Cow genome map
Conread name: | rpigcf0_003029.y1 |
Conread position: | 1-113 |
Cow position: | chr17:25122187-25122073 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 91 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-117 |
Cow position: | chr17:11832058-11831940 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-133 |
Cow position: | chr17:34751348-34751215 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 30, 7 |
Conread position: | 1-135 |
Cow position: | chr17:21922577-21922443 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 29, 99 |
Conread position: | 1-141 |
Cow position: | chr17:2275527-2275672 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-148 |
Cow position: | chr17:5743234-5743083 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-169 |
Cow position: | chr17:28814436-28814256 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-181 |
Cow position: | chr17:37430448-37430261 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 141 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 179 |
Conread position: | 1-182 |
Cow position: | chr17:3291129-3291311 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 138 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 1-185 |
Cow position: | chr17:21335507-21335327 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 146 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 18, 100 |
Conread position: | 1-189 |
Cow position: | chr17:10431921-10431736 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 104 |
Conread position: | 1-189 |
Cow position: | chr17:11224161-11224338 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 139 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 1-192 |
Cow position: | chr17:7137036-7137235 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 29, 146 |
Conread position: | 1-193 |
Cow position: | chr17:21788602-21788412 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 29, 128 |
Conread position: | 1-197 |
Cow position: | chr17:4472477-4472277 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 149 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-199 |
Cow position: | chr17:5719928-5720136 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 147 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-199 |
Cow position: | chr17:26231011-26231203 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 29, 100 |
Conread position: | 1-200 |
Cow position: | chr17:10508377-10508195 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 152 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 92 |
Conread position: | 1-200 |
Cow position: | chr17:15340695-15340486 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 30, 179 |
Conread position: | 1-203 |
Cow position: | chr17:9078164-9077971 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 148 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 30, 98 |
Conread position: | 1-203 |
Cow position: | chr17:25141602-25141820 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 157 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 29, 87 |
Conread position: | 1-204 |
Cow position: | chr17:15702413-15702622 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-204 |
Cow position: | chr17:22074441-22074234 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 160 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 29, 153 |
Conread position: | 1-204 |
Cow position: | chr17:25491004-25490798 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-204 |
Cow position: | chr17:40331824-40332023 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 141 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 198, 28 |
Conread position: | 1-204 |
Cow position: | chr17:42697351-42697571 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 155 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-205 |
Cow position: | chr17:25139320-25139519 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 29, 95 |
Conread position: | 1-205 |
Cow position: | chr17:39715217-39715430 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 164 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 29, 48 |
Conread position: | 1-207 |
Cow position: | chr17:20306383-20306580 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 156 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 197, 31 |
Conread position: | 1-207 |
Cow position: | chr17:21680839-21681039 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 1-208 |
Cow position: | chr17:21325389-21325592 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 152 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 25, 99 |
Conread position: | 1-208 |
Cow position: | chr17:32138367-32138169 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 29, 99 |
Conread position: | 1-215 |
Cow position: | chr17:9713285-9713067 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 163 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-216 |
Cow position: | chr17:20856484-20856261 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 164 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 29, 134 |
Conread position: | 1-216 |
Cow position: | chr17:20874453-20874660 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 162 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 29, 98 |
Conread position: | 1-229 |
Cow position: | chr17:15216030-15215792 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 165 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 29, 144 |
Conread position: | 1-236 |
Cow position: | chr17:17410350-17410573 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 176 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 30, 116 |
Conread position: | 1-249 |
Cow position: | chr17:19898947-19899185 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 29, 104 |
Conread position: | 2-194 |
Cow position: | chr17:6848855-6849059 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 100, 27 |
Conread position: | 2-201 |
Cow position: | chr17:32553995-32553810 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 150 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 28, 47 |
Conread position: | 2-208 |
Cow position: | chr17:21298501-21298712 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 158 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 28, 143 |
Conread position: | 2-215 |
Cow position: | chr17:27058499-27058295 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 30, 100 |
Conread position: | 3-122 |
Cow position: | chr17:27202987-27202866 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-191 |
Cow position: | chr17:968943-969140 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 148 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 3-205 |
Cow position: | chr17:37816134-37815946 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 28, 75 |
Conread position: | 3-208 |
Cow position: | chr17:25193468-25193247 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-211 |
Cow position: | chr17:3067800-3067585 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 149 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 173 |
Conread position: | 3-230 |
Cow position: | chr17:8823371-8823590 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 159 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 27, 97 |
Conread position: | 3-241 |
Cow position: | chr17:5900428-5900660 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 165 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 42 |
Conread position: | 4-208 |
Cow position: | chr17:21738814-21738618 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 151 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 26, 113 |
Conread position: | 5-200 |
Cow position: | chr17:9487354-9487558 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 5-200 |
Cow position: | chr17:11921104-11920923 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 147 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 26, 44 |
Conread position: | 5-208 |
Cow position: | chr17:40394069-40394267 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 25, 45 |
Conread position: | 6-194 |
Cow position: | chr17:6566543-6566717 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 25, 65 |
Conread position: | 8-200 |
Cow position: | chr17:21372556-21372747 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 139 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 22, 95 |
Conread position: | 11-208 |
Cow position: | chr17:26802872-26802680 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 20, 90 |
Conread position: | 15-205 |
Cow position: | chr17:11281029-11280847 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 146 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 15, 92 |
Conread position: | 16-208 |
Cow position: | chr17:31480966-31480783 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 14, 65 |
Conread position: | 20-205 |
Cow position: | chr17:5686039-5685856 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 137 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 10, 82 |
Conread position: | 21-162 |
Cow position: | chr17:27613296-27613443 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 21-208 |
Cow position: | chr17:9854053-9854229 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 10, 73 |
Conread position: | 33-203 |
Cow position: | chr17:31585509-31585681 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 53, 144 |
Conread position: | 34-203 |
Cow position: | chr17:1364690-1364851 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 126 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 79-218 |
Cow position: | chr17:37671635-37671771 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 86, 36 |
Conread position: | 83-203 |
Cow position: | chr17:41912737-41912857 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 18, 26 |
Conread position: | 92-205 |
Cow position: | chr17:10234678-10234561 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 7, 27 |
Conread position: | 98-225 |
Cow position: | chr17:24766786-24766657 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 198-553 |
Cow position: | chr17:6081856-6082221 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 249 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 122, 229 |
Conread position: | 202-568 |
Cow position: | chr17:12477238-12477599 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 42 |
Conread position: | 204-569 |
Cow position: | chr17:20508224-20507854 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 253 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 12, 121 |
Conread position: | 213-545 |
Cow position: | chr17:30413336-30413668 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 75 |
Conread position: | 235-565 |
Cow position: | chr17:20591565-20591897 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 199 |
Conread position: | 259-566 |
Cow position: | chr17:13237345-13237043 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 149 |
Conread position: | 279-563 |
Cow position: | chr17:6967575-6967296 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 203 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 88, 49 |
Show alignments to all cow chromosomes.