Cow genome map


           Conread name:
           rpigcf0_003029.y1
        

               Conread position:
               1-109
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-113
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               1-191
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 94
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 56
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               155, 14
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 83
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 136
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               26, 123
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               29, 117
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 104
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 182
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               172, 97
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               2-193
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               28, 35
               

               Conread position:
               2-206
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               2-267
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               3-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 115
               

               Conread position:
               3-149
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               3-193
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               3-202
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 89
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 74
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               4-148
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               51, 103
               

               Conread position:
               4-172
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               5-194
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               31, 93
               

               Conread position:
               6-204
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 178
               

               Conread position:
               7-134
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               9-200
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               9-205
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               16-197
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 174
               

               Conread position:
               33-201
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 152
               

               Conread position:
               188-482
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               192-421
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               196-566
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               48, 85
               

               Conread position:
               235-569
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               130, 79
               

               Conread position:
               261-571
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 165
               

               Conread position:
               295-569
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 111
               

               Conread position:
               329-569
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               37, 99
               
Show alignments to all cow chromosomes.