Cow genome map

Conread name: rpigcf0_002703.y1

Conread position: 7-235
Cow position: chrX:43014397-43014627 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 0

Conread position: 9-238
Cow position: chrX:31983320-31983542 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 9-257
Cow position: chrX:32877119-32877351 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 6

Conread position: 9-274
Cow position: chrX:47079889-47079634 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 29

Conread position: 10-253
Cow position: chrX:44995763-44995526 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 101

Conread position: 11-255
Cow position: chrX:35681827-35681592 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 20

Conread position: 11-310
Cow position: chrX:32821296-32821002 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 114, 21

Conread position: 13-238
Cow position: chrX:29451288-29451508 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 35

Conread position: 14-273
Cow position: chrX:39179974-39180225 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 29

Conread position: 14-304
Cow position: chrX:38968151-38967871 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 238, 94

Conread position: 15-219
Cow position: chrX:21910760-21910965 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 73

Conread position: 15-240
Cow position: chrX:27270624-27270416 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 172, 58

Conread position: 15-257
Cow position: chrX:37062315-37062561 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 97, 13

Conread position: 15-283
Cow position: chrX:30672133-30672397 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 190, 32

Conread position: 15-307
Cow position: chrX:18694670-18694951 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 137, 24

Conread position: 15-309
Cow position: chrX:22386981-22387269 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 13, 102

Conread position: 15-310
Cow position: chrX:24332029-24331751 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 15-310
Cow position: chrX:47657648-47657356 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 145

Conread position: 16-241
Cow position: chrX:5097539-5097759 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 51

Conread position: 16-283
Cow position: chrX:11084787-11085065 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 109, 8

Conread position: 16-283
Cow position: chrX:27446936-27446685 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 16-308
Cow position: chrX:42492268-42492543 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 16-310
Cow position: chrX:41941873-41941598 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 17-249
Cow position: chrX:14925524-14925308 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 17-267
Cow position: chrX:15546133-15545896 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 0

Conread position: 17-309
Cow position: chrX:15146943-15147214 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 60

Conread position: 17-310
Cow position: chrX:17956942-17956667 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 18, 31

Conread position: 17-310
Cow position: chrX:40480593-40480896 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 215

Conread position: 18-271
Cow position: chrX:11656328-11656091 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 19-229
Cow position: chrX:11589117-11589317 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 24

Conread position: 19-310
Cow position: chrX:23498413-23498706 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 90, 12

Conread position: 21-232
Cow position: chrX:25282765-25282989 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 88, 0

Conread position: 21-237
Cow position: chrX:41435292-41435505 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 89

Conread position: 21-238
Cow position: chrX:6389329-6389124 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 95

Conread position: 21-238
Cow position: chrX:34508811-34508587 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 78

Conread position: 21-239
Cow position: chrX:46068517-46068717 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 21-264
Cow position: chrX:20345700-20345470 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 21-271
Cow position: chrX:32942830-32943066 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 55

Conread position: 21-274
Cow position: chrX:35659044-35658807 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 53

Conread position: 21-281
Cow position: chrX:27668713-27668960 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 252, 68

Conread position: 21-304
Cow position: chrX:1175741-1176003 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 21-309
Cow position: chrX:6599525-6599811 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 86, 97

Conread position: 21-309
Cow position: chrX:29601580-29601857 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 88

Conread position: 21-309
Cow position: chrX:34565532-34565254 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 263, 16

Conread position: 21-310
Cow position: chrX:5872580-5872291 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 21

Conread position: 21-310
Cow position: chrX:25815651-25815936 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 257, 16

Conread position: 21-310
Cow position: chrX:46588067-46587792 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 263, 21

Conread position: 21-310
Cow position: chrX:46793501-46793774 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 246, 88

Conread position: 21-310
Cow position: chrX:48474153-48473879 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 246, 21

Conread position: 22-233
Cow position: chrX:37867502-37867301 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 22-252
Cow position: chrX:2314371-2314590 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 21

Conread position: 22-310
Cow position: chrX:34441208-34441479 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 263, 6

Conread position: 23-309
Cow position: chrX:30133077-30133347 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 262, 51

Conread position: 23-310
Cow position: chrX:40531779-40532072 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 91, 255

Conread position: 24-267
Cow position: chrX:26843020-26843255 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 24-273
Cow position: chrX:27447965-27447708 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 15, 86

Conread position: 24-273
Cow position: chrX:35285420-35285181 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 85, 0

Conread position: 24-299
Cow position: chrX:42449769-42450033 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 18

Conread position: 24-308
Cow position: chrX:11633927-11633654 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 18

Conread position: 24-309
Cow position: chrX:31729681-31729415 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 264, 18

Conread position: 24-309
Cow position: chrX:44192197-44192476 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 18

Conread position: 24-310
Cow position: chrX:5134719-5134447 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 13

Conread position: 24-310
Cow position: chrX:12290962-12290694 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 25-257
Cow position: chrX:27296252-27296504 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 206

Conread position: 25-283
Cow position: chrX:47349781-47349514 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 25-308
Cow position: chrX:36367689-36367968 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 220, 82

Conread position: 25-310
Cow position: chrX:7278151-7277885 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 25-310
Cow position: chrX:29679999-29680288 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 7, 83

Conread position: 26-310
Cow position: chrX:37129544-37129239 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 12, 270

Conread position: 27-231
Cow position: chrX:41363607-41363809 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 27-248
Cow position: chrX:17498565-17498355 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 27-274
Cow position: chrX:19018584-19018824 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 81

Conread position: 27-280
Cow position: chrX:24170483-24170728 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 27-306
Cow position: chrX:24749331-24749063 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 21, 79

Conread position: 27-309
Cow position: chrX:41878695-41878959 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 256, 15

Conread position: 27-310
Cow position: chrX:19394798-19394524 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 28-240
Cow position: chrX:35409994-35409793 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 28-249
Cow position: chrX:27667682-27667457 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 28-310
Cow position: chrX:42246940-42247214 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 14

Conread position: 29-310
Cow position: chrX:26881321-26881596 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 60

Conread position: 29-310
Cow position: chrX:42855704-42855425 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 80

Conread position: 31-245
Cow position: chrX:40451829-40452048 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 128

Conread position: 31-264
Cow position: chrX:12250053-12249828 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 173, 16

Conread position: 31-310
Cow position: chrX:36976193-36975922 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 88

Conread position: 32-240
Cow position: chrX:27415350-27415539 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 32-271
Cow position: chrX:6267908-6267678 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 32-285
Cow position: chrX:31829205-31829465 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 20

Conread position: 32-308
Cow position: chrX:152144-151878 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 78

Conread position: 32-310
Cow position: chrX:34503162-34502894 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 48, 10

Conread position: 33-224
Cow position: chrX:36039652-36039456 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 33-253
Cow position: chrX:34398546-34398756 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 33-308
Cow position: chrX:25037229-25036961 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 33-309
Cow position: chrX:23513765-23514042 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 20

Conread position: 34-273
Cow position: chrX:16323779-16324006 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 75, 0

Conread position: 34-274
Cow position: chrX:17524146-17524377 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 76

Conread position: 34-280
Cow position: chrX:27175236-27175004 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 76

Conread position: 34-297
Cow position: chrX:38853447-38853180 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 94

Conread position: 34-307
Cow position: chrX:20339659-20339916 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 34-310
Cow position: chrX:15006922-15007177 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 201
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 11, 56

Conread position: 35-260
Cow position: chrX:42875444-42875232 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 204, 74

Conread position: 35-274
Cow position: chrX:38302049-38301816 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 85, 0

Conread position: 35-310
Cow position: chrX:616005-616290 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 7

Conread position: 36-274
Cow position: chrX:1122313-1122536 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 36-274
Cow position: chrX:11654001-11653771 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 187, 59

Conread position: 36-292
Cow position: chrX:38218947-38218704 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 193
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 141, 73

Conread position: 36-310
Cow position: chrX:10516488-10516222 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 248, 79

Conread position: 36-310
Cow position: chrX:13382576-13382302 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 191

Conread position: 36-310
Cow position: chrX:40557423-40557709 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 37-208
Cow position: chrX:42164645-42164467 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 37-216
Cow position: chrX:23182734-23182918 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 37-218
Cow position: chrX:40046335-40046515 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 72

Conread position: 37-242
Cow position: chrX:42760486-42760291 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 37-254
Cow position: chrX:1960192-1960398 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 37-257
Cow position: chrX:28068084-28067874 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 37-271
Cow position: chrX:40035209-40035431 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 209, 19

Conread position: 37-274
Cow position: chrX:5679697-5679913 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 37-295
Cow position: chrX:3806911-3806670 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 0

Conread position: 37-304
Cow position: chrX:6407779-6407522 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 14, 80

Conread position: 37-308
Cow position: chrX:35269089-35268839 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 37-310
Cow position: chrX:7351534-7351273 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 37-310
Cow position: chrX:7695996-7695722 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 120

Conread position: 37-310
Cow position: chrX:24365589-24365853 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 237, 72

Conread position: 37-310
Cow position: chrX:38654197-38654460 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 73

Conread position: 38-249
Cow position: chrX:48822110-48822310 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 38-267
Cow position: chrX:20957469-20957252 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 38-303
Cow position: chrX:21665004-21665261 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 102, 49

Conread position: 39-222
Cow position: chrX:23485761-23485580 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 39-258
Cow position: chrX:40649133-40648919 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 178, 71

Conread position: 39-273
Cow position: chrX:40337142-40336919 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 39-295
Cow position: chrX:20677911-20678152 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 80

Conread position: 39-310
Cow position: chrX:4109416-4109162 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 39-310
Cow position: chrX:16348323-16348596 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 69, 129

Conread position: 40-226
Cow position: chrX:43011913-43012098 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 127

Conread position: 41-310
Cow position: chrX:37489958-37489695 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 68

Conread position: 42-237
Cow position: chrX:41990895-41991090 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 88

Conread position: 42-253
Cow position: chrX:31373778-31373564 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 70, 33

Conread position: 42-275
Cow position: chrX:32330399-32330173 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 144, 72

Conread position: 42-303
Cow position: chrX:40108285-40108539 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 184, 67

Conread position: 42-309
Cow position: chrX:41027388-41027129 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 234, 67

Conread position: 42-310
Cow position: chrX:21593519-21593260 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 32

Conread position: 42-310
Cow position: chrX:27393790-27394050 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 31

Conread position: 43-283
Cow position: chrX:29478949-29478723 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 59, 0

Conread position: 44-251
Cow position: chrX:4612648-4612852 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 64, 29

Conread position: 44-309
Cow position: chrX:31626739-31627008 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 23

Conread position: 44-310
Cow position: chrX:40269734-40269460 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 70, 53

Conread position: 44-310
Cow position: chrX:44397237-44396990 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 104, 64

Conread position: 45-310
Cow position: chrX:4278893-4279145 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 30

Conread position: 46-206
Cow position: chrX:3543089-3542931 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 46-208
Cow position: chrX:13784988-13785149 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 46-226
Cow position: chrX:4592262-4592447 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 46-233
Cow position: chrX:47100370-47100549 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 46-271
Cow position: chrX:42380888-42381102 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 46-273
Cow position: chrX:4559958-4559747 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 46-275
Cow position: chrX:32910321-32910110 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 46-278
Cow position: chrX:4632630-4632855 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 69

Conread position: 46-291
Cow position: chrX:4327958-4328194 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 70

Conread position: 46-303
Cow position: chrX:25412143-25411886 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 27

Conread position: 46-304
Cow position: chrX:15820829-15820575 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 12

Conread position: 46-308
Cow position: chrX:21328138-21327880 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 185, 63

Conread position: 46-309
Cow position: chrX:9201767-9201523 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 63

Conread position: 46-309
Cow position: chrX:40680839-40680584 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 245, 69

Conread position: 46-309
Cow position: chrX:44339097-44339351 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 230, 25

Conread position: 46-310
Cow position: chrX:4399342-4399095 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 63

Conread position: 46-310
Cow position: chrX:12095547-12095801 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 201, 64

Conread position: 46-310
Cow position: chrX:20168779-20168530 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 0

Conread position: 46-310
Cow position: chrX:23562097-23561833 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 68, 235

Conread position: 46-310
Cow position: chrX:27508800-27509051 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 46-310
Cow position: chrX:38549671-38549419 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 60

Conread position: 46-310
Cow position: chrX:41270743-41271025 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 46-310
Cow position: chrX:46532266-46532529 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 196
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 230, 63

Conread position: 47-307
Cow position: chrX:31489744-31489493 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 229, 68

Conread position: 47-308
Cow position: chrX:26493230-26492981 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 216, 61

Conread position: 47-310
Cow position: chrX:8869181-8869432 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 62

Conread position: 48-274
Cow position: chrX:37956067-37955854 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 48-310
Cow position: chrX:25035159-25035407 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 50-284
Cow position: chrX:6850445-6850207 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 16

Conread position: 50-310
Cow position: chrX:23113512-23113248 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 92, 41

Conread position: 51-309
Cow position: chrX:27261409-27261161 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 169, 20

Conread position: 51-310
Cow position: chrX:4645695-4645940 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 53-283
Cow position: chrX:34420953-34420733 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 0

Conread position: 54-288
Cow position: chrX:31294353-31294579 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 0

Conread position: 56-310
Cow position: chrX:10831267-10831521 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 152, 53

Conread position: 57-309
Cow position: chrX:28877953-28878196 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 245, 58

Conread position: 58-309
Cow position: chrX:34238935-34238688 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 103, 57

Conread position: 58-310
Cow position: chrX:8731306-8731059 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 209, 57

Conread position: 61-308
Cow position: chrX:22822264-22822023 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 74-310
Cow position: chrX:169345-169573 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 78-309
Cow position: chrX:18964633-18964852 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 203, 41

Conread position: 79-274
Cow position: chrX:29733391-29733585 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 35

Conread position: 107-290
Cow position: chrX:39418664-39418853 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 118-289
Cow position: chrX:27145767-27145597 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 0

Conread position: 119-309
Cow position: chrX:23188622-23188804 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 109, 0

Conread position: 120-231
Cow position: chrX:24547340-24547450 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 97
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 123-307
Cow position: chrX:161570-161386 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 38

Conread position: 124-268
Cow position: chrX:47342274-47342129 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 106

Conread position: 124-309
Cow position: chrX:20743760-20743575 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 161, 16

Conread position: 124-309
Cow position: chrX:42235368-42235555 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 152, 26

Conread position: 124-310
Cow position: chrX:29194387-29194205 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 82

Conread position: 124-310
Cow position: chrX:32623727-32623539 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 152, 34

Conread position: 124-310
Cow position: chrX:33640134-33639945 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 141

Conread position: 124-310
Cow position: chrX:42894084-42893889 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 176

Conread position: 125-271
Cow position: chrX:19761910-19761764 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 125-296
Cow position: chrX:46770807-46770977 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 54, 37

Conread position: 125-308
Cow position: chrX:6259990-6260174 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 107

Conread position: 125-308
Cow position: chrX:34222872-34222688 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 64

Conread position: 125-309
Cow position: chrX:32318462-32318276 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 125-310
Cow position: chrX:878224-878411 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 166, 0

Conread position: 125-310
Cow position: chrX:4515847-4515656 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 36, 68

Conread position: 125-310
Cow position: chrX:23562788-23562605 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 151, 0

Conread position: 125-310
Cow position: chrX:24287774-24287956 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 120

Conread position: 126-304
Cow position: chrX:42873540-42873368 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 59, 96

Conread position: 127-267
Cow position: chrX:36313852-36313992 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 127-293
Cow position: chrX:31436628-31436462 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 127-307
Cow position: chrX:36514739-36514919 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 23

Conread position: 127-308
Cow position: chrX:29553438-29553258 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 166, 9

Conread position: 127-308
Cow position: chrX:30840700-30840513 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 106, 160

Conread position: 129-297
Cow position: chrX:18046548-18046388 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 129-310
Cow position: chrX:17888271-17888447 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 170, 92

Conread position: 130-273
Cow position: chrX:25459578-25459726 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 91

Conread position: 130-310
Cow position: chrX:7710388-7710566 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 0

Conread position: 131-310
Cow position: chrX:5900612-5900441 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 89, 0

Conread position: 133-309
Cow position: chrX:39352933-39352753 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 77

Conread position: 133-310
Cow position: chrX:10305203-10305376 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 159, 87

Conread position: 133-310
Cow position: chrX:22914894-22915065 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 149
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 50, 0

Conread position: 134-235
Cow position: chrX:30831186-30831287 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 134-306
Cow position: chrX:32431770-32431597 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 150, 16

Conread position: 135-251
Cow position: chrX:2551238-2551121 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 135-299
Cow position: chrX:23785794-23785631 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 62

Conread position: 135-301
Cow position: chrX:4825691-4825855 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 17

Conread position: 135-308
Cow position: chrX:5679426-5679594 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 135-308
Cow position: chrX:6463744-6463584 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 135-309
Cow position: chrX:126913-126742 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 141, 99

Conread position: 135-309
Cow position: chrX:4043721-4043887 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 135-309
Cow position: chrX:46072671-46072847 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 141, 0

Conread position: 135-310
Cow position: chrX:11717637-11717816 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 160

Conread position: 135-310
Cow position: chrX:43527654-43527482 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 136-253
Cow position: chrX:46909960-46909843 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 136-283
Cow position: chrX:16575257-16575110 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 136-304
Cow position: chrX:35885582-35885751 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 155

Conread position: 136-309
Cow position: chrX:19943091-19943264 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 155, 69

Conread position: 136-309
Cow position: chrX:27511573-27511402 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 136-310
Cow position: chrX:6278353-6278528 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 150, 0

Conread position: 136-310
Cow position: chrX:9365531-9365703 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 140, 0

Conread position: 136-310
Cow position: chrX:11614838-11614672 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 136-310
Cow position: chrX:14973601-14973768 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 136-310
Cow position: chrX:45598460-45598629 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 103

Conread position: 137-255
Cow position: chrX:10076115-10075999 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 137-257
Cow position: chrX:41810024-41810144 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 137-274
Cow position: chrX:1719259-1719122 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 137-310
Cow position: chrX:31252551-31252390 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 139-310
Cow position: chrX:29289720-29289551 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 159, 137

Conread position: 140-309
Cow position: chrX:41068866-41068694 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 142-310
Cow position: chrX:37119731-37119566 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 149, 15

Conread position: 143-310
Cow position: chrX:29121185-29121018 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 133

Conread position: 144-310
Cow position: chrX:10411847-10412014 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 134

Conread position: 145-308
Cow position: chrX:20881809-20881965 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 145-310
Cow position: chrX:31515310-31515140 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 149-275
Cow position: chrX:25788773-25788899 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 149-281
Cow position: chrX:16830352-16830225 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 149-310
Cow position: chrX:1499798-1499637 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 128

Conread position: 151-288
Cow position: chrX:35278459-35278321 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 152-277
Cow position: chrX:37665820-37665695 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 152-310
Cow position: chrX:28134467-28134318 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 153-310
Cow position: chrX:19690343-19690190 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 131
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 120, 105

Conread position: 168-310
Cow position: chrX:21004797-21004653 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 168-310
Cow position: chrX:26625558-26625704 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 183-310
Cow position: chrX:27685347-27685220 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 94

Conread position: 192-309
Cow position: chrX:1572050-1572164 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 0

Show alignments to all cow chromosomes.