Cow genome map

Conread name: rpigcf0_003029.y1

Conread position: 1-120
Cow position: chr10:13927726-13927849 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 1-161
Cow position: chr10:51223137-51222978 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 115

Conread position: 1-185
Cow position: chr10:27749665-27749848 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 63

Conread position: 1-189
Cow position: chr10:28670825-28670635 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 100

Conread position: 1-190
Cow position: chr10:26209255-26209068 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 116

Conread position: 1-190
Cow position: chr10:38241989-38241801 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 92

Conread position: 1-192
Cow position: chr10:31791267-31791073 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 1-192
Cow position: chr10:57142223-57142038 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 101

Conread position: 1-193
Cow position: chr10:14538431-14538240 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 90

Conread position: 1-193
Cow position: chr10:52069492-52069290 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 1-194
Cow position: chr10:2694957-2695155 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 77

Conread position: 1-194
Cow position: chr10:49947888-49947688 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 1-197
Cow position: chr10:17388832-17389026 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 77

Conread position: 1-200
Cow position: chr10:19394578-19394392 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 1-200
Cow position: chr10:23127994-23127807 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 97

Conread position: 1-200
Cow position: chr10:30455841-30455631 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 30

Conread position: 1-201
Cow position: chr10:25913801-25913606 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 1-204
Cow position: chr10:4197970-4198182 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 20

Conread position: 1-204
Cow position: chr10:39228140-39228342 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 116

Conread position: 1-204
Cow position: chr10:40563375-40563586 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 1-204
Cow position: chr10:50016005-50015795 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 27, 0

Conread position: 1-204
Cow position: chr10:53405465-53405682 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 1-205
Cow position: chr10:6516690-6516882 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 23

Conread position: 1-205
Cow position: chr10:24831091-24830892 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 103

Conread position: 1-205
Cow position: chr10:32127755-32127960 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 99

Conread position: 1-205
Cow position: chr10:42230785-42230984 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 30, 91

Conread position: 1-207
Cow position: chr10:50200991-50201201 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 132

Conread position: 1-208
Cow position: chr10:705003-704805 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 92

Conread position: 1-208
Cow position: chr10:8847151-8847354 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 129

Conread position: 1-208
Cow position: chr10:22139786-22139572 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 186

Conread position: 1-208
Cow position: chr10:56080179-56079977 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 58

Conread position: 1-208
Cow position: chr10:63932479-63932269 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 67

Conread position: 1-210
Cow position: chr10:38386246-38386045 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 105, 28

Conread position: 1-211
Cow position: chr10:13315931-13316144 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 151

Conread position: 1-212
Cow position: chr10:9578966-9578742 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 212

Conread position: 1-213
Cow position: chr10:15318877-15319089 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 92

Conread position: 1-221
Cow position: chr10:20505762-20505976 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 1-225
Cow position: chr10:4184188-4184399 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 29, 107

Conread position: 1-226
Cow position: chr10:13311728-13311945 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 195, 28

Conread position: 1-228
Cow position: chr10:2260137-2260358 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 11

Conread position: 1-229
Cow position: chr10:11009402-11009621 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 115

Conread position: 1-231
Cow position: chr10:37822617-37822389 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 116

Conread position: 2-164
Cow position: chr10:20132535-20132377 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 105

Conread position: 2-189
Cow position: chr10:29252159-29252351 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 21

Conread position: 2-189
Cow position: chr10:37785372-37785194 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 80

Conread position: 2-200
Cow position: chr10:32573724-32573927 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 2-200
Cow position: chr10:37442536-37442737 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 2-200
Cow position: chr10:59004341-59004535 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 118

Conread position: 2-203
Cow position: chr10:13384149-13384344 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 2-203
Cow position: chr10:53076107-53076307 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 28, 106

Conread position: 2-204
Cow position: chr10:60960928-60961125 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 115

Conread position: 2-206
Cow position: chr10:32928969-32929166 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 101

Conread position: 2-214
Cow position: chr10:56180557-56180773 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 2-216
Cow position: chr10:60962412-60962626 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 102

Conread position: 2-219
Cow position: chr10:43508993-43509208 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 193

Conread position: 3-175
Cow position: chr10:15293260-15293439 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-175
Cow position: chr10:24902990-24902812 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 3-197
Cow position: chr10:63883933-63884116 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 27, 97

Conread position: 3-200
Cow position: chr10:52061815-52062004 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 46

Conread position: 3-200
Cow position: chr10:56683210-56683011 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 27, 46

Conread position: 3-203
Cow position: chr10:22811063-22810859 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 3-208
Cow position: chr10:47690382-47690580 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 28, 94

Conread position: 3-210
Cow position: chr10:50042597-50042802 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 107

Conread position: 3-212
Cow position: chr10:2985080-2984879 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 97

Conread position: 4-203
Cow position: chr10:62286552-62286742 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 88

Conread position: 5-200
Cow position: chr10:4151535-4151728 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 112

Conread position: 5-209
Cow position: chr10:24732300-24732503 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 95

Conread position: 5-213
Cow position: chr10:3362623-3362837 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 6-194
Cow position: chr10:668863-669051 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 122

Conread position: 6-197
Cow position: chr10:48742530-48742338 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 123

Conread position: 7-194
Cow position: chr10:25699648-25699829 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 23, 92

Conread position: 11-172
Cow position: chr10:35795341-35795496 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 106

Conread position: 31-208
Cow position: chr10:68009987-68009810 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 106, 20

Conread position: 38-208
Cow position: chr10:51155062-51155235 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 43

Conread position: 51-204
Cow position: chr10:27583800-27583956 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 51-208
Cow position: chr10:1467932-1468084 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 98-208
Cow position: chr10:39109622-39109512 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 111-301
Cow position: chr10:54948058-54947859 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 7

Conread position: 151-566
Cow position: chr10:1185649-1185237 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 166-566
Cow position: chr10:11304505-11304904 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 27

Conread position: 166-568
Cow position: chr10:32895968-32896377 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 67, 18

Conread position: 166-570
Cow position: chr10:39245628-39245221 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 21

Conread position: 193-534
Cow position: chr10:47591209-47590876 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 49

Conread position: 196-570
Cow position: chr10:50315193-50315569 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 202-541
Cow position: chr10:68015492-68015828 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 162, 38

Conread position: 206-570
Cow position: chr10:58265299-58264930 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 223

Conread position: 228-565
Cow position: chr10:47618654-47618328 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 135, 0

Conread position: 235-563
Cow position: chr10:28775432-28775758 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 130, 60

Conread position: 250-569
Cow position: chr10:33423836-33423523 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 36

Conread position: 354-564
Cow position: chr10:2408477-2408272 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 68

Show alignments to all cow chromosomes.