: 176-394
Cow position: chr4:10882642-10882855 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 85

Conread position: 178-380
Cow position: chr4:65665304-65665102 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 25, 157

Conread position: 178-399
Cow position: chr4:1952475-1952255 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 62, 58

Conread position: 178-399
Cow position: chr4:5443735-5443513 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 157

Conread position: 178-401
Cow position: chr4:99128-98903 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 158

Conread position: 178-401
Cow position: chr4:57985082-57985306 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 157

Conread position: 178-402
Cow position: chr4:18423426-18423206 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 131

Conread position: 178-405
Cow position: chr4:14386911-14387139 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 157

Conread position: 178-405
Cow position: chr4:17092772-17092544 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 157

Conread position: 178-405
Cow position: chr4:17502241-17502013 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 163

Conread position: 178-405
Cow position: chr4:28653402-28653177 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 157

Conread position: 178-405
Cow position: chr4:41959990-41960218 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 157

Conread position: 179-355
Cow position: chr4:31638833-31638658 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 92

Conread position: 179-393
Cow position: chr4:60263066-60262859 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 70

Conread position: 182-402
Cow position: chr4:19252531-19252741 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 30

Conread position: 182-405
Cow position: chr4:19094080-19094296 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 195, 55

Conread position: 193-405
Cow position: chr4:14199274-14199488 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 140

Conread position: 205-399
Cow position: chr4:11813226-11813420 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 176, 78

Conread position: 207-314
Cow position: chr4:62569501-62569608 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 74, 29

Conread position: 213-405
Cow position: chr4:28832846-28833034 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 168, 85

Conread position: 215-405
Cow position: chr4:18102530-18102338 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 218-405
Cow position: chr4:33022505-33022320 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 163, 34

Conread position: 224-380
Cow position: chr4:33071697-33071542 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 110, 0

Show alignments to all cow chromosomes.