Cow genome map

Conread name: rpigcf0_003029.y1

Conread position: 1-113
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-116
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 60

Conread position: 1-135
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-141
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 116

Conread position: 1-154
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 83

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-156
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 133

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 99

Conread position: 1-197
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 108

Conread position: 1-198
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 86

Conread position: 1-198
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 169

Conread position: 1-199
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 48

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 91

Conread position: 1-200
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 98

Conread position: 1-200
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 101

Conread position: 1-200
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 1-200
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 104

Conread position: 1-200
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 104

Conread position: 1-203
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 151

Conread position: 1-204
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 1-204
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 11

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 99

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 27

Conread position: 1-205
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 150

Conread position: 1-206
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 53

Conread position: 1-207
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 35

Conread position: 1-208
Cow position:
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 100

Conread position: 1-208
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 116

Conread position: 1-208
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 74

Conread position: 1-208
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 194

Conread position: 1-208
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 103

Conread position: 1-208
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1-215
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 60

Conread position: 1-219
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 11

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 55

Conread position: 1-225
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 191

Conread position: 1-226
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 30, 206

Conread position: 1-232
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 91

Conread position: 1-248
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 77

Conread position: 2-144
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 2-175
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 151, 18

Conread position: 2-203
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 90

Conread position: 2-206
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 97

Conread position: 2-208
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 26

Conread position: 2-227
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 79

Conread position: 3-190
Cow position:
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 79

Conread position: 3-197
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 114

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 64

Conread position: 3-205
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 99

Conread position: 3-205
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 117

Conread position: 4-203
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 25

Conread position: 4-215
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 197

Conread position: 5-193
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 97

Conread position: 5-222
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 83

Conread position: 6-194
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 94

Conread position: 6-197
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 60

Conread position: 9-225
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 107

Conread position: 10-224
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 101

Conread position: 11-208
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 81

Conread position: 11-215
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 66

Conread position: 12-231
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 196

Conread position: 15-201
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 21

Conread position: 15-212
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 108

Conread position: 21-215
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 76

Conread position: 29-211
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 130

Conread position: 34-213
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 165, 65

Conread position: 40-189
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 51-200
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 24

Conread position: 52-205
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 74-569
Cow position:
Alignm length: 499
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 33

Conread position: 98-208
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 99-208
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 116-562
Cow position:
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 119-566
Cow position:
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 352

Conread position: 155-566
Cow position:
Alignm length: 425
Alignm identity: 273
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 73

Conread position: 161-521
Cow position:
Alignm length: 371
Alignm identity: 236
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 72

Conread position: 166-506
Cow position:
Alignm length: 350
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 146

Conread position: 166-566
Cow position:
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 166-569
Cow position:
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 196-566
Cow position:
Alignm length: 377
Alignm identity: 254
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 37, 231

Conread position: 200-569
Cow position:
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 202-545
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 85

Conread position: 202-562
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 148

Conread position: 202-566
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 195

Conread position: 202-569
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 113

Conread position: 202-569
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 105

Conread position: 209-562
Cow position:
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 241

Conread position: 218-563
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 38

Conread position: 219-570
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 28

Conread position: 225-571
Cow position:
Alignm length: 349
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 21

Conread position: 258-566
Cow position:
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 76

Conread position: 305-565
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 121

Conread position: 360-569
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 64

Show alignments to all cow chromosomes.