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Cow genome map

           
Conread name:
           
rpigcf0_002703.y1
        

               
Conread position:
               
3-308
               

               
Cow position:
               
chr5:61875822-61875515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 234
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr5:58519156-58519419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
10-284
               

               
Cow position:
               
chr5:39937375-39937112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr5:35246844-35247140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
11-254
               

               
Cow position:
               
chr5:20882355-20882598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
42, 6
               

               
Conread position:
               
11-299
               

               
Cow position:
               
chr5:16937776-16938040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
12-298
               

               
Cow position:
               
chr5:2827630-2827358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
14-275
               

               
Cow position:
               
chr5:46022805-46023060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
14-279
               

               
Cow position:
               
chr5:46129414-46129668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
14-309
               

               
Cow position:
               
chr5:50713495-50713799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
15-205
               

               
Cow position:
               
chr5:56624262-56624442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
15-309
               

               
Cow position:
               
chr5:4280698-4280420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
15-310
               

               
Cow position:
               
chr5:6443889-6444180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr5:20345789-20345584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
16-241
               

               
Cow position:
               
chr5:28881428-28881653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
16-283
               

               
Cow position:
               
chr5:60514773-60515031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
16-310
               

               
Cow position:
               
chr5:52108008-52108296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
17-241
               

               
Cow position:
               
chr5:42748687-42748469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
17-283
               

               
Cow position:
               
chr5:55965641-55965896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
17-310
               

               
Cow position:
               
chr5:20994838-20995124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
208, 64
               

               
Conread position:
               
17-310
               

               
Cow position:
               
chr5:60209898-60210173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
268, 7
               

               
Conread position:
               
18-283
               

               
Cow position:
               
chr5:57062275-57062532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
19-274
               

               
Cow position:
               
chr5:61049583-61049338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr5:2468962-2469210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
19-304
               

               
Cow position:
               
chr5:50723293-50723025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
19-310
               

               
Cow position:
               
chr5:33273946-33273661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
214, 89
               

               
Conread position:
               
19-310
               

               
Cow position:
               
chr5:50101130-50101407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
193, 25
               

               
Conread position:
               
20-267
               

               
Cow position:
               
chr5:12300159-12299924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
20-309
               

               
Cow position:
               
chr5:35969788-35969507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 89
               

               
Conread position:
               
20-309
               

               
Cow position:
               
chr5:44993791-44994070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr5:3772090-3771819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
256, 75
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr5:55966626-55966908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
21-211
               

               
Cow position:
               
chr5:24108812-24108991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr5:15770204-15770395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr5:59662810-59662999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
21-233
               

               
Cow position:
               
chr5:48819521-48819321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
21-240
               

               
Cow position:
               
chr5:48061862-48062077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr5:64843719-64843941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
21-252
               

               
Cow position:
               
chr5:49821678-49821456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
21-252
               

               
Cow position:
               
chr5:57744662-57744896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
21-253
               

               
Cow position:
               
chr5:38382529-38382772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
88, 145
               

               
Conread position:
               
21-267
               

               
Cow position:
               
chr5:36868983-36868750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
21-268
               

               
Cow position:
               
chr5:32976010-32975769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
197, 51
               

               
Conread position:
               
21-270
               

               
Cow position:
               
chr5:46512520-46512758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
21-279
               

               
Cow position:
               
chr5:56613314-56613563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
21-282
               

               
Cow position:
               
chr5:5760064-5760315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
21-309
               

               
Cow position:
               
chr5:51053400-51053678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
21-309
               

               
Cow position:
               
chr5:63987171-63987477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
21-310
               

               
Cow position:
               
chr5:44847778-44848049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
21-310
               

               
Cow position:
               
chr5:64591837-64592125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
22-308
               

               
Cow position:
               
chr5:44796493-44796759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 9
               

               
Conread position:
               
22-310
               

               
Cow position:
               
chr5:2309310-2309586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
23-240
               

               
Cow position:
               
chr5:44901764-44901549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
23-303
               

               
Cow position:
               
chr5:58555395-58555112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
24-256
               

               
Cow position:
               
chr5:13270773-13270993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
24-283
               

               
Cow position:
               
chr5:4226598-4226345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr5:63241222-63240949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
264, 13
               

               
Conread position:
               
24-309
               

               
Cow position:
               
chr5:58689-58962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
245, 7
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr5:18289361-18289101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
258, 18
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr5:18574425-18574144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
24-310
               

               
Cow position:
               
chr5:35208505-35208235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
25-238
               

               
Cow position:
               
chr5:19294277-19294484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 22
               

               
Conread position:
               
25-310
               

               
Cow position:
               
chr5:53855961-53855669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
26-273
               

               
Cow position:
               
chr5:26723710-26723455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
26-310
               

               
Cow position:
               
chr5:21829106-21828837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
264, 46
               

               
Conread position:
               
26-310
               

               
Cow position:
               
chr5:49685025-49685299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
27-310
               

               
Cow position:
               
chr5:11667943-11668213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
28-241
               

               
Cow position:
               
chr5:6876727-6876929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
28-308
               

               
Cow position:
               
chr5:54086798-54086516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
28-310
               

               
Cow position:
               
chr5:29828288-29828020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
214, 79
               

               
Conread position:
               
30-240
               

               
Cow position:
               
chr5:57303010-57302805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
31-272
               

               
Cow position:
               
chr5:5016657-5016437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
31-310
               

               
Cow position:
               
chr5:65776140-65776411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
32-219
               

               
Cow position:
               
chr5:67583581-67583396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
32-223
               

               
Cow position:
               
chr5:43611935-43611755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
32-248
               

               
Cow position:
               
chr5:4956346-4956580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
32-271
               

               
Cow position:
               
chr5:25035018-25035245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
32-274
               

               
Cow position:
               
chr5:43858182-43858413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
32-307
               

               
Cow position:
               
chr5:12557051-12557318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
176, 77
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr5:46672452-46672178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr5:59115629-59115360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr5:30233150-30232876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
32-310
               

               
Cow position:
               
chr5:61914809-61914541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr5:62996194-62995997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr5:20288023-20288293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
233, 74
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr5:58447062-58446777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
33-310
               

               
Cow position:
               
chr5:66972663-66972399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
34-224
               

               
Cow position:
               
chr5:29895405-29895227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
34-304
               

               
Cow position:
               
chr5:13537392-13537109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 271
               

               
Conread position:
               
34-306
               

               
Cow position:
               
chr5:64321995-64321729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 72
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr5:70189310-70189107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
35-304
               

               
Cow position:
               
chr5:49341802-49342074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
36-288
               

               
Cow position:
               
chr5:3743564-3743313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
36-310
               

               
Cow position:
               
chr5:67932234-67932496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
37-227
               

               
Cow position:
               
chr5:57098643-57098466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
37-253
               

               
Cow position:
               
chr5:20387386-20387168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 210
               

               
Conread position:
               
37-260
               

               
Cow position:
               
chr5:50762474-50762254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
37-271
               

               
Cow position:
               
chr5:39036013-39035789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
37-281
               

               
Cow position:
               
chr5:5257056-5257289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
37-282
               

               
Cow position:
               
chr5:65552491-65552709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
37-310
               

               
Cow position:
               
chr5:7057166-7057429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
37-310
               

               
Cow position:
               
chr5:26262454-26262705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
239, 50
               

               
Conread position:
               
37-310
               

               
Cow position:
               
chr5:35459065-35459325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
164, 72
               

               
Conread position:
               
38-235
               

               
Cow position:
               
chr5:51800379-51800566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
38-284
               

               
Cow position:
               
chr5:56428061-56428314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 174
               

               
Conread position:
               
38-310
               

               
Cow position:
               
chr5:24136964-24136684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 157
               

               
Conread position:
               
38-310
               

               
Cow position:
               
chr5:45845460-45845723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
243, 71
               

               
Conread position:
               
38-310
               

               
Cow position:
               
chr5:54311586-54311306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 261
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr5:18091250-18091048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
39-254
               

               
Cow position:
               
chr5:3677957-3677749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
39-257
               

               
Cow position:
               
chr5:14168075-14167864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
39-274
               

               
Cow position:
               
chr5:44163144-44163363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
190, 48
               

               
Conread position:
               
39-308
               

               
Cow position:
               
chr5:52164944-52165205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
39-310
               

               
Cow position:
               
chr5:14903837-14904101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
39-310
               

               
Cow position:
               
chr5:55956139-55955878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
40-253
               

               
Cow position:
               
chr5:35145563-35145354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
184, 81
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr5:30492564-30492746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
42-254
               

               
Cow position:
               
chr5:16185606-16185404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
42-273
               

               
Cow position:
               
chr5:60948358-60948140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
167, 74
               

               
Conread position:
               
42-295
               

               
Cow position:
               
chr5:53055333-53055576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
247, 73
               

               
Conread position:
               
43-309
               

               
Cow position:
               
chr5:63234597-63234854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
44-253
               

               
Cow position:
               
chr5:44734503-44734698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
44-308
               

               
Cow position:
               
chr5:74858811-74858545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 30
               

               
Conread position:
               
45-310
               

               
Cow position:
               
chr5:55756190-55756454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 64
               

               
Conread position:
               
46-218
               

               
Cow position:
               
chr5:57447442-57447604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
46-221
               

               
Cow position:
               
chr5:31975754-31975578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 63
               

               
Conread position:
               
46-224
               

               
Cow position:
               
chr5:21339038-21339213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
46-237
               

               
Cow position:
               
chr5:59335995-59335813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
46-240
               

               
Cow position:
               
chr5:46710805-46710622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
46-245
               

               
Cow position:
               
chr5:71445614-71445425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
46-252
               

               
Cow position:
               
chr5:19561224-19561420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
46-257
               

               
Cow position:
               
chr5:12902141-12901940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
46-257
               

               
Cow position:
               
chr5:66659736-66659532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
46-272
               

               
Cow position:
               
chr5:56059842-56060062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
46-275
               

               
Cow position:
               
chr5:18062088-18062314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
46-278
               

               
Cow position:
               
chr5:38647878-38647644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 212
               

               
Conread position:
               
46-283
               

               
Cow position:
               
chr5:24069634-24069388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 208
               

               
Conread position:
               
46-284
               

               
Cow position:
               
chr5:67634286-67634520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
46-299
               

               
Cow position:
               
chr5:39447303-39447556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
46-303
               

               
Cow position:
               
chr5:34347511-34347751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
230, 63
               

               
Conread position:
               
46-308
               

               
Cow position:
               
chr5:5856082-5855834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
46-308
               

               
Cow position:
               
chr5:61912070-61912339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
46-309
               

               
Cow position:
               
chr5:43403131-43402872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
227, 63
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr5:30247303-30247549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr5:30253962-30253712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr5:49440630-49440903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr5:50822024-50821753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr5:53835943-53835684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
221, 63
               

               
Conread position:
               
46-310
               

               
Cow position:
               
chr5:54875471-54875729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
47-224
               

               
Cow position:
               
chr5:63939837-63940005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
47-238
               

               
Cow position:
               
chr5:25495130-25495316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
47-306
               

               
Cow position:
               
chr5:30628932-30629184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
152, 62
               

               
Conread position:
               
47-309
               

               
Cow position:
               
chr5:14550361-14550609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
47-310
               

               
Cow position:
               
chr5:24996000-24996252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
234, 46
               

               
Conread position:
               
48-309
               

               
Cow position:
               
chr5:11769492-11769241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
236, 69
               

               
Conread position:
               
48-310
               

               
Cow position:
               
chr5:42064427-42064174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
241, 61
               

               
Conread position:
               
49-283
               

               
Cow position:
               
chr5:60598968-60599208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
49-302
               

               
Cow position:
               
chr5:20779180-20779418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
242, 60
               

               
Conread position:
               
49-310
               

               
Cow position:
               
chr5:54767664-54767938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
59, 221
               

               
Conread position:
               
49-310
               

               
Cow position:
               
chr5:66551673-66551928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
50-291
               

               
Cow position:
               
chr5:35513439-35513204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
50-310
               

               
Cow position:
               
chr5:57156082-57156343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
51-310
               

               
Cow position:
               
chr5:53947116-53946867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
242, 64
               

               
Conread position:
               
53-310
               

               
Cow position:
               
chr5:66582185-66581936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
54-253
               

               
Cow position:
               
chr5:20812763-20812573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
56-249
               

               
Cow position:
               
chr5:53980540-53980723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
56-283
               

               
Cow position:
               
chr5:25020544-25020770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
67, 103
               

               
Conread position:
               
56-310
               

               
Cow position:
               
chr5:26097502-26097266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
58-294
               

               
Cow position:
               
chr5:44053836-44054064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
59-283
               

               
Cow position:
               
chr5:16939383-16939597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
61-308
               

               
Cow position:
               
chr5:49501611-49501852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 54
               

               
Conread position:
               
62-310
               

               
Cow position:
               
chr5:6503670-6503912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
205, 41
               

               
Conread position:
               
71-308
               

               
Cow position:
               
chr5:458698-458464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
74-309
               

               
Cow position:
               
chr5:5110863-5111103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
78-222
               

               
Cow position:
               
chr5:54154000-54154144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
82-240
               

               
Cow position:
               
chr5:70353786-70353944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
102-307
               

               
Cow position:
               
chr5:21039807-21040001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
108-295
               

               
Cow position:
               
chr5:40356688-40356863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
168, 12
               

               
Conread position:
               
118-256
               

               
Cow position:
               
chr5:38040402-38040540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
124-267
               

               
Cow position:
               
chr5:12738402-12738542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
124-283
               

               
Cow position:
               
chr5:57150823-57150662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
124-306
               

               
Cow position:
               
chr5:4221135-4220959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 117
               

               
Conread position:
               
124-306
               

               
Cow position:
               
chr5:64523706-64523893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr5:4031830-4032021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr5:27306462-27306275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr5:71494977-71494790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
164, 151
               

               
Conread position:
               
125-282
               

               
Cow position:
               
chr5:60908819-60908665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
125-283
               

               
Cow position:
               
chr5:65679820-65679972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
125-310
               

               
Cow position:
               
chr5:26094011-26094197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
125-310
               

               
Cow position:
               
chr5:59872923-59873120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
127-295
               

               
Cow position:
               
chr5:45225663-45225827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
127-305
               

               
Cow position:
               
chr5:35126208-35126029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
141, 162
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr5:3589180-3588999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
149, 78
               

               
Conread position:
               
127-310
               

               
Cow position:
               
chr5:38076329-38076516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
127-310
               

               
Cow position:
               
chr5:47323615-47323436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
129-309
               

               
Cow position:
               
chr5:41165239-41165058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
129-310
               

               
Cow position:
               
chr5:67212511-67212327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
130-309
               

               
Cow position:
               
chr5:28224602-28224426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
131-251
               

               
Cow position:
               
chr5:19079398-19079281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
131-299
               

               
Cow position:
               
chr5:56287353-56287520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
136, 150
               

               
Conread position:
               
131-310
               

               
Cow position:
               
chr5:28302594-28302779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr5:69731648-69731476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
153, 87
               

               
Conread position:
               
134-283
               

               
Cow position:
               
chr5:27293738-27293886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chr5:63426858-63427036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 159
               

               
Conread position:
               
135-227
               

               
Cow position:
               
chr5:4336437-4336345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-227
               

               
Cow position:
               
chr5:23866335-23866427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-254
               

               
Cow position:
               
chr5:36823028-36822913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
135-274
               

               
Cow position:
               
chr5:59627245-59627106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-307
               

               
Cow position:
               
chr5:30805309-30805140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr5:26476873-26477048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
156, 116
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr5:37808518-37808697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr5:54060421-54060249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
156, 105
               

               
Conread position:
               
135-308
               

               
Cow position:
               
chr5:57230192-57230367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
135-309
               

               
Cow position:
               
chr5:9369126-9369295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr5:36839104-36838928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr5:36855351-36855176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
105, 143
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr5:54350216-54350392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chr5:57686592-57686770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
136-283
               

               
Cow position:
               
chr5:55129487-55129341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
136-294
               

               
Cow position:
               
chr5:29771672-29771515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
154, 140
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chr5:18899117-18898947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chr5:52000362-52000193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chr5:55795822-55795994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
87, 141
               

               
Conread position:
               
137-238
               

               
Cow position:
               
chr5:17644485-17644586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
137-252
               

               
Cow position:
               
chr5:30638435-30638551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
137-272
               

               
Cow position:
               
chr5:20212103-20211970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
137-283
               

               
Cow position:
               
chr5:1396742-1396596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
137-307
               

               
Cow position:
               
chr5:34528689-34528527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
137-310
               

               
Cow position:
               
chr5:30949772-30949946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
137-310
               

               
Cow position:
               
chr5:41981511-41981341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
144, 89
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chr5:15471071-15470903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
150, 82
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chr5:63832070-63831898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
128, 135
               

               
Conread position:
               
139-274
               

               
Cow position:
               
chr5:28230305-28230168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
139-288
               

               
Cow position:
               
chr5:53935408-53935555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
141-304
               

               
Cow position:
               
chr5:27419590-27419755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
134, 149
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chr5:27411261-27411422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chr5:22643093-22643254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
142-299
               

               
Cow position:
               
chr5:29352989-29353145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
144-273
               

               
Cow position:
               
chr5:4267806-4267677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-284
               

               
Cow position:
               
chr5:6528821-6528679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
148-307
               

               
Cow position:
               
chr5:64758635-64758797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
149-310
               

               
Cow position:
               
chr5:44752176-44752346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
149-310
               

               
Cow position:
               
chr5:60715237-60715391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
153-310
               

               
Cow position:
               
chr5:453684-453530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
157-291
               

               
Cow position:
               
chr5:55350787-55350922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 121
               

               
Conread position:
               
161-310
               

               
Cow position:
               
chr5:32696704-32696852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
164-310
               

               
Cow position:
               
chr5:52644964-52645108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr5:31918750-31918616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.