Cow genome map

Conread name: rpigcf0_003029.y1

Conread position: 1-108
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 1-113
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-114
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-118
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 91

Conread position: 1-119
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-127
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-134
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 116

Conread position: 1-142
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-185
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 1-189
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 112

Conread position: 1-190
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 1-191
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-193
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 75

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 181

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 35

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 95

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 91

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-199
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 48

Conread position: 1-199
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 104

Conread position: 1-200
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 23

Conread position: 1-200
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 23

Conread position: 1-200
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 1-200
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 96, 29

Conread position: 1-200
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 128

Conread position: 1-200
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 91

Conread position: 1-200
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 1-203
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 74

Conread position: 1-203
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 91

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 87

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 1-208
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 203

Conread position: 1-208
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 106

Conread position: 1-208
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 37

Conread position: 1-208
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-208
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 116

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 120

Conread position: 1-215
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 48

Conread position: 1-215
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 77

Conread position: 1-215
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 96, 28

Conread position: 1-215
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 213

Conread position: 1-215
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 98

Conread position: 1-224
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 5

Conread position: 1-225
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 189, 30

Conread position: 1-228
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 169

Conread position: 1-231
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 185

Conread position: 1-235
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 80

Conread position: 1-236
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 90

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 80

Conread position: 1-239
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 1-326
Cow position:
Alignm length: 339
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 87

Conread position: 2-116
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 98

Conread position: 2-132
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 2-148
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 74

Conread position: 2-193
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 49

Conread position: 2-200
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 2-200
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 105

Conread position: 2-205
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 15

Conread position: 2-208
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 90

Conread position: 2-208
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 98

Conread position: 2-210
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 101

Conread position: 2-215
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 109, 25

Conread position: 2-221
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 98

Conread position: 2-554
Cow position:
Alignm length: 565
Alignm identity: 355
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 31, 72

Conread position: 3-129
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 3-158
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-172
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 77

Conread position: 3-198
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 127

Conread position: 3-199
Cow position:
Alignm length: 202
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 150

Conread position: 3-201
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-203
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 51

Conread position: 3-205
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 9

Conread position: 3-208
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 109

Conread position: 3-210
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 90

Conread position: 3-212
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 181, 25

Conread position: 4-205
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 88

Conread position: 4-208
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 67

Conread position: 5-200
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 83

Conread position: 5-203
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 96

Conread position: 5-207
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 171

Conread position: 5-224
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 48

Conread position: 6-200
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 97

Conread position: 6-208
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 35

Conread position: 6-210
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 43

Conread position: 6-220
Cow position:
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 107

Conread position: 7-200
Cow position:
Alignm length: 198
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 80

Conread position: 7-204
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 23, 69

Conread position: 7-211
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 95

Conread position: 8-208
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 91

Conread position: 9-223
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 99

Conread position: 11-200
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 117

Conread position: 11-207
Cow position:
Alignm length: 200
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 19, 97

Conread position: 11-208
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 18

Conread position: 11-210
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 163

Conread position: 13-189
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 68

Conread position: 14-216
Cow position:
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 162

Conread position: 15-203
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 34

Conread position: 15-209
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 15-216
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 60

Conread position: 17-210
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 189

Conread position: 17-210
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 47

Conread position: 20-225
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 37

Conread position: 21-148
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 21-182
Cow position:
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 29-208
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 31-143
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 31-204
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 31-208
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 51-215
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 55-200
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 58-212
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 7

Conread position: 61-200
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 98-216
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 98-246
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 102-204
Cow position:
Alignm length: 103
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 106-483
Cow position:
Alignm length: 391
Alignm identity: 250
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 21

Conread position: 148-558
Cow position:
Alignm length: 430
Alignm identity: 279
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 126

Conread position: 154-564
Cow position:
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 188-569
Cow position:
Alignm length: 408
Alignm identity: 273
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 256

Conread position: 193-569
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 235

Conread position: 195-568
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 229

Conread position: 196-417
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 44

Conread position: 196-569
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 6

Conread position: 197-328
Cow position:
Alignm length: 134
Alignm identity: 112
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 96

Conread position: 197-569
Cow position:
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 12

Conread position: 198-563
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 19

Conread position: 199-566
Cow position:
Alignm length: 374
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 166, 39

Conread position: 199-571
Cow position:
Alignm length: 391
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 75

Conread position: 202-562
Cow position:
Alignm length: 369
Alignm identity: 251
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 27, 108

Conread position: 202-570
Cow position:
Alignm length: 379
Alignm identity: 264
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 81

Conread position: 209-569
Cow position:
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 167

Conread position: 217-565
Cow position:
Alignm length: 357
Alignm identity: 246
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 57

Conread position: 221-565
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 10, 79

Conread position: 235-571
Cow position:
Alignm length: 339
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 123

Conread position: 248-569
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 145

Conread position: 308-564
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 12

Show alignments to all cow chromosomes.