Cow genome map


           Conread name:
           rpigcf0_003029.y1
        

               Conread position:
               1-110
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-128
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-130
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-132
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 110
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 111
               

               Conread position:
               1-143
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               32, 99
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               134, 20
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-200
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 99
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               149, 13
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 153
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 76
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 219
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 127
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               1-498
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               2-190
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               2-200
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 97
               

               Conread position:
               2-203
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               2-204
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               2-234
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               3-190
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               27, 135
               

               Conread position:
               3-197
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 171
               

               Conread position:
               3-199
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-201
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 107
               

               Conread position:
               3-204
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 89
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               196, 26
               

               Conread position:
               3-209
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               24, 100
               

               Conread position:
               3-219
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               3-569
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 255
               

               Conread position:
               4-204
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               195, 25
               

               Conread position:
               5-208
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               6-207
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               8-219
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               10-198
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               10-204
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               13-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               15-203
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               16-189
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               30-184
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               30-200
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               40-197
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               98-208
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               165-570
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 194
               

               Conread position:
               166-326
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               196-565
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               196-568
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               35, 242
               

               Conread position:
               199-480
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               164, 191
               

               Conread position:
               202-358
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               202-568
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               202-569
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 167
               

               Conread position:
               202-569
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 35
               

               Conread position:
               218-563
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               290-569
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               5, 104
               

               Conread position:
               344-566
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 12
               
Show alignments to all cow chromosomes.