Cow genome map


           Conread name:
           rpigcf0_003029.y1
        

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-128
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 111
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 81
               

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               150, 28
               

               Conread position:
               1-163
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 28
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 148
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 127
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 173
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               29, 114
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 116
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 28
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               96, 25
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               31, 116
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               29, 138
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               2-134
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-135
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               2-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               3-149
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-189
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 175
               

               Conread position:
               3-204
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               196, 28
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               111, 26
               

               Conread position:
               4-189
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               4-197
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               4-200
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 162
               

               Conread position:
               4-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               6-231
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               11-205
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               11-208
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               24-231
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               96, 80
               

               Conread position:
               39-200
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               99, 134
               

               Conread position:
               82-205
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               99-454
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 53
               

               Conread position:
               119-570
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 303
               

               Conread position:
               166-569
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               179-570
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 148
               

               Conread position:
               199-541
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 223
               

               Conread position:
               200-569
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               202-569
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 193
               

               Conread position:
               202-570
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 229
               

               Conread position:
               217-336
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               217-569
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 209
               

               Conread position:
               228-569
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 18
               
Show alignments to all cow chromosomes.