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Cow genome map

           
Conread name:
           
rpigcf0_002703.y1
        

               
Conread position:
               
9-222
               

               
Cow position:
               
chr19:49683646-49683844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr19:36845464-36845185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
282, 23
               

               
Conread position:
               
9-309
               

               
Cow position:
               
chr19:54915455-54915757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 7
               

               
Conread position:
               
9-310
               

               
Cow position:
               
chr19:11191403-11191682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
14-270
               

               
Cow position:
               
chr19:11866091-11866334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
14-283
               

               
Cow position:
               
chr19:38664098-38664359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 34
               

               
Conread position:
               
14-310
               

               
Cow position:
               
chr19:55590453-55590164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr19:3110096-3109884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
15-234
               

               
Cow position:
               
chr19:17796124-17795905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
97, 111
               

               
Conread position:
               
15-309
               

               
Cow position:
               
chr19:39758735-39758456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
257, 32
               

               
Conread position:
               
16-303
               

               
Cow position:
               
chr19:12698530-12698258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
274, 31
               

               
Conread position:
               
16-309
               

               
Cow position:
               
chr19:12747563-12747840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
275, 59
               

               
Conread position:
               
16-310
               

               
Cow position:
               
chr19:30227734-30227455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
16-310
               

               
Cow position:
               
chr19:38411082-38410803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
190, 26
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr19:41089407-41089619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
17-309
               

               
Cow position:
               
chr19:28924978-28924694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
17-310
               

               
Cow position:
               
chr19:34757779-34758065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
17-310
               

               
Cow position:
               
chr19:46094413-46094705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
19-271
               

               
Cow position:
               
chr19:14581567-14581335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr19:18921013-18921287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
19-283
               

               
Cow position:
               
chr19:30007394-30007153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr19:44056-43783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
254, 90
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr19:44572298-44572088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
21-237
               

               
Cow position:
               
chr19:21044586-21044359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
21-246
               

               
Cow position:
               
chr19:12760892-12761106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
21-269
               

               
Cow position:
               
chr19:8185411-8185177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr19:26167708-26167957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
21-306
               

               
Cow position:
               
chr19:13121078-13121340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
255, 21
               

               
Conread position:
               
21-310
               

               
Cow position:
               
chr19:23304277-23304556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
22-309
               

               
Cow position:
               
chr19:37466853-37467124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
22-310
               

               
Cow position:
               
chr19:41024429-41024157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 66
               

               
Conread position:
               
23-310
               

               
Cow position:
               
chr19:53658103-53657825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
24-253
               

               
Cow position:
               
chr19:1897756-1897962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
24-299
               

               
Cow position:
               
chr19:8128513-8128251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
24-309
               

               
Cow position:
               
chr19:25382478-25382751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr19:729543-729810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
250, 13
               

               
Conread position:
               
25-224
               

               
Cow position:
               
chr19:26269020-26269215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr19:52621643-52621846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr19:54004580-54004790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
95, 102
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr19:7147851-7148100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
25-310
               

               
Cow position:
               
chr19:11424077-11424379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 202
               

               
Conread position:
               
27-306
               

               
Cow position:
               
chr19:25035702-25035418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
27-310
               

               
Cow position:
               
chr19:39802101-39801812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
27-310
               

               
Cow position:
               
chr19:47453633-47453364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
263, 26
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr19:33610092-33609906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
28-249
               

               
Cow position:
               
chr19:53644972-53645194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
28-257
               

               
Cow position:
               
chr19:10574064-10574283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr19:53371692-53371961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
28-309
               

               
Cow position:
               
chr19:47859112-47859379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
28-310
               

               
Cow position:
               
chr19:39361356-39361077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr19:21605339-21605131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
29-304
               

               
Cow position:
               
chr19:11194563-11194819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr19:79869-79683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
30-309
               

               
Cow position:
               
chr19:21199352-21199072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
30-310
               

               
Cow position:
               
chr19:42763414-42763133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
31-238
               

               
Cow position:
               
chr19:5521960-5522150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
31-282
               

               
Cow position:
               
chr19:9390942-9391189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
31-308
               

               
Cow position:
               
chr19:43058737-43058473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
31-310
               

               
Cow position:
               
chr19:52185558-52185836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
198, 72
               

               
Conread position:
               
32-252
               

               
Cow position:
               
chr19:11816523-11816732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
32-283
               

               
Cow position:
               
chr19:37075506-37075757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 150
               

               
Conread position:
               
32-284
               

               
Cow position:
               
chr19:39622587-39622829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
32-302
               

               
Cow position:
               
chr19:13316212-13316474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
32-307
               

               
Cow position:
               
chr19:51194441-51194180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr19:52750561-52750823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr19:55957369-55957639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
244, 88
               

               
Conread position:
               
33-231
               

               
Cow position:
               
chr19:46919329-46919136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
33-238
               

               
Cow position:
               
chr19:2327217-2327430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
33-238
               

               
Cow position:
               
chr19:41718765-41718959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
33-255
               

               
Cow position:
               
chr19:38717137-38717360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
33-274
               

               
Cow position:
               
chr19:35246142-35245911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
33-290
               

               
Cow position:
               
chr19:53404168-53403911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
199, 45
               

               
Conread position:
               
33-307
               

               
Cow position:
               
chr19:17355056-17354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-239
               

               
Cow position:
               
chr19:29972039-29972253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
35-310
               

               
Cow position:
               
chr19:53542693-53542956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
225, 74
               

               
Conread position:
               
36-224
               

               
Cow position:
               
chr19:13765952-13766141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
37-235
               

               
Cow position:
               
chr19:53189657-53189847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
37-250
               

               
Cow position:
               
chr19:15075998-15076207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
37-254
               

               
Cow position:
               
chr19:39585911-39586117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
37-254
               

               
Cow position:
               
chr19:52356445-52356241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
37-271
               

               
Cow position:
               
chr19:4587535-4587766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
37-284
               

               
Cow position:
               
chr19:23831543-23831310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
37-301
               

               
Cow position:
               
chr19:28810123-28810376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
159, 76
               

               
Conread position:
               
37-309
               

               
Cow position:
               
chr19:42236234-42235962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
37-310
               

               
Cow position:
               
chr19:3497754-3498019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
37-310
               

               
Cow position:
               
chr19:7637042-7637304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
239, 72
               

               
Conread position:
               
38-223
               

               
Cow position:
               
chr19:2358270-2358091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
38-252
               

               
Cow position:
               
chr19:48723225-48723013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
38-274
               

               
Cow position:
               
chr19:5406693-5406469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
143, 49
               

               
Conread position:
               
38-307
               

               
Cow position:
               
chr19:15887124-15887387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
249, 59
               

               
Conread position:
               
38-310
               

               
Cow position:
               
chr19:36060146-36059865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
39-216
               

               
Cow position:
               
chr19:22167015-22167191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr19:4485957-4486143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
39-281
               

               
Cow position:
               
chr19:54943158-54942932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
39-310
               

               
Cow position:
               
chr19:3811831-3812082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
228, 69
               

               
Conread position:
               
41-310
               

               
Cow position:
               
chr19:24137454-24137196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
42-257
               

               
Cow position:
               
chr19:29627194-29627403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
42-282
               

               
Cow position:
               
chr19:51396981-51397235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
44-223
               

               
Cow position:
               
chr19:51637231-51637060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
44-248
               

               
Cow position:
               
chr19:25927224-25927414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
171, 65
               

               
Conread position:
               
44-309
               

               
Cow position:
               
chr19:7404170-7404443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 250
               

               
Conread position:
               
44-309
               

               
Cow position:
               
chr19:22449731-22449995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
44-309
               

               
Cow position:
               
chr19:43373234-43372979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
44-310
               

               
Cow position:
               
chr19:6079164-6079425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
45-237
               

               
Cow position:
               
chr19:35623578-35623400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
46-211
               

               
Cow position:
               
chr19:28928814-28928981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
46-216
               

               
Cow position:
               
chr19:33117050-33116879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
46-227
               

               
Cow position:
               
chr19:14421744-14421920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
46-240
               

               
Cow position:
               
chr19:41854451-41854639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
46-242
               

               
Cow position:
               
chr19:33307768-33307582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
46-253
               

               
Cow position:
               
chr19:31763680-31763481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
141, 41
               

               
Conread position:
               
46-261
               

               
Cow position:
               
chr19:19562009-19561778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
46-297
               

               
Cow position:
               
chr19:14253819-14253581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
46-309
               

               
Cow position:
               
chr19:32505924-32506186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
46-309
               

               
Cow position:
               
chr19:51620993-51621248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
209, 63
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr19:10081272-10081002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr19:12601986-12601746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
229, 39
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr19:38339791-38340045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
47-238
               

               
Cow position:
               
chr19:42776617-42776437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
47-239
               

               
Cow position:
               
chr19:12093545-12093363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
47-307
               

               
Cow position:
               
chr19:21335389-21335669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
48-239
               

               
Cow position:
               
chr19:29139387-29139206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
48-310
               

               
Cow position:
               
chr19:36097406-36097157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr19:4459262-4459507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr19:6344262-6344003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 59
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr19:14348206-14347947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
51-310
               

               
Cow position:
               
chr19:6687818-6688063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
56-251
               

               
Cow position:
               
chr19:27180066-27180257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
56-283
               

               
Cow position:
               
chr19:2965725-2965503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
56-284
               

               
Cow position:
               
chr19:41585146-41584928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
56-310
               

               
Cow position:
               
chr19:21378292-21378537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
227, 48
               

               
Conread position:
               
58-225
               

               
Cow position:
               
chr19:20331648-20331818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
59-309
               

               
Cow position:
               
chr19:21817137-21816899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
232, 56
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr19:1664020-1664258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
218, 42
               

               
Conread position:
               
82-310
               

               
Cow position:
               
chr19:18786161-18786389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
105-252
               

               
Cow position:
               
chr19:52568336-52568484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
109-310
               

               
Cow position:
               
chr19:10676727-10676924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
120-310
               

               
Cow position:
               
chr19:25526407-25526214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
122, 128
               

               
Conread position:
               
120-310
               

               
Cow position:
               
chr19:30471229-30471418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
123-310
               

               
Cow position:
               
chr19:30910265-30910077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
124-261
               

               
Cow position:
               
chr19:31998154-31998291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-307
               

               
Cow position:
               
chr19:25652640-25652817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
124-309
               

               
Cow position:
               
chr19:43292175-43291987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr19:7884698-7884513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr19:39254326-39254517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr19:42517136-42517323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
125-274
               

               
Cow position:
               
chr19:51774555-51774712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
125-283
               

               
Cow position:
               
chr19:30241816-30241659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
125-309
               

               
Cow position:
               
chr19:39648958-39649140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
127-249
               

               
Cow position:
               
chr19:33931741-33931864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
127-270
               

               
Cow position:
               
chr19:6854166-6854306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
129-292
               

               
Cow position:
               
chr19:35233546-35233702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
129-310
               

               
Cow position:
               
chr19:41695546-41695731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
130-249
               

               
Cow position:
               
chr19:29115856-29115740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
131-283
               

               
Cow position:
               
chr19:26975956-26976106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
131-308
               

               
Cow position:
               
chr19:25410735-25410908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
150, 98
               

               
Conread position:
               
131-308
               

               
Cow position:
               
chr19:30886508-30886332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr19:4503329-4503155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
151, 17
               

               
Conread position:
               
134-308
               

               
Cow position:
               
chr19:11443100-11442919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chr19:51185532-51185359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chr19:56063320-56063498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
135-241
               

               
Cow position:
               
chr19:21723600-21723706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
135-251
               

               
Cow position:
               
chr19:2042193-2042081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
135-253
               

               
Cow position:
               
chr19:42745998-42746118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
135-255
               

               
Cow position:
               
chr19:55175372-55175492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-282
               

               
Cow position:
               
chr19:33241398-33241544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
135-284
               

               
Cow position:
               
chr19:15362588-15362743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
135-306
               

               
Cow position:
               
chr19:35322028-35322198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
149, 90
               

               
Conread position:
               
135-307
               

               
Cow position:
               
chr19:10242685-10242519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr19:15092028-15092199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
154, 86
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr19:33237282-33237113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr19:19919354-19919527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr19:22134044-22134210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr19:22153740-22153918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 92
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr19:23222738-23222570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 84
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr19:34619921-34620096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr19:38500272-38500098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
138, 84
               

               
Conread position:
               
136-253
               

               
Cow position:
               
chr19:26869970-26869855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chr19:2223996-2224165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chr19:39781627-39781452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
154, 139
               

               
Conread position:
               
137-274
               

               
Cow position:
               
chr19:7675340-7675203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr19:23088090-23087930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-309
               

               
Cow position:
               
chr19:34819080-34819255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
137-310
               

               
Cow position:
               
chr19:10970989-10971161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
137-310
               

               
Cow position:
               
chr19:20665964-20666137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 154
               

               
Conread position:
               
138-275
               

               
Cow position:
               
chr19:9583393-9583256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-290
               

               
Cow position:
               
chr19:14563476-14563324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-295
               

               
Cow position:
               
chr19:53378807-53378650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 139
               

               
Conread position:
               
138-296
               

               
Cow position:
               
chr19:46713741-46713588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chr19:36245389-36245552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
138-309
               

               
Cow position:
               
chr19:15862943-15863107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chr19:40450123-40449950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
143, 78
               

               
Conread position:
               
139-303
               

               
Cow position:
               
chr19:33469125-33468960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
139-309
               

               
Cow position:
               
chr19:1978285-1978103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chr19:47986962-47986790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
141-251
               

               
Cow position:
               
chr19:39587145-39587252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chr19:268457-268288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 147
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chr19:33290586-33290419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chr19:35540401-35540231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
142-280
               

               
Cow position:
               
chr19:2207691-2207822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
149-283
               

               
Cow position:
               
chr19:53497501-53497369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
150-245
               

               
Cow position:
               
chr19:5754693-5754788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
153-254
               

               
Cow position:
               
chr19:10570557-10570658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
153-310
               

               
Cow position:
               
chr19:31595391-31595234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
168-310
               

               
Cow position:
               
chr19:4328978-4329115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
168-310
               

               
Cow position:
               
chr19:31536202-31536060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
168-310
               

               
Cow position:
               
chr19:51400939-51401078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
170-310
               

               
Cow position:
               
chr19:2734523-2734385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
187-295
               

               
Cow position:
               
chr19:55708914-55709023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
188-310
               

               
Cow position:
               
chr19:29070664-29070786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.