Cow genome map
| Conread name: | rpigcf0_002377.y1 |
| Conread position: | 168-405 |
| Cow position: | chr7:51015669-51015893 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 169-402 |
| Cow position: | chr7:996158-996386 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 170-339 |
| Cow position: | chr7:20533362-20533523 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 170-394 |
| Cow position: | chr7:60856642-60856425 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 170-394 |
| Cow position: | chr7:67495518-67495736 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 170-401 |
| Cow position: | chr7:444845-444614 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 170-402 |
| Cow position: | chr7:58376486-58376263 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 97 |
| Conread position: | 170-405 |
| Cow position: | chr7:1012089-1011861 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 170-405 |
| Cow position: | chr7:18445340-18445108 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 170-405 |
| Cow position: | chr7:27348271-27348037 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 42 |
| Conread position: | 170-405 |
| Cow position: | chr7:47974888-47974649 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 16, 113 |
| Conread position: | 170-405 |
| Cow position: | chr7:59685224-59685462 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 171-361 |
| Cow position: | chr7:1453060-1453247 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 100 |
| Conread position: | 171-366 |
| Cow position: | chr7:26870840-26871033 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 171-377 |
| Cow position: | chr7:21311865-21312074 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 171-398 |
| Cow position: | chr7:33332975-33333206 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 166 |
| Conread position: | 171-399 |
| Cow position: | chr7:6898-7130 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 171-401 |
| Cow position: | chr7:38398234-38398464 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 31, 8 |
| Conread position: | 171-405 |
| Cow position: | chr7:1609222-1608987 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 125 |
| Conread position: | 171-405 |
| Cow position: | chr7:25440918-25441146 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 164 |
| Conread position: | 171-405 |
| Cow position: | chr7:67429983-67430214 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 171-405 |
| Cow position: | chr7:67800241-67800472 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 172-318 |
| Cow position: | chr7:526384-526529 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 172-362 |
| Cow position: | chr7:40268561-40268379 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 7 |
| Conread position: | 172-374 |
| Cow position: | chr7:66906142-66906344 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-397 |
| Cow position: | chr7:8143561-8143335 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 27, 163 |
| Conread position: | 172-398 |
| Cow position: | chr7:34487328-34487556 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-401 |
| Cow position: | chr7:10430012-10429780 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 165 |
| Conread position: | 172-401 |
| Cow position: | chr7:13532498-13532268 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-401 |
| Cow position: | chr7:21233589-21233360 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 154 |
| Conread position: | 172-401 |
| Cow position: | chr7:21986819-21987048 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 172-401 |
| Cow position: | chr7:24807067-24806840 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 172-401 |
| Cow position: | chr7:25136263-25136492 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 172-401 |
| Cow position: | chr7:45947732-45947508 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 172-401 |
| Cow position: | chr7:55536512-55536282 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 30, 163 |
| Conread position: | 172-401 |
| Cow position: | chr7:61578917-61579146 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 172-401 |
| Cow position: | chr7:61809423-61809653 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 163 |
| Conread position: | 172-401 |
| Cow position: | chr7:64239577-64239347 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 171 |
| Conread position: | 172-402 |
| Cow position: | chr7:21313321-21313555 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 172-402 |
| Cow position: | chr7:58337624-58337395 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 30, 162 |
| Conread position: | 172-405 |
| Cow position: | chr7:1371230-1370997 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 172-405 |
| Cow position: | chr7:57563685-57563456 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 28 |
| Conread position: | 173-405 |
| Cow position: | chr7:1403072-1402843 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 119 |
| Conread position: | 174-394 |
| Cow position: | chr7:59139041-59139257 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 130 |
| Conread position: | 178-396 |
| Cow position: | chr7:65872186-65871968 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 178-401 |
| Cow position: | chr7:14138173-14137947 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 21, 157 |
| Conread position: | 178-401 |
| Cow position: | chr7:33404969-33404751 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 178-402 |
| Cow position: | chr7:19046029-19045805 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 178-402 |
| Cow position: | chr7:20060908-20061133 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 24, 163 |
| Conread position: | 178-402 |
| Cow position: | chr7:43396992-43396767 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 131, 158 |
| Conread position: | 178-405 |
| Cow position: | chr7:3126110-3126338 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr7:3299747-3299519 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr7:6721562-6721789 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 178-405 |
| Cow position: | chr7:7259942-7260168 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr7:11462718-11462490 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr7:20514365-20514138 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 178-405 |
| Cow position: | chr7:48805016-48804787 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 178-405 |
| Cow position: | chr7:62445731-62445503 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 157 |
| Conread position: | 184-405 |
| Cow position: | chr7:31095840-31095615 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 191-405 |
| Cow position: | chr7:59680283-59680496 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 202-358 |
| Cow position: | chr7:5261470-5261311 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 34 |
| Conread position: | 213-403 |
| Cow position: | chr7:30118027-30117838 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 166, 58 |
| Conread position: | 243-405 |
| Cow position: | chr7:68896143-68896302 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 67 |
Show alignments to all cow chromosomes.