Cow genome map

Conread name: rpigcf0_002703.y1

Conread position: 5-310
Cow position: chr15:21941993-21941700 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 12

Conread position: 8-205
Cow position: chr15:18647083-18646885 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 39, 115

Conread position: 8-309
Cow position: chr15:14281393-14281694 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 34

Conread position: 14-217
Cow position: chr15:33729748-33729945 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 159, 33

Conread position: 15-308
Cow position: chr15:21420808-21421080 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 61

Conread position: 15-310
Cow position: chr15:22938902-22938619 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 16-310
Cow position: chr15:20534588-20534300 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 260, 37

Conread position: 17-257
Cow position: chr15:12357471-12357709 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 30, 78

Conread position: 17-272
Cow position: chr15:4248014-4248255 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 17-285
Cow position: chr15:22984427-22984694 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 97

Conread position: 17-305
Cow position: chr15:275510-275794 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 161, 29

Conread position: 17-308
Cow position: chr15:21822061-21821784 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 17-309
Cow position: chr15:225934-225660 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 268, 25

Conread position: 18-307
Cow position: chr15:286342-286622 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 13

Conread position: 19-306
Cow position: chr15:10457161-10456873 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 188

Conread position: 19-310
Cow position: chr15:41625035-41624744 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 97

Conread position: 20-274
Cow position: chr15:18776905-18776642 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 21-256
Cow position: chr15:12045672-12045446 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 21-272
Cow position: chr15:48095225-48095467 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 166, 86

Conread position: 21-308
Cow position: chr15:7429835-7430118 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 209, 86

Conread position: 21-309
Cow position: chr15:608012-608287 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 7

Conread position: 21-309
Cow position: chr15:27900634-27900366 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 255, 16

Conread position: 21-309
Cow position: chr15:40415794-40415496 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 10

Conread position: 21-310
Cow position: chr15:2968203-2968481 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 21-310
Cow position: chr15:5409022-5408761 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 21-310
Cow position: chr15:19554059-19553779 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 89

Conread position: 21-310
Cow position: chr15:20459444-20459161 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 96

Conread position: 21-310
Cow position: chr15:21893651-21893925 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 7

Conread position: 21-310
Cow position: chr15:39405612-39405881 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 184, 21

Conread position: 22-215
Cow position: chr15:36714159-36713962 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 116, 10

Conread position: 22-257
Cow position: chr15:18763171-18762947 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 96

Conread position: 22-310
Cow position: chr15:22553672-22553395 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 88

Conread position: 22-310
Cow position: chr15:36635901-36636183 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 179, 6

Conread position: 23-253
Cow position: chr15:29793329-29793105 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 23-299
Cow position: chr15:33976838-33976556 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 51

Conread position: 24-266
Cow position: chr15:26896826-26896594 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 24-277
Cow position: chr15:22444113-22443876 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 24-298
Cow position: chr15:28924889-28924621 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 18

Conread position: 24-304
Cow position: chr15:36435071-36435342 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 87

Conread position: 24-306
Cow position: chr15:42789300-42789008 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 85, 280

Conread position: 24-308
Cow position: chr15:24616440-24616713 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 229, 6

Conread position: 24-308
Cow position: chr15:41528096-41527835 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 59

Conread position: 25-185
Cow position: chr15:45613990-45613833 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 25-265
Cow position: chr15:25208884-25208657 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 25-273
Cow position: chr15:36849039-36849290 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 199, 33

Conread position: 27-295
Cow position: chr15:31637170-31637432 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 82

Conread position: 27-309
Cow position: chr15:22136542-22136828 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 80, 203

Conread position: 27-310
Cow position: chr15:8665732-8665449 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 245, 93

Conread position: 28-255
Cow position: chr15:23913184-23912961 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 89

Conread position: 28-308
Cow position: chr15:39373578-39373292 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 19

Conread position: 29-248
Cow position: chr15:25451878-25452093 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 29-271
Cow position: chr15:44671463-44671229 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 147, 43

Conread position: 29-282
Cow position: chr15:19186746-19186501 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 50

Conread position: 29-297
Cow position: chr15:5158248-5158507 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 255, 86

Conread position: 30-256
Cow position: chr15:4500577-4500796 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 217, 17

Conread position: 30-267
Cow position: chr15:4485026-4485256 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 30-310
Cow position: chr15:6427770-6427487 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 117

Conread position: 30-310
Cow position: chr15:29810001-29810262 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 75

Conread position: 30-310
Cow position: chr15:39599328-39599585 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 31-298
Cow position: chr15:26158719-26158465 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 260, 16

Conread position: 31-310
Cow position: chr15:4295641-4295909 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 258, 15

Conread position: 31-310
Cow position: chr15:50957934-50957657 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 96

Conread position: 32-222
Cow position: chr15:26127955-26127769 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 79

Conread position: 32-235
Cow position: chr15:21520022-21520221 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 77

Conread position: 32-257
Cow position: chr15:17124591-17124376 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 32-269
Cow position: chr15:36846307-36846073 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 116

Conread position: 32-274
Cow position: chr15:5535502-5535251 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 14

Conread position: 32-307
Cow position: chr15:4418523-4418262 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 84

Conread position: 32-308
Cow position: chr15:17353781-17353508 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 34

Conread position: 32-310
Cow position: chr15:2141441-2141150 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 21

Conread position: 32-310
Cow position: chr15:25571929-25571664 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 32-310
Cow position: chr15:25667345-25667079 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 32-310
Cow position: chr15:26919390-26919132 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 53

Conread position: 33-238
Cow position: chr15:35577073-35577276 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 76

Conread position: 33-256
Cow position: chr15:50350723-50350931 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 77

Conread position: 33-274
Cow position: chr15:29604841-29604591 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 14

Conread position: 33-306
Cow position: chr15:17870411-17870146 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 182, 73

Conread position: 33-310
Cow position: chr15:47042762-47042484 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 45, 63

Conread position: 34-237
Cow position: chr15:8623997-8624200 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 80, 8

Conread position: 34-256
Cow position: chr15:5072217-5071994 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 210

Conread position: 34-295
Cow position: chr15:50332857-50333110 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 34-308
Cow position: chr15:38883028-38883293 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 213, 24

Conread position: 34-309
Cow position: chr15:50660484-50660773 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 78, 0

Conread position: 34-310
Cow position: chr15:11996145-11995883 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 37-209
Cow position: chr15:12034810-12034641 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 72

Conread position: 37-218
Cow position: chr15:24124608-24124786 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 166, 72

Conread position: 37-238
Cow position: chr15:2931686-2931495 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 37-238
Cow position: chr15:10442626-10442427 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 37-240
Cow position: chr15:5964228-5964031 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 37-299
Cow position: chr15:23780186-23779939 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 37-307
Cow position: chr15:39286526-39286270 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 37-309
Cow position: chr15:5683022-5683283 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 88, 71

Conread position: 37-310
Cow position: chr15:6969875-6970132 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 254, 13

Conread position: 37-310
Cow position: chr15:43626349-43626611 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 83

Conread position: 38-241
Cow position: chr15:5522833-5523034 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 180, 71

Conread position: 38-307
Cow position: chr15:45584608-45584866 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 70, 0

Conread position: 38-308
Cow position: chr15:20950138-20950392 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 69

Conread position: 38-310
Cow position: chr15:21389306-21389025 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 8

Conread position: 38-310
Cow position: chr15:28047875-28047611 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 36

Conread position: 38-310
Cow position: chr15:30471093-30470826 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 244, 70

Conread position: 39-307
Cow position: chr15:16112281-16112542 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 41-309
Cow position: chr15:31929009-31928754 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 42-310
Cow position: chr15:17162068-17162334 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 36

Conread position: 42-310
Cow position: chr15:36793602-36793343 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 234, 28

Conread position: 42-310
Cow position: chr15:48851602-48851346 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 252, 10

Conread position: 44-227
Cow position: chr15:17227036-17226861 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 44-274
Cow position: chr15:23719611-23719374 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 44-309
Cow position: chr15:21803773-21803518 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 127, 64

Conread position: 44-310
Cow position: chr15:1330217-1329959 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 46-226
Cow position: chr15:43020746-43020568 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 46-228
Cow position: chr15:53116384-53116565 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 63

Conread position: 46-237
Cow position: chr15:8997184-8997370 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 100, 75

Conread position: 46-241
Cow position: chr15:7307233-7307419 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 46-251
Cow position: chr15:19758940-19759147 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 46-262
Cow position: chr15:8642002-8642214 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 32, 62

Conread position: 46-272
Cow position: chr15:39474041-39473828 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 46-279
Cow position: chr15:11658689-11658458 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 104

Conread position: 46-283
Cow position: chr15:9978997-9979219 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 235, 33

Conread position: 46-283
Cow position: chr15:29541759-29541994 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 107, 0

Conread position: 46-306
Cow position: chr15:10335627-10335896 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 166

Conread position: 46-307
Cow position: chr15:8549604-8549343 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 68, 55

Conread position: 46-309
Cow position: chr15:16667604-16667356 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 219, 69

Conread position: 46-310
Cow position: chr15:662570-662325 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 46-310
Cow position: chr15:17233080-17233335 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 46-310
Cow position: chr15:23572795-23572541 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 251, 63

Conread position: 47-215
Cow position: chr15:6103190-6103023 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 62

Conread position: 47-285
Cow position: chr15:7751019-7750791 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 212, 56

Conread position: 47-307
Cow position: chr15:32324313-32324064 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 237, 68

Conread position: 48-310
Cow position: chr15:45530-45273 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 158, 38

Conread position: 48-310
Cow position: chr15:85350-85107 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 49-308
Cow position: chr15:4138031-4138274 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 205, 66

Conread position: 50-218
Cow position: chr15:49924935-49925103 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 87

Conread position: 50-308
Cow position: chr15:50341016-50341262 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 226, 21

Conread position: 51-231
Cow position: chr15:23928000-23927816 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 72

Conread position: 56-233
Cow position: chr15:5657721-5657902 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 56-282
Cow position: chr15:9465578-9465794 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 56-283
Cow position: chr15:38652699-38652484 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 56-288
Cow position: chr15:915947-915718 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 219, 41

Conread position: 57-307
Cow position: chr15:38837649-38837888 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 58-283
Cow position: chr15:23275439-23275662 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 215, 52

Conread position: 58-310
Cow position: chr15:10608403-10608162 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 59-273
Cow position: chr15:1284168-1284380 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 70

Conread position: 60-309
Cow position: chr15:34284502-34284268 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 123, 49

Conread position: 62-309
Cow position: chr15:38935314-38935550 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 64-283
Cow position: chr15:24031109-24031318 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 52

Conread position: 74-298
Cow position: chr15:39520079-39520301 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 197, 41

Conread position: 79-310
Cow position: chr15:31024903-31025135 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 171

Conread position: 82-308
Cow position: chr15:39621260-39621482 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 28

Conread position: 117-303
Cow position: chr15:37204998-37205182 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 161

Conread position: 124-274
Cow position: chr15:6129004-6128857 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 126
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 44

Conread position: 124-302
Cow position: chr15:14261298-14261124 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 105, 0

Conread position: 124-302
Cow position: chr15:41000110-40999940 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 124-309
Cow position: chr15:35441119-35440933 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 153
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 152, 97

Conread position: 124-309
Cow position: chr15:52454390-52454575 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 154

Conread position: 124-310
Cow position: chr15:14176540-14176356 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 152, 0

Conread position: 125-236
Cow position: chr15:16911702-16911589 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 127-275
Cow position: chr15:6037491-6037345 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 127-290
Cow position: chr15:16616153-16616308 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 95

Conread position: 127-298
Cow position: chr15:40368252-40368424 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 127-309
Cow position: chr15:2953172-2952983 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 149, 0

Conread position: 128-309
Cow position: chr15:26912109-26911934 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 129-235
Cow position: chr15:40562490-40562384 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 129-310
Cow position: chr15:795058-794871 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 129-310
Cow position: chr15:17100746-17100567 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 86

Conread position: 135-234
Cow position: chr15:12693498-12693597 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 135-257
Cow position: chr15:44853214-44853336 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 135-267
Cow position: chr15:12332443-12332576 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 135-298
Cow position: chr15:39316872-39316709 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 157, 141

Conread position: 135-299
Cow position: chr15:30981909-30982073 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 86

Conread position: 135-304
Cow position: chr15:32977877-32977707 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 157

Conread position: 135-306
Cow position: chr15:44280072-44280242 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 141, 0

Conread position: 135-309
Cow position: chr15:31042838-31043012 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 25

Conread position: 135-309
Cow position: chr15:35945500-35945671 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 135-310
Cow position: chr15:5235027-5234858 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 91, 0

Conread position: 135-310
Cow position: chr15:9497530-9497356 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 155, 0

Conread position: 135-310
Cow position: chr15:13554324-13554497 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 15, 0

Conread position: 135-310
Cow position: chr15:16583720-16583554 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 135-310
Cow position: chr15:31560419-31560253 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 83

Conread position: 135-310
Cow position: chr15:38827354-38827181 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 0

Conread position: 136-267
Cow position: chr15:3690321-3690452 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 136-310
Cow position: chr15:5717684-5717856 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 36

Conread position: 136-310
Cow position: chr15:12870893-12870721 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 137-282
Cow position: chr15:24629393-24629248 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 137-305
Cow position: chr15:36388263-36388431 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 137-307
Cow position: chr15:9781443-9781606 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 138, 88

Conread position: 137-309
Cow position: chr15:35205180-35205006 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 96, 16

Conread position: 137-310
Cow position: chr15:16928122-16927953 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 148, 0

Conread position: 137-310
Cow position: chr15:27973245-27973074 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 138-308
Cow position: chr15:1804365-1804194 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 128

Conread position: 138-309
Cow position: chr15:9107008-9107178 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 138-309
Cow position: chr15:34139954-34140128 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 156

Conread position: 138-309
Cow position: chr15:41418856-41418689 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 69

Conread position: 139-265
Cow position: chr15:52339659-52339532 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 0

Conread position: 140-274
Cow position: chr15:48590266-48590136 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 141-298
Cow position: chr15:4178968-4178811 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 143-305
Cow position: chr15:39326539-39326376 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 113

Conread position: 143-310
Cow position: chr15:20422800-20422636 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 138, 86

Conread position: 149-310
Cow position: chr15:20351816-20351974 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 127, 0

Conread position: 150-305
Cow position: chr15:23768272-23768120 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 0

Conread position: 153-308
Cow position: chr15:50322582-50322737 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 156-309
Cow position: chr15:25322757-25322605 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 130, 134

Conread position: 164-294
Cow position: chr15:38845900-38846029 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 112, 0

Conread position: 170-309
Cow position: chr15:12359039-12359178 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 111

Conread position: 187-310
Cow position: chr15:41620168-41620047 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.