Cow genome map

Conread name: rpigcf0_003029.y1

Conread position: 1-106
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-113
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-122
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 1-136
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 106

Conread position: 1-143
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 28

Conread position: 1-146
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 1-163
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 77

Conread position: 1-164
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 107

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 1-182
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 66

Conread position: 1-185
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 103

Conread position: 1-185
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 20

Conread position: 1-193
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 87

Conread position: 1-193
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 1-193
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1-194
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 48

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 28

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 97

Conread position: 1-200
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 36

Conread position: 1-200
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 23

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 107

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 98

Conread position: 1-200
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-200
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 177

Conread position: 1-202
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 42

Conread position: 1-202
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 103

Conread position: 1-202
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 48

Conread position: 1-203
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 15

Conread position: 1-204
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 6

Conread position: 1-204
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 126

Conread position: 1-204
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 1-204
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 48

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 101

Conread position: 1-205
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 178

Conread position: 1-205
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 181

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 116

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 77

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 93

Conread position: 1-207
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 127

Conread position: 1-208
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 99

Conread position: 1-208
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 99

Conread position: 1-208
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 167

Conread position: 1-208
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 101

Conread position: 1-210
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 15

Conread position: 1-213
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 153

Conread position: 1-215
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 100

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 99

Conread position: 1-215
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 48

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 67

Conread position: 1-217
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 99

Conread position: 1-219
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 13

Conread position: 1-227
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 66

Conread position: 1-256
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 48

Conread position: 2-164
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 2-200
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 2-200
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 2-204
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 47

Conread position: 2-206
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 90

Conread position: 2-206
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 69

Conread position: 3-113
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-123
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 97

Conread position: 3-148
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 3-164
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 97

Conread position: 3-193
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-197
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 98

Conread position: 3-204
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 12

Conread position: 3-204
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 53

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 46

Conread position: 3-208
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 46

Conread position: 3-209
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 105

Conread position: 3-215
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 105

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 17

Conread position: 3-216
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 33

Conread position: 3-242
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 4-200
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 93, 9

Conread position: 4-204
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 4-204
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 104

Conread position: 4-215
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 9

Conread position: 4-224
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 112

Conread position: 5-197
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 113

Conread position: 5-200
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 76

Conread position: 5-205
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 67

Conread position: 5-208
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 60

Conread position: 5-208
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 102

Conread position: 5-208
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 5-209
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 26, 123

Conread position: 5-211
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 209

Conread position: 5-217
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 217

Conread position: 6-208
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 26

Conread position: 7-205
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 97

Conread position: 11-199
Cow position:
Alignm length: 191
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 105

Conread position: 13-199
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 78

Conread position: 15-211
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 17-206
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 77

Conread position: 27-208
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 14

Conread position: 29-206
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 169, 76

Conread position: 29-207
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 30-200
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 30-214
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 143, 85

Conread position: 51-205
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 76-208
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 29

Conread position: 97-215
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 98-199
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 119-513
Cow position:
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 74

Conread position: 119-570
Cow position:
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 311

Conread position: 181-569
Cow position:
Alignm length: 393
Alignm identity: 261
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 182, 100

Conread position: 196-386
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 168, 20

Conread position: 199-570
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 89

Conread position: 201-569
Cow position:
Alignm length: 378
Alignm identity: 262
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 32, 92

Conread position: 209-513
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 11

Conread position: 217-543
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 202

Conread position: 223-569
Cow position:
Alignm length: 357
Alignm identity: 253
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 107

Conread position: 259-566
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 72, 31

Conread position: 278-564
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 5

Conread position: 278-569
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 84

Conread position: 336-563
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 86

Show alignments to all cow chromosomes.