Cow genome map
| Conread name: | rpigcf0_002703.y1 |
| Conread position: | 6-237 |
| Cow position: | chr27:20266509-20266286 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 6 |
| Conread position: | 9-310 |
| Cow position: | chr27:11561502-11561787 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 11-308 |
| Cow position: | chr27:11435600-11435313 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 13-309 |
| Cow position: | chr27:7649865-7649574 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 80 |
| Conread position: | 14-285 |
| Cow position: | chr27:26323169-26323431 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 14-304 |
| Cow position: | chr27:24303674-24303946 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 15-255 |
| Cow position: | chr27:27255696-27255945 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 15-306 |
| Cow position: | chr27:23594050-23594329 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 275, 22 |
| Conread position: | 15-310 |
| Cow position: | chr27:30869023-30868729 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 16-274 |
| Cow position: | chr27:7935419-7935180 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 195, 8 |
| Conread position: | 16-308 |
| Cow position: | chr27:16704984-16705261 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 16-309 |
| Cow position: | chr27:15925073-15925351 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 17-310 |
| Cow position: | chr27:19546791-19546500 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 17-310 |
| Cow position: | chr27:28896610-28896891 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 164, 90 |
| Conread position: | 20-251 |
| Cow position: | chr27:13801541-13801762 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 20-274 |
| Cow position: | chr27:31170336-31170088 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 20-292 |
| Cow position: | chr27:29319140-29319404 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 20-310 |
| Cow position: | chr27:16088528-16088820 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 21-227 |
| Cow position: | chr27:23232649-23232845 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 32 |
| Conread position: | 21-238 |
| Cow position: | chr27:20485781-20485997 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 21-241 |
| Cow position: | chr27:24240083-24240302 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 21-247 |
| Cow position: | chr27:28541398-28541163 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 21-258 |
| Cow position: | chr27:18791778-18791549 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 165, 88 |
| Conread position: | 21-285 |
| Cow position: | chr27:29991723-29991460 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 21-295 |
| Cow position: | chr27:4720390-4720118 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 52 |
| Conread position: | 21-295 |
| Cow position: | chr27:27438772-27438510 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 210, 94 |
| Conread position: | 24-308 |
| Cow position: | chr27:19500497-19500226 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 24-310 |
| Cow position: | chr27:6924822-6925100 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 252, 18 |
| Conread position: | 24-310 |
| Cow position: | chr27:29593894-29593617 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 25-237 |
| Cow position: | chr27:18752589-18752795 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 25-283 |
| Cow position: | chr27:27740554-27740307 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 25-284 |
| Cow position: | chr27:7731534-7731271 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 27-309 |
| Cow position: | chr27:26413535-26413243 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 28-249 |
| Cow position: | chr27:12284736-12284945 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 28-253 |
| Cow position: | chr27:29236301-29236519 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 215, 43 |
| Conread position: | 28-304 |
| Cow position: | chr27:16965318-16965579 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 178, 79 |
| Conread position: | 28-308 |
| Cow position: | chr27:20336832-20337110 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 28-310 |
| Cow position: | chr27:2592280-2592559 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 81 |
| Conread position: | 28-310 |
| Cow position: | chr27:30914752-30915018 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 29-310 |
| Cow position: | chr27:7212986-7212700 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 30-242 |
| Cow position: | chr27:20324885-20325088 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 30-310 |
| Cow position: | chr27:28518035-28518306 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 31-283 |
| Cow position: | chr27:236998-237253 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 102, 166 |
| Conread position: | 32-215 |
| Cow position: | chr27:25000220-25000043 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 32-238 |
| Cow position: | chr27:11940498-11940287 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 15, 203 |
| Conread position: | 32-310 |
| Cow position: | chr27:18767335-18767051 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 76, 141 |
| Conread position: | 32-310 |
| Cow position: | chr27:20584719-20584446 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 15 |
| Conread position: | 33-308 |
| Cow position: | chr27:19932814-19933074 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 33-309 |
| Cow position: | chr27:26112170-26111900 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 209, 76 |
| Conread position: | 33-310 |
| Cow position: | chr27:30988524-30988807 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 34-307 |
| Cow position: | chr27:30872308-30872051 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 34-309 |
| Cow position: | chr27:10979609-10979873 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 252, 81 |
| Conread position: | 35-310 |
| Cow position: | chr27:212701-212975 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 174, 74 |
| Conread position: | 37-215 |
| Cow position: | chr27:18749168-18748992 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 89 |
| Conread position: | 37-224 |
| Cow position: | chr27:31183325-31183502 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 37-253 |
| Cow position: | chr27:23527068-23527268 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 37-274 |
| Cow position: | chr27:28290594-28290831 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 192 |
| Conread position: | 37-283 |
| Cow position: | chr27:16512414-16512186 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 37-285 |
| Cow position: | chr27:23863331-23863576 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 9 |
| Conread position: | 37-310 |
| Cow position: | chr27:591016-590749 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 251, 16 |
| Conread position: | 38-310 |
| Cow position: | chr27:18923106-18922819 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 76, 191 |
| Conread position: | 38-310 |
| Cow position: | chr27:23510728-23511001 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 140 |
| Conread position: | 39-258 |
| Cow position: | chr27:22153593-22153819 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 39-262 |
| Cow position: | chr27:19717652-19717879 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 39-303 |
| Cow position: | chr27:23545584-23545319 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 172, 53 |
| Conread position: | 41-310 |
| Cow position: | chr27:10307547-10307291 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 42-240 |
| Cow position: | chr27:20048394-20048576 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 42-241 |
| Cow position: | chr27:22267977-22268171 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 42-307 |
| Cow position: | chr27:15867150-15867405 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 184, 53 |
| Conread position: | 42-310 |
| Cow position: | chr27:20354357-20354595 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 42-310 |
| Cow position: | chr27:24228047-24227783 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 175, 42 |
| Conread position: | 45-257 |
| Cow position: | chr27:22489033-22489236 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 46-238 |
| Cow position: | chr27:27531885-27532078 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 80 |
| Conread position: | 46-240 |
| Cow position: | chr27:29249347-29249534 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 46-249 |
| Cow position: | chr27:29308104-29308294 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 46-267 |
| Cow position: | chr27:30407286-30407068 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 46-295 |
| Cow position: | chr27:27641275-27641016 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 34, 129 |
| Conread position: | 46-308 |
| Cow position: | chr27:15343542-15343271 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 46-308 |
| Cow position: | chr27:24331475-24331730 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 46-308 |
| Cow position: | chr27:26794023-26793778 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 46-310 |
| Cow position: | chr27:11480877-11480620 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 230, 56 |
| Conread position: | 46-310 |
| Cow position: | chr27:17331253-17331510 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 246, 63 |
| Conread position: | 46-310 |
| Cow position: | chr27:18558119-18558370 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 237, 57 |
| Conread position: | 46-310 |
| Cow position: | chr27:19508773-19509026 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 227, 61 |
| Conread position: | 46-310 |
| Cow position: | chr27:28467708-28467439 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 123 |
| Conread position: | 47-251 |
| Cow position: | chr27:26118259-26118453 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 47-278 |
| Cow position: | chr27:13903167-13902937 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 47-283 |
| Cow position: | chr27:29693229-29693462 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 47-308 |
| Cow position: | chr27:10323606-10323846 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 47-310 |
| Cow position: | chr27:11982886-11982637 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 48-306 |
| Cow position: | chr27:20517415-20517666 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 48-309 |
| Cow position: | chr27:22602938-22603186 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 50-224 |
| Cow position: | chr27:29183461-29183290 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 51-250 |
| Cow position: | chr27:232317-232506 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 51-309 |
| Cow position: | chr27:2644332-2644081 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 51-310 |
| Cow position: | chr27:30764799-30765047 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 225, 64 |
| Conread position: | 53-271 |
| Cow position: | chr27:30489660-30489437 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 53-310 |
| Cow position: | chr27:6550227-6550468 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 56-273 |
| Cow position: | chr27:24731267-24731064 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 185, 52 |
| Conread position: | 56-304 |
| Cow position: | chr27:13318206-13317972 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 56-309 |
| Cow position: | chr27:26188598-26188840 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 220, 55 |
| Conread position: | 57-310 |
| Cow position: | chr27:19660700-19660946 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 219, 50 |
| Conread position: | 58-310 |
| Cow position: | chr27:22455020-22454767 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 223 |
| Conread position: | 58-310 |
| Cow position: | chr27:23890706-23890950 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 60-237 |
| Cow position: | chr27:23060341-23060174 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 61-238 |
| Cow position: | chr27:28039079-28038904 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 62-308 |
| Cow position: | chr27:16231163-16230927 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 64-285 |
| Cow position: | chr27:24709333-24709540 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 113-270 |
| Cow position: | chr27:14675200-14675043 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-307 |
| Cow position: | chr27:30582562-30582744 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 162, 42 |
| Conread position: | 124-309 |
| Cow position: | chr27:20497032-20497221 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 124-310 |
| Cow position: | chr27:20552957-20552759 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 125-240 |
| Cow position: | chr27:26909764-26909649 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 125-307 |
| Cow position: | chr27:1768796-1768612 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 113 |
| Conread position: | 127-310 |
| Cow position: | chr27:6541461-6541640 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 154, 139 |
| Conread position: | 127-310 |
| Cow position: | chr27:8942860-8942672 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 127-310 |
| Cow position: | chr27:14303568-14303745 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 127-310 |
| Cow position: | chr27:15865436-15865622 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 146, 167 |
| Conread position: | 127-310 |
| Cow position: | chr27:17397625-17397440 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 129-249 |
| Cow position: | chr27:16237458-16237578 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-298 |
| Cow position: | chr27:12246487-12246653 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 155, 11 |
| Conread position: | 130-307 |
| Cow position: | chr27:30354512-30354335 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 146, 161 |
| Conread position: | 132-257 |
| Cow position: | chr27:6162576-6162451 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-310 |
| Cow position: | chr27:26581604-26581425 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 146 |
| Conread position: | 133-310 |
| Cow position: | chr27:1637100-1636924 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 135-254 |
| Cow position: | chr27:20543559-20543676 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 135-274 |
| Cow position: | chr27:30908509-30908648 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 5, 61 |
| Conread position: | 135-275 |
| Cow position: | chr27:29388508-29388649 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 135-283 |
| Cow position: | chr27:22723857-22723709 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 5, 136 |
| Conread position: | 135-304 |
| Cow position: | chr27:23882530-23882372 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 135-304 |
| Cow position: | chr27:27673178-27673016 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 135-306 |
| Cow position: | chr27:6302630-6302455 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 141, 65 |
| Conread position: | 135-308 |
| Cow position: | chr27:1291011-1290841 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 163, 15 |
| Conread position: | 135-309 |
| Cow position: | chr27:4155836-4156012 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 135-309 |
| Cow position: | chr27:25276981-25277151 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 153, 15 |
| Conread position: | 135-309 |
| Cow position: | chr27:30359244-30359418 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 141, 154 |
| Conread position: | 135-310 |
| Cow position: | chr27:2957249-2957416 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 82 |
| Conread position: | 135-310 |
| Cow position: | chr27:4386224-4386050 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 135-310 |
| Cow position: | chr27:15643012-15643182 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 135-310 |
| Cow position: | chr27:17918476-17918304 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 135-310 |
| Cow position: | chr27:22423354-22423521 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 135-310 |
| Cow position: | chr27:22559986-22559813 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 141, 86 |
| Conread position: | 135-310 |
| Cow position: | chr27:27064602-27064428 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 136-276 |
| Cow position: | chr27:19755936-19756074 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 136-308 |
| Cow position: | chr27:28260697-28260528 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 136-308 |
| Cow position: | chr27:29380693-29380865 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 153, 92 |
| Conread position: | 136-310 |
| Cow position: | chr27:17472651-17472820 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 148, 65 |
| Conread position: | 136-310 |
| Cow position: | chr27:20812743-20812917 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-310 |
| Cow position: | chr27:27038999-27038827 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 140, 85 |
| Conread position: | 137-252 |
| Cow position: | chr27:27747626-27747511 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 137-307 |
| Cow position: | chr27:26347772-26347606 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 148, 26 |
| Conread position: | 137-308 |
| Cow position: | chr27:21453255-21453083 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 137-310 |
| Cow position: | chr27:26920073-26919892 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 138-279 |
| Cow position: | chr27:23216476-23216337 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 139-310 |
| Cow position: | chr27:26490067-26489894 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 137, 155 |
| Conread position: | 139-310 |
| Cow position: | chr27:28271309-28271140 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 139-310 |
| Cow position: | chr27:30261051-30260878 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 81, 146 |
| Conread position: | 141-291 |
| Cow position: | chr27:22245470-22245619 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 141-309 |
| Cow position: | chr27:10653528-10653696 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 143-310 |
| Cow position: | chr27:9169792-9169634 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 144, 22 |
| Conread position: | 144-298 |
| Cow position: | chr27:10992203-10992351 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 145-310 |
| Cow position: | chr27:18593120-18593280 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 149-296 |
| Cow position: | chr27:29841881-29841732 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 149-304 |
| Cow position: | chr27:23632451-23632600 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 153-306 |
| Cow position: | chr27:17646313-17646160 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-306 |
| Cow position: | chr27:21975925-21976058 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 186-310 |
| Cow position: | chr27:24999852-24999729 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
Show alignments to all cow chromosomes.