Cow genome map

Conread name: rpigcf0_002703.y1

Conread position: 3-267
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 223, 14

Conread position: 9-251
Cow position:
Alignm length: 246
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 70

Conread position: 13-310
Cow position:
Alignm length: 306
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 263, 29

Conread position: 15-191
Cow position:
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 65

Conread position: 15-224
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 77

Conread position: 15-224
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 38

Conread position: 15-235
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 9

Conread position: 16-252
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 26

Conread position: 16-273
Cow position:
Alignm length: 272
Alignm identity: 201
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 93, 44

Conread position: 16-284
Cow position:
Alignm length: 269
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 16-308
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 12, 28

Conread position: 17-138
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 20

Conread position: 17-218
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 18-310
Cow position:
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 25

Conread position: 19-310
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 56

Conread position: 20-270
Cow position:
Alignm length: 255
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 94, 53

Conread position: 20-289
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 256, 27

Conread position: 20-310
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 219

Conread position: 21-237
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 26, 123

Conread position: 21-251
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 21-251
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 21-257
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 21-308
Cow position:
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 214, 87

Conread position: 22-198
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 22-309
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 21

Conread position: 23-240
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 147, 92

Conread position: 23-257
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 43, 19

Conread position: 24-301
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 162, 18

Conread position: 24-310
Cow position:
Alignm length: 287
Alignm identity: 193
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 25-307
Cow position:
Alignm length: 285
Alignm identity: 186
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 28

Conread position: 25-308
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 25-310
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 82

Conread position: 27-237
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 27-272
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 218, 81

Conread position: 27-295
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 28-257
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 28-274
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 28-310
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 19

Conread position: 32-272
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 0

Conread position: 33-274
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 86

Conread position: 33-274
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 33-310
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 33-310
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 0

Conread position: 34-235
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 40

Conread position: 34-274
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 63

Conread position: 34-286
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 208, 74

Conread position: 34-309
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 249, 60

Conread position: 34-310
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 36-298
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 37-231
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 20

Conread position: 37-306
Cow position:
Alignm length: 273
Alignm identity: 179
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 37-308
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 72

Conread position: 37-308
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 72

Conread position: 37-309
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 38-294
Cow position:
Alignm length: 260
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 235, 70

Conread position: 38-306
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 36

Conread position: 38-310
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 258, 71

Conread position: 39-257
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 70

Conread position: 39-274
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 39-310
Cow position:
Alignm length: 277
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 182

Conread position: 39-310
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 69, 146

Conread position: 41-279
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 43-309
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 41, 45

Conread position: 44-229
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 184

Conread position: 44-283
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 44-289
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 44

Conread position: 44-309
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 30

Conread position: 45-309
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 264

Conread position: 46-233
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 46-270
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 46-274
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 46-306
Cow position:
Alignm length: 267
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 46-309
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 145, 61

Conread position: 46-310
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 242, 69

Conread position: 46-310
Cow position:
Alignm length: 265
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 46-310
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 63

Conread position: 46-310
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 46-310
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 70

Conread position: 46-310
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 230, 61

Conread position: 47-271
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 47-283
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 47-310
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 62

Conread position: 48-306
Cow position:
Alignm length: 271
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 50-284
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 231, 58

Conread position: 50-294
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 56-251
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 59, 0

Conread position: 56-284
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 109

Conread position: 56-308
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 154, 53

Conread position: 56-309
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 92

Conread position: 59-310
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 136, 50

Conread position: 71-237
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 41

Conread position: 118-310
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 102, 75

Conread position: 121-297
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 167, 0

Conread position: 122-310
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 165, 93

Conread position: 124-283
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 152, 0

Conread position: 124-283
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 58

Conread position: 124-310
Cow position:
Alignm length: 189
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 126, 40

Conread position: 124-310
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 125-308
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 134, 152

Conread position: 126-291
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 127-295
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 128-303
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 138, 54

Conread position: 129-273
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 103

Conread position: 129-303
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 161, 0

Conread position: 129-309
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 51

Conread position: 131-237
Cow position:
Alignm length: 108
Alignm identity: 87
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 40, 58

Conread position: 131-274
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 131-310
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 118, 89

Conread position: 132-303
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 133-309
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 143, 159

Conread position: 133-309
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 134-240
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 40, 0

Conread position: 135-286
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 141, 0

Conread position: 135-309
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 30

Conread position: 135-310
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 148, 94

Conread position: 135-310
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 135-310
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 149, 70

Conread position: 135-310
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 149, 123

Conread position: 136-239
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 73, 0

Conread position: 136-285
Cow position:
Alignm length: 154
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 78, 144

Conread position: 136-308
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 163

Conread position: 136-309
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 136-310
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 133, 145

Conread position: 137-299
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 46

Conread position: 138-240
Cow position:
Alignm length: 103
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 138-283
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 141-274
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 48

Conread position: 141-305
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 145-303
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 150-308
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 135, 79

Conread position: 150-310
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 0

Conread position: 154-309
Cow position:
Alignm length: 156
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 157-309
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 59

Conread position: 168-309
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 20

Conread position: 171-309
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 114, 43

Show alignments to all cow chromosomes.