Cow genome map


           Conread name:
           rpigcf0_002377.y1
        

               Conread position:
               160-401
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               164-405
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               168-362
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               33, 38
               

               Conread position:
               169-405
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               170-334
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               170-394
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               170-395
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               180, 51
               

               Conread position:
               170-405
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               170-405
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               170-405
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 125
               

               Conread position:
               170-405
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               171-373
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 107
               

               Conread position:
               171-375
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               15, 113
               

               Conread position:
               171-394
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 164
               

               Conread position:
               171-405
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               171-405
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               172-316
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               172-361
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               38, 163
               

               Conread position:
               172-361
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               172-380
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 163
               

               Conread position:
               172-399
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 46
               

               Conread position:
               172-399
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               30, 164
               

               Conread position:
               172-399
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               7, 118
               

               Conread position:
               172-399
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               172-400
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 163
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 163
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               209, 64
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               30, 163
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               209, 150
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 173
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 163
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               30, 130
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               209, 162
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 162
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               30, 151
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               30, 164
               

               Conread position:
               172-401
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               29, 163
               

               Conread position:
               172-405
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               172-405
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 164
               

               Conread position:
               173-399
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 162
               

               Conread position:
               173-401
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 162
               

               Conread position:
               176-361
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               178-364
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               178-397
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               203, 46
               

               Conread position:
               178-401
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               29, 157
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 158
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 157
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 156
               

               Conread position:
               178-405
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               24, 124
               

               Conread position:
               179-399
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 86
               

               Conread position:
               180-394
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               24, 57
               

               Conread position:
               200-405
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               181, 134
               

               Conread position:
               200-405
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 36
               

               Conread position:
               200-405
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               181, 30
               

               Conread position:
               202-401
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               147, 132
               

               Conread position:
               202-405
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               179, 48
               

               Conread position:
               205-376
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               217-405
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               165, 66
               

               Conread position:
               239-399
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               242-399
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               47, 28
               
Show alignments to all cow chromosomes.