Cow genome map
Conread name: | rpigcf0_003029.y1 |
Conread position: | 1-111 |
Cow position: | chr20:13652308-13652196 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 90 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-132 |
Cow position: | chr20:11444137-11444273 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 98, 28 |
Conread position: | 1-164 |
Cow position: | chr20:40157959-40158134 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 128 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 1-181 |
Cow position: | chr20:42451205-42451389 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 28, 142 |
Conread position: | 1-189 |
Cow position: | chr20:9267045-9266870 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 141 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 30, 52 |
Conread position: | 1-190 |
Cow position: | chr20:10772265-10772462 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 145 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 34, 25 |
Conread position: | 1-199 |
Cow position: | chr20:5078686-5078876 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 145 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 29, 91 |
Conread position: | 1-201 |
Cow position: | chr20:33438921-33438714 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 156 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-203 |
Cow position: | chr20:15589102-15589308 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 147 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 30, 194 |
Conread position: | 1-205 |
Cow position: | chr20:7622922-7622726 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 152 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 29, 51 |
Conread position: | 1-205 |
Cow position: | chr20:20056426-20056209 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 154 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 1-205 |
Cow position: | chr20:36842635-36842833 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 29, 51 |
Conread position: | 1-208 |
Cow position: | chr20:7709722-7709502 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 164 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-208 |
Cow position: | chr20:11043413-11043211 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 145 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 1-208 |
Cow position: | chr20:20739228-20739025 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 148 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 29, 128 |
Conread position: | 1-208 |
Cow position: | chr20:21325385-21325575 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 159 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 30, 48 |
Conread position: | 1-208 |
Cow position: | chr20:23870760-23870548 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 162 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 29, 207 |
Conread position: | 1-209 |
Cow position: | chr20:19328447-19328648 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 29, 77 |
Conread position: | 1-209 |
Cow position: | chr20:38514838-38515039 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 29, 75 |
Conread position: | 1-221 |
Cow position: | chr20:24902234-24902011 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 148 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-227 |
Cow position: | chr20:8021185-8021404 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 31, 100 |
Conread position: | 1-231 |
Cow position: | chr20:2822929-2823152 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 167 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 30, 107 |
Conread position: | 1-234 |
Cow position: | chr20:12995946-12995719 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 174 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 29, 46 |
Conread position: | 1-287 |
Cow position: | chr20:38670809-38671098 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 189 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 29, 91 |
Conread position: | 2-137 |
Cow position: | chr20:39728510-39728649 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 54 |
Conread position: | 2-157 |
Cow position: | chr20:41274838-41274676 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 2-199 |
Cow position: | chr20:30027409-30027614 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 152 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 28, 10 |
Conread position: | 2-200 |
Cow position: | chr20:9923628-9923832 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 28, 15 |
Conread position: | 2-210 |
Cow position: | chr20:15846815-15847032 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 157 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 28, 183 |
Conread position: | 2-211 |
Cow position: | chr20:36779669-36779467 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 29, 46 |
Conread position: | 3-117 |
Cow position: | chr20:19751368-19751485 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 93 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-132 |
Cow position: | chr20:17846020-17846151 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 116 |
Conread position: | 3-169 |
Cow position: | chr20:23064769-23064604 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 120 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 94, 18 |
Conread position: | 3-200 |
Cow position: | chr20:6890775-6890984 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 148 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 3-200 |
Cow position: | chr20:23936123-23935937 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 27, 58 |
Conread position: | 3-204 |
Cow position: | chr20:580859-580652 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-204 |
Cow position: | chr20:15760512-15760323 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 46 |
Conread position: | 3-208 |
Cow position: | chr20:5827001-5827213 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 147 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-215 |
Cow position: | chr20:38551433-38551633 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 150 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 4-210 |
Cow position: | chr20:21714818-21715041 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 159 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 6-123 |
Cow position: | chr20:15515376-15515257 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 7-208 |
Cow position: | chr20:15547255-15547466 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 151 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 8-203 |
Cow position: | chr20:37229018-37228823 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 153 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 22, 141 |
Conread position: | 10-212 |
Cow position: | chr20:16977776-16977584 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 20, 77 |
Conread position: | 12-205 |
Cow position: | chr20:3588707-3588906 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 145 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 18, 126 |
Conread position: | 15-225 |
Cow position: | chr20:36633886-36634099 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 15, 170 |
Conread position: | 20-193 |
Cow position: | chr20:26790533-26790366 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 136 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 10, 88 |
Conread position: | 20-227 |
Cow position: | chr20:10052812-10053013 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 10, 29 |
Conread position: | 51-208 |
Cow position: | chr20:15199077-15199229 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 145, 64 |
Conread position: | 79-203 |
Cow position: | chr20:18659200-18659077 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 83-212 |
Cow position: | chr20:24310821-24310688 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 99-227 |
Cow position: | chr20:2721674-2721800 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 106-547 |
Cow position: | chr20:27063231-27063663 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 289 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 18, 33 |
Conread position: | 188-481 |
Cow position: | chr20:25656836-25657127 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 179 |
Conread position: | 196-569 |
Cow position: | chr20:9007282-9006903 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 266 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 39, 216 |
Conread position: | 197-529 |
Cow position: | chr20:14472896-14472569 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 238 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 41, 224 |
Conread position: | 202-569 |
Cow position: | chr20:7110801-7110435 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 226 |
Conread position: | 210-565 |
Cow position: | chr20:28141305-28141661 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 147 |
Conread position: | 249-569 |
Cow position: | chr20:24534084-24534410 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 228 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 116, 215 |
Conread position: | 310-569 |
Cow position: | chr20:12551847-12552106 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 183 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 58, 101 |
Show alignments to all cow chromosomes.