Cow genome map


           Conread name:
           rpigcf0_003029.y1
        

               Conread position:
               1-120
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-122
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 116
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               6, 20
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 135
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               195, 27
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 89
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               197, 31
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               30, 87
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 184
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               2-120
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 98
               

               Conread position:
               2-135
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-135
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               2-189
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               28, 98
               

               Conread position:
               2-198
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               28, 179
               

               Conread position:
               2-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               2-212
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               3-135
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-149
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               27, 85
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               3-185
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               3-197
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 97
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               5-189
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 103
               

               Conread position:
               5-199
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               5-200
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 72
               

               Conread position:
               5-215
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               6-206
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 94
               

               Conread position:
               8-208
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               9-197
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               12-208
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               13-212
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               14-208
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               15-188
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               17-208
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               18-223
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               29-202
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               171, 86
               

               Conread position:
               30-205
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               87, 125
               

               Conread position:
               37-209
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               161, 61
               

               Conread position:
               51-198
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               54-193
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               76-212
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               80-204
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               91-569
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 12
               

               Conread position:
               93-280
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 12
               

               Conread position:
               179-570
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               185, 23
               

               Conread position:
               188-565
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 150
               

               Conread position:
               188-569
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 227
               

               Conread position:
               195-569
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               196-566
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 226
               

               Conread position:
               199-569
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 106
               

               Conread position:
               202-562
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               218-569
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 211
               

               Conread position:
               234-569
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               79, 147
               

               Conread position:
               235-569
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               133, 153
               

               Conread position:
               253-568
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               291, 66
               

               Conread position:
               270-566
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               92, 156
               

               Conread position:
               289-566
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               72, 21
               
Show alignments to all cow chromosomes.