Cow genome map


           Conread name:
           rpigcf0_003029.y1
        

               Conread position:
               1-113
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-130
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 115
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 125
               

               Conread position:
               1-179
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               1-182
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               29, 118
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 120
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               1-189
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 69
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               29, 69
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               27, 94
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               97, 28
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               29, 223
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 94
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               2-113
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-192
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               111, 27
               

               Conread position:
               2-193
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               2-195
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               2-200
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               2-200
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               2-231
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               3-194
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               27, 118
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 46
               

               Conread position:
               3-204
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               28, 109
               

               Conread position:
               3-204
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               27, 85
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               4-128
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               4-194
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               5-194
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               5-198
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               25, 102
               

               Conread position:
               5-208
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 94
               

               Conread position:
               6-194
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 93
               

               Conread position:
               6-200
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 66
               

               Conread position:
               6-205
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               8-205
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               11-200
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               14-205
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               15-199
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               15-203
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               20-200
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               21-202
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               24-570
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               363
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               29-221
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               171, 86
               

               Conread position:
               31-208
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               31-215
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               34-205
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               91, 159
               

               Conread position:
               39-201
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               40-205
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               56-203
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-209
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               94-210
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               98-231
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               98-231
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               100-420
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               239, 23
               

               Conread position:
               103-565
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               312
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 65
               

               Conread position:
               162-400
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               165-569
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               167-369
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 11
               

               Conread position:
               193-565
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 47
               

               Conread position:
               196-513
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               165, 212
               

               Conread position:
               198-569
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               32, 198
               

               Conread position:
               203-567
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               209-444
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               210-565
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               245-565
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               79, 146
               

               Conread position:
               337-569
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               25, 89
               
Show alignments to all cow chromosomes.