Cow genome map

Conread name: rpigcf0_003029.y1

Conread position: 1-113
Cow position: chr7:29505173-29505287 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 1-116
Cow position: chr7:33698013-33698131 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 60

Conread position: 1-135
Cow position: chr7:43307233-43307369 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-141
Cow position: chr7:57258965-57258827 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 116

Conread position: 1-154
Cow position: chr7:34005019-34005170 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 83

Conread position: 1-156
Cow position: chr7:3256287-3256129 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1-156
Cow position: chr7:64236203-64236046 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 133

Conread position: 1-197
Cow position: chr7:7476055-7475869 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 99

Conread position: 1-197
Cow position: chr7:13593827-13594012 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 108

Conread position: 1-198
Cow position: chr7:37952237-37952434 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 86

Conread position: 1-198
Cow position: chr7:56012225-56012422 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 169

Conread position: 1-199
Cow position: chr7:8289847-8289652 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 48

Conread position: 1-200
Cow position: chr7:168608-168418 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 91

Conread position: 1-200
Cow position: chr7:9861705-9861514 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1-200
Cow position: chr7:21008876-21008682 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 98

Conread position: 1-200
Cow position: chr7:39800701-39800504 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 101

Conread position: 1-200
Cow position: chr7:58923456-58923669 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 1-200
Cow position: chr7:68885497-68885702 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 104

Conread position: 1-200
Cow position: chr7:68898359-68898564 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 104

Conread position: 1-203
Cow position: chr7:29709671-29709465 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 151

Conread position: 1-204
Cow position: chr7:23636764-23636954 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 1-204
Cow position: chr7:54054647-54054841 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 11

Conread position: 1-205
Cow position: chr7:17713413-17713217 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 99

Conread position: 1-205
Cow position: chr7:19095918-19095715 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 27

Conread position: 1-205
Cow position: chr7:23640846-23640638 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 150

Conread position: 1-206
Cow position: chr7:21713977-21713768 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 53

Conread position: 1-207
Cow position: chr7:22651769-22651562 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 35

Conread position: 1-208
Cow position: chr7:9136896-9137096 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 100

Conread position: 1-208
Cow position: chr7:11015740-11015947 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 29, 116

Conread position: 1-208
Cow position: chr7:26861380-26861590 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 74

Conread position: 1-208
Cow position: chr7:46021939-46021729 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 194

Conread position: 1-208
Cow position: chr7:55060322-55060516 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 103

Conread position: 1-208
Cow position: chr7:63968133-63967935 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1-215
Cow position: chr7:40067719-40067935 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 60

Conread position: 1-219
Cow position: chr7:36774426-36774660 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 11

Conread position: 1-221
Cow position: chr7:42593220-42593003 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 55

Conread position: 1-225
Cow position: chr7:24461009-24461232 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 191

Conread position: 1-226
Cow position: chr7:17816807-17817036 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 30, 206

Conread position: 1-232
Cow position: chr7:31694581-31694359 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 91

Conread position: 1-248
Cow position: chr7:42431918-42432166 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 29, 77

Conread position: 2-144
Cow position: chr7:64364469-64364321 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 2-175
Cow position: chr7:28095933-28096103 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 151, 18

Conread position: 2-203
Cow position: chr7:59149567-59149756 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 90

Conread position: 2-206
Cow position: chr7:50566142-50565948 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 97

Conread position: 2-208
Cow position: chr7:55688135-55687932 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 26

Conread position: 2-227
Cow position: chr7:20176649-20176417 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 79

Conread position: 3-190
Cow position: chr7:36278359-36278544 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 79

Conread position: 3-197
Cow position: chr7:53653043-53653232 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 114

Conread position: 3-205
Cow position: chr7:37498133-37497943 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 64

Conread position: 3-205
Cow position: chr7:39129548-39129356 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 99

Conread position: 3-205
Cow position: chr7:44454220-44454022 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 117

Conread position: 4-203
Cow position: chr7:42472143-42472342 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 25

Conread position: 4-215
Cow position: chr7:61551981-61552192 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 197

Conread position: 5-193
Cow position: chr7:52382916-52382724 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 97

Conread position: 5-222
Cow position: chr7:41464529-41464748 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 25, 83

Conread position: 6-194
Cow position: chr7:44094658-44094479 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 94

Conread position: 6-197
Cow position: chr7:5853412-5853601 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 60

Conread position: 9-225
Cow position: chr7:1783151-1782934 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 21, 107

Conread position: 10-224
Cow position: chr7:61663252-61663472 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 101

Conread position: 11-208
Cow position: chr7:40952797-40952599 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 81

Conread position: 11-215
Cow position: chr7:34422203-34421997 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 19, 66

Conread position: 12-231
Cow position: chr7:9800422-9800648 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 196

Conread position: 15-201
Cow position: chr7:2816334-2816520 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 21

Conread position: 15-212
Cow position: chr7:39838810-39838611 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 16, 108

Conread position: 21-215
Cow position: chr7:11978318-11978506 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 76

Conread position: 29-211
Cow position: chr7:56423432-56423244 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 130

Conread position: 34-213
Cow position: chr7:40656390-40656217 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 165, 65

Conread position: 40-189
Cow position: chr7:57233628-57233482 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 51-200
Cow position: chr7:11944783-11944934 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 24

Conread position: 52-205
Cow position: chr7:46867402-46867560 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 74-569
Cow position: chr7:48860286-48859820 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 33

Conread position: 98-208
Cow position: chr7:58926256-58926367 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 99-208
Cow position: chr7:1804586-1804477 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 116-562
Cow position: chr7:48337554-48337119 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 119-566
Cow position: chr7:48548688-48548225 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 352

Conread position: 155-566
Cow position: chr7:25222874-25223281 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 273
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 73

Conread position: 161-521
Cow position: chr7:20806427-20806783 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 236
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 72

Conread position: 166-506
Cow position: chr7:51056-50715 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 23, 146

Conread position: 166-566
Cow position: chr7:20105732-20105340 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 166-569
Cow position: chr7:22049531-22049132 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 196-566
Cow position: chr7:65849745-65849376 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 37, 231

Conread position: 200-569
Cow position: chr7:47876467-47876098 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 131

Conread position: 202-545
Cow position: chr7:3808569-3808898 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 85

Conread position: 202-562
Cow position: chr7:65329861-65329501 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 148

Conread position: 202-566
Cow position: chr7:48814948-48815309 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 29, 195

Conread position: 202-569
Cow position: chr7:18964244-18964610 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 113

Conread position: 202-569
Cow position: chr7:61462401-61462033 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 105

Conread position: 209-562
Cow position: chr7:26803130-26802769 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 241

Conread position: 218-563
Cow position: chr7:26829210-26828858 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 38

Conread position: 219-570
Cow position: chr7:68870026-68870369 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 28

Conread position: 225-571
Cow position: chr7:56671629-56671290 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 21

Conread position: 258-566
Cow position: chr7:61621829-61621521 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 81, 76

Conread position: 305-565
Cow position: chr7:36477273-36477532 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 121

Conread position: 360-569
Cow position: chr7:20289775-20289569 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 64

Show alignments to all cow chromosomes.