Cow genome map


           Conread name:
           rpigcf0_003029.y1
        

               Conread position:
               1-111
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-114
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               1-181
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 104
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               30, 116
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 171
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 28
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               29, 63
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               29, 180
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 110
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               29, 197
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 201
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               202, 14
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               2-193
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 98
               

               Conread position:
               2-200
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               2-214
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               96, 27
               

               Conread position:
               2-214
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 115
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 115
               

               Conread position:
               2-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               3-185
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               3-189
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               137, 13
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 98
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               4-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               5-204
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 206
               

               Conread position:
               5-205
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 94
               

               Conread position:
               6-164
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               6-197
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               6-201
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 95
               

               Conread position:
               7-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               23, 131
               

               Conread position:
               8-200
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               8-203
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               8-225
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               9-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               10-200
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               12-187
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               15-205
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               15-208
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               15, 94
               

               Conread position:
               16-203
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               20-191
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 81
               

               Conread position:
               23-135
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               24-205
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 29
               

               Conread position:
               29-239
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               51-203
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               51-205
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               78-200
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               120, 12
               

               Conread position:
               98-214
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               120-318
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               127-385
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               80, 119
               

               Conread position:
               151-347
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               165-319
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               170-510
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 20
               

               Conread position:
               193-567
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               42, 115
               

               Conread position:
               193-569
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 237
               

               Conread position:
               196-335
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 50
               

               Conread position:
               196-554
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 238
               

               Conread position:
               196-569
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 101
               

               Conread position:
               198-569
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 65
               

               Conread position:
               202-383
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               202-569
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               202-570
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 251
               

               Conread position:
               209-569
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               210-571
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               21, 220
               

               Conread position:
               216-570
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               217-569
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               219-566
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               14, 189
               

               Conread position:
               235-563
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               79, 142
               

               Conread position:
               250-571
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               117, 5
               

               Conread position:
               259-571
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               106, 53
               

               Conread position:
               291-569
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               81, 116
               
Show alignments to all cow chromosomes.