Cow genome map
| Conread name: | rpigcf0_003029.y1 |
| Conread position: | 1-108 |
| Cow position: | chr1:79663416-79663307 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-113 |
| Cow position: | chr1:78697750-78697635 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-114 |
| Cow position: | chr1:99642347-99642231 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-118 |
| Cow position: | chr1:23969035-23968919 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 1-119 |
| Cow position: | chr1:83606428-83606308 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-127 |
| Cow position: | chr1:97938979-97939107 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-134 |
| Cow position: | chr1:39068934-39068802 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 31, 116 |
| Conread position: | 1-142 |
| Cow position: | chr1:99024209-99024066 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-164 |
| Cow position: | chr1:86383784-86383617 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-185 |
| Cow position: | chr1:48730810-48730619 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-189 |
| Cow position: | chr1:31855225-31855036 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 112 |
| Conread position: | 1-190 |
| Cow position: | chr1:3417377-3417572 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-191 |
| Cow position: | chr1:83783908-83783704 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-193 |
| Cow position: | chr1:98511949-98512134 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 75 |
| Conread position: | 1-194 |
| Cow position: | chr1:42822293-42822491 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 181 |
| Conread position: | 1-197 |
| Cow position: | chr1:43872297-43872108 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 1-197 |
| Cow position: | chr1:57297504-57297709 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 1-197 |
| Cow position: | chr1:68845147-68844955 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 91 |
| Conread position: | 1-197 |
| Cow position: | chr1:77683374-77683575 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-199 |
| Cow position: | chr1:84010794-84010991 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 1-199 |
| Cow position: | chr1:98594587-98594794 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-200 |
| Cow position: | chr1:43148523-43148334 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 1-200 |
| Cow position: | chr1:44269113-44269312 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 1-200 |
| Cow position: | chr1:48214133-48213941 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 1-200 |
| Cow position: | chr1:50991955-50992163 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-200 |
| Cow position: | chr1:71253531-71253330 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 1-200 |
| Cow position: | chr1:76658045-76657844 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 128 |
| Conread position: | 1-200 |
| Cow position: | chr1:81580200-81580414 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-200 |
| Cow position: | chr1:88359900-88360089 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 1-200 |
| Cow position: | chr1:89341958-89341751 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-203 |
| Cow position: | chr1:8624427-8624220 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 1-203 |
| Cow position: | chr1:23180116-23180313 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 1-205 |
| Cow position: | chr1:24656267-24656465 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 1-208 |
| Cow position: | chr1:816387-816185 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-208 |
| Cow position: | chr1:1606112-1605919 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-208 |
| Cow position: | chr1:8347145-8347362 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 29, 203 |
| Conread position: | 1-208 |
| Cow position: | chr1:10716519-10716719 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 1-208 |
| Cow position: | chr1:19304594-19304810 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 1-208 |
| Cow position: | chr1:32857060-32857274 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1-208 |
| Cow position: | chr1:77232556-77232357 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 1-210 |
| Cow position: | chr1:16961988-16961780 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 120 |
| Conread position: | 1-215 |
| Cow position: | chr1:11226224-11226010 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 1-215 |
| Cow position: | chr1:42537301-42537079 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 1-215 |
| Cow position: | chr1:83004675-83004885 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 1-215 |
| Cow position: | chr1:98461308-98461532 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 29, 213 |
| Conread position: | 1-215 |
| Cow position: | chr1:101177537-101177744 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 1-224 |
| Cow position: | chr1:53540597-53540814 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 1-225 |
| Cow position: | chr1:59020684-59020897 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 189, 30 |
| Conread position: | 1-228 |
| Cow position: | chr1:98576069-98576308 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 29, 169 |
| Conread position: | 1-231 |
| Cow position: | chr1:69264830-69265060 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 29, 185 |
| Conread position: | 1-235 |
| Cow position: | chr1:85712462-85712701 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 1-236 |
| Cow position: | chr1:63434784-63434560 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 1-238 |
| Cow position: | chr1:90976066-90975834 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 1-239 |
| Cow position: | chr1:95153244-95153492 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-326 |
| Cow position: | chr1:68710300-68710624 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 2-116 |
| Cow position: | chr1:22525901-22526016 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 2-132 |
| Cow position: | chr1:34318763-34318631 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-148 |
| Cow position: | chr1:90868418-90868278 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 2-193 |
| Cow position: | chr1:3431337-3431144 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 2-200 |
| Cow position: | chr1:47883593-47883391 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-200 |
| Cow position: | chr1:94226532-94226340 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 30, 105 |
| Conread position: | 2-205 |
| Cow position: | chr1:45874046-45873838 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 2-208 |
| Cow position: | chr1:55194223-55194018 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 2-208 |
| Cow position: | chr1:92684671-92684469 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 2-210 |
| Cow position: | chr1:73719484-73719687 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 2-215 |
| Cow position: | chr1:92095395-92095602 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 2-221 |
| Cow position: | chr1:79844488-79844702 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 2-554 |
| Cow position: | chr1:23099926-23100474 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 355 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 31, 72 |
| Conread position: | 3-129 |
| Cow position: | chr1:46100816-46100688 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-158 |
| Cow position: | chr1:45670659-45670813 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-172 |
| Cow position: | chr1:98551744-98551914 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 3-198 |
| Cow position: | chr1:68400263-68400066 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 127 |
| Conread position: | 3-199 |
| Cow position: | chr1:8670797-8670991 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 150 |
| Conread position: | 3-201 |
| Cow position: | chr1:86578989-86579174 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-203 |
| Cow position: | chr1:83747967-83748175 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 3-205 |
| Cow position: | chr1:64328944-64329141 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 3-208 |
| Cow position: | chr1:23055071-23055272 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 3-210 |
| Cow position: | chr1:3962663-3962462 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 3-212 |
| Cow position: | chr1:49299686-49299903 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-213 |
| Cow position: | chr1:76470677-76470872 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 181, 25 |
| Conread position: | 4-205 |
| Cow position: | chr1:72356381-72356577 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 4-208 |
| Cow position: | chr1:29971517-29971328 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 67 |
| Conread position: | 5-200 |
| Cow position: | chr1:6986716-6986521 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 5-203 |
| Cow position: | chr1:1875412-1875618 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 96 |
| Conread position: | 5-207 |
| Cow position: | chr1:45478837-45478634 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 171 |
| Conread position: | 5-224 |
| Cow position: | chr1:24777967-24777756 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 6-200 |
| Cow position: | chr1:70291814-70292007 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 6-208 |
| Cow position: | chr1:76080834-76081048 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 6-210 |
| Cow position: | chr1:88231738-88231554 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 6-220 |
| Cow position: | chr1:6962917-6963129 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 107 |
| Conread position: | 7-200 |
| Cow position: | chr1:78068041-78067846 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 7-204 |
| Cow position: | chr1:75080527-75080331 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 7-211 |
| Cow position: | chr1:40238595-40238800 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 8-208 |
| Cow position: | chr1:22448226-22448030 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 9-223 |
| Cow position: | chr1:72070084-72069879 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 11-200 |
| Cow position: | chr1:37886780-37886583 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 11-207 |
| Cow position: | chr1:42404167-42404361 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 11-208 |
| Cow position: | chr1:6398484-6398293 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 11-210 |
| Cow position: | chr1:53671718-53671513 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 13-189 |
| Cow position: | chr1:65638945-65639116 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 14-216 |
| Cow position: | chr1:14106591-14106387 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 162 |
| Conread position: | 15-203 |
| Cow position: | chr1:7452945-7453121 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 15-209 |
| Cow position: | chr1:92999067-92999263 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 15-216 |
| Cow position: | chr1:96136503-96136703 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 17-210 |
| Cow position: | chr1:21835969-21836175 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 189 |
| Conread position: | 17-210 |
| Cow position: | chr1:60478673-60478479 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 20-225 |
| Cow position: | chr1:65103661-65103862 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 21-148 |
| Cow position: | chr1:68672560-68672431 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 21-182 |
| Cow position: | chr1:97806753-97806912 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 29-208 |
| Cow position: | chr1:17317308-17317131 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 31-143 |
| Cow position: | chr1:15167885-15167772 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 31-204 |
| Cow position: | chr1:69911157-69911320 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 31-208 |
| Cow position: | chr1:51469596-51469762 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 51-215 |
| Cow position: | chr1:40207036-40206866 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 55-200 |
| Cow position: | chr1:98605642-98605500 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 58-212 |
| Cow position: | chr1:2935228-2935382 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 61-200 |
| Cow position: | chr1:95101022-95101155 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 98-216 |
| Cow position: | chr1:65883316-65883436 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 98-246 |
| Cow position: | chr1:6066792-6066643 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 102-204 |
| Cow position: | chr1:46221075-46220975 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 106-483 |
| Cow position: | chr1:71078850-71078467 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 21 |
| Conread position: | 148-558 |
| Cow position: | chr1:37309398-37308976 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 126 |
| Conread position: | 154-564 |
| Cow position: | chr1:76700248-76699834 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 188-569 |
| Cow position: | chr1:21430790-21430393 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 256 |
| Conread position: | 193-569 |
| Cow position: | chr1:52863758-52863372 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 235 |
| Conread position: | 195-568 |
| Cow position: | chr1:22515818-22516196 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 229 |
| Conread position: | 196-417 |
| Cow position: | chr1:85152041-85152268 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 196-569 |
| Cow position: | chr1:57120292-57119919 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 6 |
| Conread position: | 197-328 |
| Cow position: | chr1:69247495-69247627 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 96 |
| Conread position: | 197-569 |
| Cow position: | chr1:33442650-33442287 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 198-563 |
| Cow position: | chr1:20078620-20078256 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 199-566 |
| Cow position: | chr1:66685013-66684655 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 166, 39 |
| Conread position: | 199-571 |
| Cow position: | chr1:98789390-98789766 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 202-562 |
| Cow position: | chr1:86020801-86020449 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 202-570 |
| Cow position: | chr1:71332530-71332169 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 209-569 |
| Cow position: | chr1:2465381-2465023 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 167 |
| Conread position: | 217-565 |
| Cow position: | chr1:14528907-14528559 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 221-565 |
| Cow position: | chr1:62141086-62140753 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 235-571 |
| Cow position: | chr1:61591457-61591128 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 96, 123 |
| Conread position: | 248-569 |
| Cow position: | chr1:42317033-42316715 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 145 |
| Conread position: | 308-564 |
| Cow position: | chr1:31399839-31399583 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 12 |
Show alignments to all cow chromosomes.