Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_002703.y1
        

               Conread position:
               3-247
               

               Cow position:
               chr1:70416512-70416747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               8, 110
               

               Conread position:
               5-283
               

               Cow position:
               chr1:73721608-73721338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               9-283
               

               Cow position:
               chr1:36688140-36688401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               9-309
               

               Cow position:
               chr1:53370323-53370034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               9-310
               

               Cow position:
               chr1:24777746-24778035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               10-219
               

               Cow position:
               chr1:72069866-72070073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               10-256
               

               Cow position:
               chr1:10716739-10716501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               11-287
               

               Cow position:
               chr1:78857092-78857357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               270, 20
               

               Conread position:
               12-250
               

               Cow position:
               chr1:25021844-25022065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               15-260
               

               Cow position:
               chr1:7443213-7442976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               15-274
               

               Cow position:
               chr1:76735244-76735492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               5, 61
               

               Conread position:
               15-309
               

               Cow position:
               chr1:65103860-65103571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               15-310
               

               Cow position:
               chr1:73457863-73458142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               156, 34
               

               Conread position:
               16-172
               

               Cow position:
               chr1:86592642-86592792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               16-240
               

               Cow position:
               chr1:53540815-53540595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               92, 15
               

               Conread position:
               16-257
               

               Cow position:
               chr1:93590360-93590583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               16-274
               

               Cow position:
               chr1:20871325-20871573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               16-298
               

               Cow position:
               chr1:72422176-72422445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               16-300
               

               Cow position:
               chr1:90904525-90904795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               16-310
               

               Cow position:
               chr1:54156503-54156782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               17-238
               

               Cow position:
               chr1:1380231-1380019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               17-238
               

               Cow position:
               chr1:43296483-43296696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               17-274
               

               Cow position:
               chr1:46030135-46030375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               17-293
               

               Cow position:
               chr1:61005328-61005593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               17-309
               

               Cow position:
               chr1:43352424-43352705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               264, 25
               

               Conread position:
               17-309
               

               Cow position:
               chr1:95153477-95153172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               12, 241
               

               Conread position:
               17-310
               

               Cow position:
               chr1:47790439-47790714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               17-310
               

               Cow position:
               chr1:57297738-57297428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 142
               

               Conread position:
               18-253
               

               Cow position:
               chr1:23055286-23055054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               105, 10
               

               Conread position:
               18-294
               

               Cow position:
               chr1:101177753-101177484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               18-310
               

               Cow position:
               chr1:22824137-22823854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               265, 35
               

               Conread position:
               19-211
               

               Cow position:
               chr1:100152512-100152327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               19-234
               

               Cow position:
               chr1:22231878-22231674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               19-299
               

               Cow position:
               chr1:59020900-59020621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 58
               

               Conread position:
               19-310
               

               Cow position:
               chr1:17317114-17317412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               20-253
               

               Cow position:
               chr1:81473391-81473162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 95
               

               Conread position:
               20-257
               

               Cow position:
               chr1:84595119-84594891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               20-291
               

               Cow position:
               chr1:102768401-102768148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               20-295
               

               Cow position:
               chr1:52435502-52435237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               20-298
               

               Cow position:
               chr1:7453141-7452882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 87
               

               Conread position:
               21-218
               

               Cow position:
               chr1:69176513-69176710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               85, 10
               

               Conread position:
               21-219
               

               Cow position:
               chr1:78690462-78690258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               21-222
               

               Cow position:
               chr1:709677-709862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               21-234
               

               Cow position:
               chr1:22448017-22448228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               104, 21
               

               Conread position:
               21-234
               

               Cow position:
               chr1:96136708-96136493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               104, 153
               

               Conread position:
               21-236
               

               Cow position:
               chr1:45535991-45535787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               126, 16
               

               Conread position:
               21-239
               

               Cow position:
               chr1:79178856-79178649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               21-240
               

               Cow position:
               chr1:47883368-47883596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               26, 196
               

               Conread position:
               21-245
               

               Cow position:
               chr1:46939651-46939870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 7
               

               Conread position:
               21-251
               

               Cow position:
               chr1:24656482-24656254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               21-251
               

               Cow position:
               chr1:98556893-98557110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               21-278
               

               Cow position:
               chr1:71945855-71946100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               21-282
               

               Cow position:
               chr1:97232197-97231939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               95, 53
               

               Conread position:
               21-283
               

               Cow position:
               chr1:38706626-38706876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               21-288
               

               Cow position:
               chr1:84103834-84104088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               21-296
               

               Cow position:
               chr1:81477637-81477907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               266, 88
               

               Conread position:
               21-300
               

               Cow position:
               chr1:95835569-95835836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               21-308
               

               Cow position:
               chr1:38419253-38418981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               21-308
               

               Cow position:
               chr1:74751403-74751682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               221, 26
               

               Conread position:
               21-310
               

               Cow position:
               chr1:6590265-6589992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               21-310
               

               Cow position:
               chr1:73584180-73584459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               22-310
               

               Cow position:
               chr1:1878249-1877981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               22-310
               

               Cow position:
               chr1:22730958-22730692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               22-310
               

               Cow position:
               chr1:64572736-64572465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               259, 20
               

               Conread position:
               23-243
               

               Cow position:
               chr1:86383570-86383789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               23-272
               

               Cow position:
               chr1:2462597-2462371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               23-305
               

               Cow position:
               chr1:96081703-96081437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               23-308
               

               Cow position:
               chr1:92996663-92996943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               261, 19
               

               Conread position:
               23-310
               

               Cow position:
               chr1:21561243-21560967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               24-238
               

               Cow position:
               chr1:68730229-68730021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               24-253
               

               Cow position:
               chr1:76518647-76518429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               24-254
               

               Cow position:
               chr1:83004887-83004659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               165, 23
               

               Conread position:
               24-274
               

               Cow position:
               chr1:46245514-46245763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               24-303
               

               Cow position:
               chr1:51394642-51394376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               24-310
               

               Cow position:
               chr1:63434575-63434854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               24-310
               

               Cow position:
               chr1:72105622-72105363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               24-310
               

               Cow position:
               chr1:91065935-91066201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               252, 23
               

               Conread position:
               25-227
               

               Cow position:
               chr1:25956119-25955928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               25-239
               

               Cow position:
               chr1:68400046-68400266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               25-271
               

               Cow position:
               chr1:24132841-24133071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               25-306
               

               Cow position:
               chr1:101159147-101158871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               123, 22
               

               Conread position:
               25-310
               

               Cow position:
               chr1:72068614-72068887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 12
               

               Conread position:
               25-310
               

               Cow position:
               chr1:92684460-92684740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               87, 22
               

               Conread position:
               26-306
               

               Cow position:
               chr1:3962455-3962740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               223, 101
               

               Conread position:
               27-223
               

               Cow position:
               chr1:6986509-6986705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               27-233
               

               Cow position:
               chr1:6963125-6962917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               27-278
               

               Cow position:
               chr1:11488936-11489177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               27-282
               

               Cow position:
               chr1:8287410-8287651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               27-308
               

               Cow position:
               chr1:68763464-68763730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               27-309
               

               Cow position:
               chr1:101835035-101834774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               115, 22
               

               Conread position:
               27-310
               

               Cow position:
               chr1:6304657-6304911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               27-310
               

               Cow position:
               chr1:11226009-11226293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 162
               

               Conread position:
               27-310
               

               Cow position:
               chr1:37726195-37726468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               27-310
               

               Cow position:
               chr1:55428734-55429007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 10
               

               Conread position:
               28-239
               

               Cow position:
               chr1:53403003-53402802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               28-252
               

               Cow position:
               chr1:49299904-49299666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               28-252
               

               Cow position:
               chr1:60603351-60603569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               28-274
               

               Cow position:
               chr1:852390-852156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               28-274
               

               Cow position:
               chr1:85688402-85688164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               28-310
               

               Cow position:
               chr1:628188-627913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               29-224
               

               Cow position:
               chr1:79001626-79001812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               29-306
               

               Cow position:
               chr1:40192481-40192738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               29-310
               

               Cow position:
               chr1:15547683-15547423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               29-310
               

               Cow position:
               chr1:45555583-45555316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               255, 48
               

               Conread position:
               29-310
               

               Cow position:
               chr1:69551260-69551534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               30-247
               

               Cow position:
               chr1:94823173-94823379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               30-310
               

               Cow position:
               chr1:22526091-22525827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               261, 55
               

               Conread position:
               30-310
               

               Cow position:
               chr1:100474456-100474183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               246, 79
               

               Conread position:
               31-267
               

               Cow position:
               chr1:68844938-68845176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 60
               

               Conread position:
               31-294
               

               Cow position:
               chr1:67529273-67529022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               31-308
               

               Cow position:
               chr1:186065-186323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               250, 40
               

               Conread position:
               31-309
               

               Cow position:
               chr1:59519124-59518871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               140, 11
               

               Conread position:
               31-310
               

               Cow position:
               chr1:78067833-78068113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               32-222
               

               Cow position:
               chr1:60478478-60478673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               90, 149
               

               Conread position:
               32-232
               

               Cow position:
               chr1:40238798-40238595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               53, 66
               

               Conread position:
               32-274
               

               Cow position:
               chr1:6731394-6731167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               32-278
               

               Cow position:
               chr1:43311558-43311790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               149, 10
               

               Conread position:
               32-283
               

               Cow position:
               chr1:87094998-87095237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               32-300
               

               Cow position:
               chr1:62998016-62997758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               253, 77
               

               Conread position:
               32-305
               

               Cow position:
               chr1:71789932-71790193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               32-307
               

               Cow position:
               chr1:8833-8571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               52, 56
               

               Conread position:
               32-308
               

               Cow position:
               chr1:6394772-6394512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               32-310
               

               Cow position:
               chr1:500391-500124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               267, 81
               

               Conread position:
               32-310
               

               Cow position:
               chr1:25735083-25734820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               32-310
               

               Cow position:
               chr1:48443978-48444242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               32-310
               

               Cow position:
               chr1:76470869-76470607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               32-310
               

               Cow position:
               chr1:90975860-90976133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               33-239
               

               Cow position:
               chr1:75080324-75080533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 153
               

               Conread position:
               33-310
               

               Cow position:
               chr1:816181-816460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 190
               

               Conread position:
               33-310
               

               Cow position:
               chr1:85162314-85162598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               34-227
               

               Cow position:
               chr1:29971327-29971509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               34-239
               

               Cow position:
               chr1:54569914-54569719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               34-254
               

               Cow position:
               chr1:1605918-1606128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               34-284
               

               Cow position:
               chr1:96019441-96019205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               247, 39
               

               Conread position:
               34-299
               

               Cow position:
               chr1:63530771-63530522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               34-304
               

               Cow position:
               chr1:81481170-81481427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               34-308
               

               Cow position:
               chr1:98461529-98461240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               6, 259
               

               Conread position:
               34-309
               

               Cow position:
               chr1:30983279-30983538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               132, 74
               

               Conread position:
               35-247
               

               Cow position:
               chr1:38544034-38544239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               35-260
               

               Cow position:
               chr1:42404361-42404136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 195
               

               Conread position:
               35-274
               

               Cow position:
               chr1:45478634-45478873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               102, 12
               

               Conread position:
               35-310
               

               Cow position:
               chr1:874876-874602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               6, 70
               

               Conread position:
               35-310
               

               Cow position:
               chr1:38277813-38278079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               35-310
               

               Cow position:
               chr1:79164869-79165133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               36-282
               

               Cow position:
               chr1:64329143-64328899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               36-310
               

               Cow position:
               chr1:34771288-34771553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               37-198
               

               Cow position:
               chr1:44814453-44814608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               37-208
               

               Cow position:
               chr1:6398293-6398467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               37-235
               

               Cow position:
               chr1:72356577-72356381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               37-238
               

               Cow position:
               chr1:69378388-69378577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               37-239
               

               Cow position:
               chr1:64458182-64457986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               37-251
               

               Cow position:
               chr1:52679799-52679595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               75, 41
               

               Conread position:
               37-254
               

               Cow position:
               chr1:55194020-55194240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               37-257
               

               Cow position:
               chr1:76739704-76739907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               37-268
               

               Cow position:
               chr1:19599150-19599368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               37-274
               

               Cow position:
               chr1:45873837-45874092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               37-274
               

               Cow position:
               chr1:102648490-102648264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               37-306
               

               Cow position:
               chr1:71253324-71253597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               60, 191
               

               Conread position:
               37-307
               

               Cow position:
               chr1:3923594-3923842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               37-307
               

               Cow position:
               chr1:65318787-65318529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               37-308
               

               Cow position:
               chr1:16855493-16855743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               37-310
               

               Cow position:
               chr1:3815471-3815743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               206, 48
               

               Conread position:
               37-310
               

               Cow position:
               chr1:4391058-4391331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               172, 78
               

               Conread position:
               37-310
               

               Cow position:
               chr1:76657843-76658128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               37-310
               

               Cow position:
               chr1:77683584-77683309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               71, 248
               

               Conread position:
               37-310
               

               Cow position:
               chr1:79844689-79844418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 73
               

               Conread position:
               37-310
               

               Cow position:
               chr1:86113186-86113453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               239, 72
               

               Conread position:
               38-206
               

               Cow position:
               chr1:69911320-69911157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               38-239
               

               Cow position:
               chr1:48301242-48301430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               38-257
               

               Cow position:
               chr1:56128583-56128806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 50
               

               Conread position:
               38-310
               

               Cow position:
               chr1:57089472-57089732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               238, 8
               

               Conread position:
               38-310
               

               Cow position:
               chr1:88913529-88913270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               246, 74
               

               Conread position:
               38-310
               

               Cow position:
               chr1:101822295-101822550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               39-251
               

               Cow position:
               chr1:46172812-46172614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               39-268
               

               Cow position:
               chr1:101280530-101280742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               39-271
               

               Cow position:
               chr1:45315423-45315647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               39-274
               

               Cow position:
               chr1:37917971-37918203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               39-284
               

               Cow position:
               chr1:54732249-54732507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               99, 37
               

               Conread position:
               39-294
               

               Cow position:
               chr1:48213937-48214189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               71, 89
               

               Conread position:
               39-310
               

               Cow position:
               chr1:30189365-30189098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               182, 74
               

               Conread position:
               39-310
               

               Cow position:
               chr1:48105217-48105482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               234, 69
               

               Conread position:
               42-255
               

               Cow position:
               chr1:87149611-87149810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               42-274
               

               Cow position:
               chr1:3417583-3417334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               42-309
               

               Cow position:
               chr1:77739929-77739668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               232, 67
               

               Conread position:
               42-310
               

               Cow position:
               chr1:44507173-44506920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               233, 64
               

               Conread position:
               42-310
               

               Cow position:
               chr1:50930775-50931025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               243, 67
               

               Conread position:
               42-310
               

               Cow position:
               chr1:53374632-53374383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               234, 31
               

               Conread position:
               42-310
               

               Cow position:
               chr1:54258774-54258514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 65
               

               Conread position:
               44-256
               

               Cow position:
               chr1:95049662-95049860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               44-271
               

               Cow position:
               chr1:759209-759429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               44-283
               

               Cow position:
               chr1:43872106-43872342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               44-309
               

               Cow position:
               chr1:79004179-79003926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               237, 65
               

               Conread position:
               44-309
               

               Cow position:
               chr1:82337577-82337828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               45-288
               

               Cow position:
               chr1:65639125-65638890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               45-308
               

               Cow position:
               chr1:72813820-72813568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               45-309
               

               Cow position:
               chr1:34856422-34856678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               46-175
               

               Cow position:
               chr1:95101152-95101023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               46-233
               

               Cow position:
               chr1:70292004-70291814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               46-237
               

               Cow position:
               chr1:55110703-55110515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               46-237
               

               Cow position:
               chr1:100513098-100512920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               46-239
               

               Cow position:
               chr1:74919774-74919958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               46-247
               

               Cow position:
               chr1:77685777-77685968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               46-251
               

               Cow position:
               chr1:68710485-68710286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               197, 63
               

               Conread position:
               46-252
               

               Cow position:
               chr1:78029825-78030024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               46-268
               

               Cow position:
               chr1:1496326-1496540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               46-271
               

               Cow position:
               chr1:89341754-89341997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               46-272
               

               Cow position:
               chr1:57088052-57087830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               189, 6
               

               Conread position:
               46-273
               

               Cow position:
               chr1:6381977-6381759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               46-273
               

               Cow position:
               chr1:79719009-79718797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               167, 49
               

               Conread position:
               46-274
               

               Cow position:
               chr1:5751516-5751299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               46-274
               

               Cow position:
               chr1:50765815-50765598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               46-274
               

               Cow position:
               chr1:51860363-51860575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               46-274
               

               Cow position:
               chr1:95618842-95618628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               46-278
               

               Cow position:
               chr1:67291360-67291135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               205, 61
               

               Conread position:
               46-283
               

               Cow position:
               chr1:63992133-63992358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               183, 12
               

               Conread position:
               46-283
               

               Cow position:
               chr1:81515440-81515208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               230, 69
               

               Conread position:
               46-283
               

               Cow position:
               chr1:90267925-90267696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               230, 61
               

               Conread position:
               46-283
               

               Cow position:
               chr1:98897489-98897716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               46-292
               

               Cow position:
               chr1:81858700-81858937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               171, 61
               

               Conread position:
               46-306
               

               Cow position:
               chr1:61741763-61742014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               162, 25
               

               Conread position:
               46-308
               

               Cow position:
               chr1:47658549-47658300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               46-309
               

               Cow position:
               chr1:37706768-37707021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 27
               

               Conread position:
               46-309
               

               Cow position:
               chr1:88360086-88359833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               46-310
               

               Cow position:
               chr1:16961793-16962057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               68, 233
               

               Conread position:
               46-310
               

               Cow position:
               chr1:52912691-52912947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               46-310
               

               Cow position:
               chr1:61846359-61846097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               46-310
               

               Cow position:
               chr1:64803896-64804153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               245, 63
               

               Conread position:
               46-310
               

               Cow position:
               chr1:75250313-75250063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               239, 41
               

               Conread position:
               46-310
               

               Cow position:
               chr1:82513151-82513404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               237, 48
               

               Conread position:
               47-252
               

               Cow position:
               chr1:49297851-49297659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 62
               

               Conread position:
               47-265
               

               Cow position:
               chr1:73551302-73551515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               142, 62
               

               Conread position:
               47-301
               

               Cow position:
               chr1:8670988-8670732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               47-304
               

               Cow position:
               chr1:29474152-29474390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               241, 38
               

               Conread position:
               47-305
               

               Cow position:
               chr1:71228295-71228044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               229, 61
               

               Conread position:
               47-308
               

               Cow position:
               chr1:99221142-99221401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               47-310
               

               Cow position:
               chr1:21578010-21577761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 69
               

               Conread position:
               47-310
               

               Cow position:
               chr1:33206674-33206924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               48-240
               

               Cow position:
               chr1:29671021-29671204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               48-273
               

               Cow position:
               chr1:96558647-96558863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               135, 66
               

               Conread position:
               49-274
               

               Cow position:
               chr1:73719669-73719447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 59
               

               Conread position:
               50-310
               

               Cow position:
               chr1:95072540-95072281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               233, 59
               

               Conread position:
               51-238
               

               Cow position:
               chr1:23373057-23372881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               53-294
               

               Cow position:
               chr1:86340264-86340498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               53-310
               

               Cow position:
               chr1:47886286-47886534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               183, 56
               

               Conread position:
               53-310
               

               Cow position:
               chr1:60987186-60986937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               184, 53
               

               Conread position:
               53-310
               

               Cow position:
               chr1:88618801-88618547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               54-266
               

               Cow position:
               chr1:101525727-101525931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               178, 55
               

               Conread position:
               55-304
               

               Cow position:
               chr1:98413968-98413725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               231, 18
               

               Conread position:
               56-235
               

               Cow position:
               chr1:362946-362776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               56-249
               

               Cow position:
               chr1:81668621-81668806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               56-253
               

               Cow position:
               chr1:96518893-96518700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               56-271
               

               Cow position:
               chr1:31855038-31855258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               56-309
               

               Cow position:
               chr1:48730617-48730875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               54, 197
               

               Conread position:
               56-310
               

               Cow position:
               chr1:17196434-17196678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               228, 52
               

               Conread position:
               57-256
               

               Cow position:
               chr1:23633737-23633928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               174, 51
               

               Conread position:
               57-299
               

               Cow position:
               chr1:21093309-21093078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               57-307
               

               Cow position:
               chr1:58186957-58186700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 239
               

               Conread position:
               57-309
               

               Cow position:
               chr1:49082936-49082693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               225, 58
               

               Conread position:
               58-310
               

               Cow position:
               chr1:2975800-2976042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               176, 51
               

               Conread position:
               61-255
               

               Cow position:
               chr1:31630097-31630282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               62-310
               

               Cow position:
               chr1:99642184-99642414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               74-310
               

               Cow position:
               chr1:49433088-49433309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               76-254
               

               Cow position:
               chr1:64706676-64706499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               105-309
               

               Cow position:
               chr1:58037173-58036971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               109-271
               

               Cow position:
               chr1:64019371-64019532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               111-274
               

               Cow position:
               chr1:24561362-24561523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               111-274
               

               Cow position:
               chr1:24570800-24570961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               114-309
               

               Cow position:
               chr1:7023267-7023071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               114-310
               

               Cow position:
               chr1:100569301-100569106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               182, 13
               

               Conread position:
               115-253
               

               Cow position:
               chr1:57359609-57359471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 116
               

               Conread position:
               118-272
               

               Cow position:
               chr1:3762320-3762467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               119-283
               

               Cow position:
               chr1:55230117-55229953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-310
               

               Cow position:
               chr1:93528839-93528650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               82, 111
               

               Conread position:
               123-309
               

               Cow position:
               chr1:45019662-45019855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               124-252
               

               Cow position:
               chr1:44835649-44835784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               124-258
               

               Cow position:
               chr1:53640848-53640717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               124-304
               

               Cow position:
               chr1:80422408-80422238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               124-308
               

               Cow position:
               chr1:32001185-32001367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               152, 96
               

               Conread position:
               125-235
               

               Cow position:
               chr1:28985431-28985540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               125-251
               

               Cow position:
               chr1:79409589-79409460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               125-253
               

               Cow position:
               chr1:8353516-8353386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               125-274
               

               Cow position:
               chr1:74081847-74081995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               125-301
               

               Cow position:
               chr1:71915985-71916160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               125-310
               

               Cow position:
               chr1:4032767-4032580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               125-310
               

               Cow position:
               chr1:10941960-10942146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               147, 56
               

               Conread position:
               125-310
               

               Cow position:
               chr1:41115584-41115763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               130, 96
               

               Conread position:
               126-236
               

               Cow position:
               chr1:70044487-70044379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               100, 89
               

               Conread position:
               126-307
               

               Cow position:
               chr1:31272307-31272488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               127-237
               

               Cow position:
               chr1:52506039-52506149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-274
               

               Cow position:
               chr1:67918890-67918743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-294
               

               Cow position:
               chr1:242690-242524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               161, 149
               

               Conread position:
               127-310
               

               Cow position:
               chr1:19885514-19885333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               149, 93
               

               Conread position:
               127-310
               

               Cow position:
               chr1:52995159-52994972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               127-310
               

               Cow position:
               chr1:71796180-71796364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 83
               

               Conread position:
               127-310
               

               Cow position:
               chr1:92989723-92989541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               154, 161
               

               Conread position:
               128-274
               

               Cow position:
               chr1:63079139-63078996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               128-310
               

               Cow position:
               chr1:85647648-85647830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               129-257
               

               Cow position:
               chr1:97939088-97938960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               129-269
               

               Cow position:
               chr1:46100709-46100851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-270
               

               Cow position:
               chr1:22461107-22461248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               129-309
               

               Cow position:
               chr1:10778694-10778518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               129-309
               

               Cow position:
               chr1:78794100-78794272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               129-309
               

               Cow position:
               chr1:101632205-101632386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               130-291
               

               Cow position:
               chr1:61011311-61011152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               130-303
               

               Cow position:
               chr1:30047473-30047641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               161, 68
               

               Conread position:
               131-233
               

               Cow position:
               chr1:76080934-76080834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               131-282
               

               Cow position:
               chr1:3914790-3914939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               131-305
               

               Cow position:
               chr1:39068827-39068999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               131-307
               

               Cow position:
               chr1:77892263-77892093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               131-310
               

               Cow position:
               chr1:53308265-53308442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               145, 49
               

               Conread position:
               131-310
               

               Cow position:
               chr1:98576176-98575997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 160
               

               Conread position:
               132-283
               

               Cow position:
               chr1:5636929-5637082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               132-303
               

               Cow position:
               chr1:77133882-77133709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               133-233
               

               Cow position:
               chr1:84787397-84787297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-250
               

               Cow position:
               chr1:81638675-81638558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-310
               

               Cow position:
               chr1:100552102-100551921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 148
               

               Conread position:
               134-304
               

               Cow position:
               chr1:6854182-6854347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               149, 80
               

               Conread position:
               134-309
               

               Cow position:
               chr1:82880770-82880597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               155, 91
               

               Conread position:
               134-309
               

               Cow position:
               chr1:87937023-87936852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               134-309
               

               Cow position:
               chr1:91811905-91811734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               134-310
               

               Cow position:
               chr1:52052591-52052769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               135-257
               

               Cow position:
               chr1:32014321-32014201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               135-274
               

               Cow position:
               chr1:36875151-36875016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               135-274
               

               Cow position:
               chr1:65881930-65881793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               135-282
               

               Cow position:
               chr1:39417990-39418133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               135-283
               

               Cow position:
               chr1:76436605-76436458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               135-287
               

               Cow position:
               chr1:54157421-54157268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               107, 144
               

               Conread position:
               135-303
               

               Cow position:
               chr1:89741870-89742043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               135-304
               

               Cow position:
               chr1:5580180-5580016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               141, 32
               

               Conread position:
               135-304
               

               Cow position:
               chr1:30417923-30418082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               135-304
               

               Cow position:
               chr1:42541724-42541555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               5, 142
               

               Conread position:
               135-304
               

               Cow position:
               chr1:43311906-43312075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               148, 156
               

               Conread position:
               135-304
               

               Cow position:
               chr1:68672477-68672642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               156, 93
               

               Conread position:
               135-304
               

               Cow position:
               chr1:81613514-81613344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               135-307
               

               Cow position:
               chr1:28177129-28176964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               135-308
               

               Cow position:
               chr1:11729300-11729135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               135-309
               

               Cow position:
               chr1:23512535-23512706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               135-309
               

               Cow position:
               chr1:41252285-41252454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               159, 101
               

               Conread position:
               135-309
               

               Cow position:
               chr1:54478454-54478277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               135-309
               

               Cow position:
               chr1:76019573-76019743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               141, 6
               

               Conread position:
               135-309
               

               Cow position:
               chr1:78697647-78697817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               135-309
               

               Cow position:
               chr1:84203636-84203465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               135-309
               

               Cow position:
               chr1:97696869-97696695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 84
               

               Conread position:
               135-309
               

               Cow position:
               chr1:101507484-101507311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               146, 30
               

               Conread position:
               135-310
               

               Cow position:
               chr1:24534132-24534302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               135-310
               

               Cow position:
               chr1:42868815-42868986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               135-310
               

               Cow position:
               chr1:56477717-56477539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               135-310
               

               Cow position:
               chr1:73936019-73936200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               135-310
               

               Cow position:
               chr1:81580302-81580121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 77
               

               Conread position:
               135-310
               

               Cow position:
               chr1:85549954-85550126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               136-240
               

               Cow position:
               chr1:32217365-32217262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               136-257
               

               Cow position:
               chr1:92603143-92603022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-282
               

               Cow position:
               chr1:6031748-6031601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               136-307
               

               Cow position:
               chr1:22035735-22035564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               148, 133
               

               Conread position:
               136-309
               

               Cow position:
               chr1:8349200-8349364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               136-309
               

               Cow position:
               chr1:56225908-56225741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               136-309
               

               Cow position:
               chr1:68676486-68676314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 106
               

               Conread position:
               136-309
               

               Cow position:
               chr1:80988470-80988298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               131, 31
               

               Conread position:
               136-310
               

               Cow position:
               chr1:4027987-4027819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               155, 62
               

               Conread position:
               136-310
               

               Cow position:
               chr1:84768755-84768928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               136-310
               

               Cow position:
               chr1:98594689-98594524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               137-268
               

               Cow position:
               chr1:42178868-42178737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               137-274
               

               Cow position:
               chr1:42360411-42360272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               137-282
               

               Cow position:
               chr1:51531878-51531731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 94
               

               Conread position:
               137-305
               

               Cow position:
               chr1:26894849-26895021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 158
               

               Conread position:
               137-307
               

               Cow position:
               chr1:34159959-34159790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               137-309
               

               Cow position:
               chr1:8347246-8347076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               137-310
               

               Cow position:
               chr1:74928007-74927834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               159, 139
               

               Conread position:
               137-310
               

               Cow position:
               chr1:93554959-93554790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               138-307
               

               Cow position:
               chr1:7908159-7907990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               155, 148
               

               Conread position:
               139-242
               

               Cow position:
               chr1:70146790-70146893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               139-283
               

               Cow position:
               chr1:81629729-81629871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               139-308
               

               Cow position:
               chr1:86073717-86073548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               154, 137
               

               Conread position:
               139-310
               

               Cow position:
               chr1:42138979-42138808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               140-292
               

               Cow position:
               chr1:81809019-81809169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               140-310
               

               Cow position:
               chr1:7971532-7971367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 137
               

               Conread position:
               140-310
               

               Cow position:
               chr1:45223701-45223531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-273
               

               Cow position:
               chr1:38205593-38205461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-274
               

               Cow position:
               chr1:69940704-69940837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-308
               

               Cow position:
               chr1:69539810-69539651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               141-310
               

               Cow position:
               chr1:19466170-19466008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               142-251
               

               Cow position:
               chr1:3776217-3776326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-310
               

               Cow position:
               chr1:68618815-68618981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               143-303
               

               Cow position:
               chr1:21787453-21787289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               143-307
               

               Cow position:
               chr1:77880617-77880783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               133, 78
               

               Conread position:
               144-310
               

               Cow position:
               chr1:43822515-43822352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               147, 73
               

               Conread position:
               145-283
               

               Cow position:
               chr1:97144351-97144489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               60, 75
               

               Conread position:
               148-289
               

               Cow position:
               chr1:5006273-5006133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               149-283
               

               Cow position:
               chr1:95215079-95215213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               149-309
               

               Cow position:
               chr1:37309408-37309565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               149-310
               

               Cow position:
               chr1:36932265-36932109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               150-274
               

               Cow position:
               chr1:26615964-26616090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               150-281
               

               Cow position:
               chr1:88111981-88111854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               150-308
               

               Cow position:
               chr1:74955911-74956067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               150-310
               

               Cow position:
               chr1:26702097-26702255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 64
               

               Conread position:
               153-310
               

               Cow position:
               chr1:75142104-75141949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               154-297
               

               Cow position:
               chr1:102345929-102346072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               156-308
               

               Cow position:
               chr1:60490607-60490456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               156-309
               

               Cow position:
               chr1:56635202-56635048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               125, 109
               

               Conread position:
               156-310
               

               Cow position:
               chr1:95637936-95637782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-310
               

               Cow position:
               chr1:43703511-43703359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               160-308
               

               Cow position:
               chr1:30504601-30504455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               160-309
               

               Cow position:
               chr1:53425277-53425128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 117
               

               Conread position:
               160-310
               

               Cow position:
               chr1:26729814-26729668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               169-304
               

               Cow position:
               chr1:4374246-4374382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               171-310
               

               Cow position:
               chr1:85597027-85596893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               105, 66
               

               Conread position:
               172-310
               

               Cow position:
               chr1:68951713-68951579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               174-310
               

               Cow position:
               chr1:6788197-6788334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               117, 102
               

               Conread position:
               187-310
               

               Cow position:
               chr1:102647200-102647320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               193-310
               

               Cow position:
               chr1:99311361-99311478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               25, 83
               

               Conread position:
               197-309
               

               Cow position:
               chr1:57639452-57639564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 94
               
Show alignments to all cow chromosomes.
Conread position:	3-247
Cow position:	chr1:70416512-70416747 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	176
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	8, 110
Conread position:	5-283
Cow position:	chr1:73721608-73721338 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	201
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	15, 106
Conread position:	9-283
Cow position:	chr1:36688140-36688401 (view UCSC Genome Browser custom track)
Alignm length:	277
Alignm identity:	195
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	11, 66
Conread position:	9-309
Cow position:	chr1:53370323-53370034 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	208
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	34, 66
Conread position:	9-310
Cow position:	chr1:24777746-24778035 (view UCSC Genome Browser custom track)
Alignm length:	303
Alignm identity:	213
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	10, 34
Conread position:	10-219
Cow position:	chr1:72069866-72070073 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	153
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	13, 48
Conread position:	10-256
Cow position:	chr1:10716739-10716501 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	166
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	32, 0
Conread position:	11-287
Cow position:	chr1:78857092-78857357 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	192
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	270, 20
Conread position:	12-250
Cow position:	chr1:25021844-25022065 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	170
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	15, 31
Conread position:	15-260
Cow position:	chr1:7443213-7442976 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	169
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	16, 0
Conread position:	15-274
Cow position:	chr1:76735244-76735492 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	194
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	5, 61
Conread position:	15-309
Cow position:	chr1:65103860-65103571 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	220
Alignm E-value:	4.2039e-45
Alignm gaps (pig, cow):	8, 28
Conread position:	15-310
Cow position:	chr1:73457863-73458142 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	202
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	156, 34
Conread position:	16-172
Cow position:	chr1:86592642-86592792 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	117
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	12, 0
Conread position:	16-240
Cow position:	chr1:53540815-53540595 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	160
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	92, 15
Conread position:	16-257
Cow position:	chr1:93590360-93590583 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	165
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	31, 0
Conread position:	16-274
Cow position:	chr1:20871325-20871573 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	180
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	8, 17
Conread position:	16-298
Cow position:	chr1:72422176-72422445 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	202
Alignm E-value:	7e-40
Alignm gaps (pig, cow):	26, 0
Conread position:	16-300
Cow position:	chr1:90904525-90904795 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	188
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	18, 94
Conread position:	16-310
Cow position:	chr1:54156503-54156782 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	219
Alignm E-value:	0
Alignm gaps (pig, cow):	99, 0