Cow genome map

Conread name: rpigcf0_003055.y1

Conread position: 1-561
Cow position: chr20:20967006-20967553 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 18

Conread position: 8-426
Cow position: chr20:12155446-12155039 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 12

Conread position: 8-483
Cow position: chr20:23065180-23064691 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 13

Conread position: 8-505
Cow position: chr20:4621684-4621187 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 18

Conread position: 8-508
Cow position: chr20:17845611-17846125 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 13

Conread position: 11-475
Cow position: chr20:28956007-28955565 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 10

Conread position: 17-455
Cow position: chr20:22313496-22313044 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 191

Conread position: 19-281
Cow position: chr20:4893247-4892962 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 107, 202

Conread position: 19-291
Cow position: chr20:23849958-23850233 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 161, 68

Conread position: 19-410
Cow position: chr20:18100085-18100478 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 185

Conread position: 19-468
Cow position: chr20:34001723-34001261 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 30

Conread position: 19-476
Cow position: chr20:7110452-7109984 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 149

Conread position: 19-483
Cow position: chr20:9536803-9537276 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 99

Conread position: 19-485
Cow position: chr20:26076754-26077229 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 104

Conread position: 19-492
Cow position: chr20:33363180-33363671 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 194

Conread position: 19-506
Cow position: chr20:10818558-10818070 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 339
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 30

Conread position: 19-521
Cow position: chr20:6423634-6424143 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 33

Conread position: 19-524
Cow position: chr20:13877043-13876516 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 189

Conread position: 19-546
Cow position: chr20:8429417-8429958 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 33

Conread position: 19-557
Cow position: chr20:32847019-32847572 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 23

Conread position: 19-558
Cow position: chr20:12420972-12420388 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 205

Conread position: 19-558
Cow position: chr20:20983691-20984228 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 125

Conread position: 19-558
Cow position: chr20:40256651-40257181 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 77

Conread position: 19-567
Cow position: chr20:13269293-13269854 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 57

Conread position: 19-569
Cow position: chr20:19363695-19363145 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 44

Conread position: 19-582
Cow position: chr20:4945579-4944995 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 19-587
Cow position: chr20:746626-747190 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 120

Conread position: 19-590
Cow position: chr20:14806551-14807148 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 91

Conread position: 20-254
Cow position: chr20:15117712-15117959 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 129

Conread position: 20-415
Cow position: chr20:22445970-22445571 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 282
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 70, 149

Conread position: 21-470
Cow position: chr20:5576428-5576906 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 153

Conread position: 21-513
Cow position: chr20:11550034-11550547 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 259

Conread position: 22-239
Cow position: chr20:34900494-34900714 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 88

Conread position: 22-243
Cow position: chr20:20546294-20546514 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 70, 165

Conread position: 22-304
Cow position: chr20:3501963-3502259 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 154, 185

Conread position: 22-389
Cow position: chr20:27339732-27340112 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 148

Conread position: 22-398
Cow position: chr20:31077205-31077611 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 281
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 72, 77

Conread position: 22-404
Cow position: chr20:20732158-20732534 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 171, 192

Conread position: 22-410
Cow position: chr20:17903828-17904229 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 82

Conread position: 22-430
Cow position: chr20:9473944-9473520 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 81

Conread position: 22-459
Cow position: chr20:16715073-16715512 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 74

Conread position: 22-488
Cow position: chr20:6096815-6096348 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 18

Conread position: 22-488
Cow position: chr20:40423421-40422956 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 157

Conread position: 22-506
Cow position: chr20:581258-580753 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 27

Conread position: 22-508
Cow position: chr20:19750981-19751476 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 75

Conread position: 22-521
Cow position: chr20:20202885-20203403 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 258

Conread position: 22-524
Cow position: chr20:22959674-22959153 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 72

Conread position: 22-529
Cow position: chr20:25658120-25657649 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 160

Conread position: 22-552
Cow position: chr20:30817205-30817746 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 109

Conread position: 22-567
Cow position: chr20:3599722-3599162 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 21

Conread position: 22-567
Cow position: chr20:33531979-33532530 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 82

Conread position: 22-584
Cow position: chr20:4756153-4755579 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 99

Conread position: 22-595
Cow position: chr20:36780060-36779451 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 22

Conread position: 22-608
Cow position: chr20:29844714-29845323 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 195

Conread position: 23-393
Cow position: chr20:26469408-26469009 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 197

Conread position: 23-408
Cow position: chr20:18185249-18185635 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 184

Conread position: 23-552
Cow position: chr20:9433275-9433807 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 27

Conread position: 23-587
Cow position: chr20:35145676-35146273 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 188

Conread position: 24-392
Cow position: chr20:24391672-24392031 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 23

Conread position: 24-557
Cow position: chr20:33170201-33169642 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 100

Conread position: 28-389
Cow position: chr20:27314349-27314719 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 185

Conread position: 28-477
Cow position: chr20:24398956-24398508 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 26

Conread position: 28-483
Cow position: chr20:40781652-40782105 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 91

Conread position: 28-507
Cow position: chr20:18392564-18392103 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 83

Conread position: 29-473
Cow position: chr20:9126413-9126870 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 306
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 147, 94

Conread position: 30-475
Cow position: chr20:12996332-12995870 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 178

Conread position: 30-600
Cow position: chr20:19236768-19237340 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 70

Conread position: 33-558
Cow position: chr20:33435482-33434928 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 90

Conread position: 33-579
Cow position: chr20:34597435-34596851 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 385
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 83, 56

Conread position: 34-556
Cow position: chr20:6054822-6054278 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 19

Conread position: 34-558
Cow position: chr20:17251392-17251950 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 170

Conread position: 35-326
Cow position: chr20:13501618-13501915 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 147, 94

Conread position: 36-308
Cow position: chr20:4781235-4781533 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 181

Conread position: 36-561
Cow position: chr20:7549941-7550468 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 84

Conread position: 38-512
Cow position: chr20:21371986-21372487 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 184

Conread position: 40-393
Cow position: chr20:24002016-24002369 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 83

Conread position: 40-558
Cow position: chr20:21345089-21345670 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 171

Conread position: 43-419
Cow position: chr20:31261423-31261805 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 123

Conread position: 44-330
Cow position: chr20:16291170-16291463 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 123, 84

Conread position: 44-372
Cow position: chr20:18399452-18399798 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 122

Conread position: 44-569
Cow position: chr20:5998984-5998419 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 382
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 7, 174

Conread position: 45-496
Cow position: chr20:35797299-35797767 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 23

Conread position: 47-558
Cow position: chr20:42469463-42469976 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 54-556
Cow position: chr20:34202349-34202871 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 5

Conread position: 54-577
Cow position: chr20:13751947-13752463 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 76

Conread position: 57-571
Cow position: chr20:6240825-6240276 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 152

Conread position: 62-558
Cow position: chr20:7426480-7425967 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 21

Conread position: 63-390
Cow position: chr20:15761237-15760899 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 68

Conread position: 63-508
Cow position: chr20:39728161-39728620 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 67

Conread position: 63-558
Cow position: chr20:12582237-12581725 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 11

Conread position: 78-508
Cow position: chr20:21714477-21714931 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 50

Conread position: 80-424
Cow position: chr20:20201719-20202077 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 117

Conread position: 80-472
Cow position: chr20:31464651-31464244 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 96, 47

Conread position: 81-410
Cow position: chr20:7132076-7132420 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 102, 126

Conread position: 81-483
Cow position: chr20:10178382-10177938 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 80, 41

Conread position: 82-445
Cow position: chr20:35958378-35958754 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 74

Conread position: 87-601
Cow position: chr20:7659475-7658944 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 65

Conread position: 88-558
Cow position: chr20:14759929-14759443 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 42

Conread position: 90-425
Cow position: chr20:13967522-13967170 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 118

Conread position: 90-476
Cow position: chr20:35999425-35999830 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 85, 116

Conread position: 91-405
Cow position: chr20:24521489-24521814 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 116

Conread position: 91-557
Cow position: chr20:12205972-12205514 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 31

Conread position: 94-584
Cow position: chr20:5950888-5950382 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 29

Conread position: 97-558
Cow position: chr20:25686609-25686135 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 25, 33

Conread position: 102-483
Cow position: chr20:40127587-40127199 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 106

Conread position: 103-594
Cow position: chr20:22235062-22235563 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 107

Conread position: 107-462
Cow position: chr20:3607197-3606838 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 50

Conread position: 114-558
Cow position: chr20:10200102-10200580 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 173

Conread position: 115-558
Cow position: chr20:6903091-6903525 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 306
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 54

Conread position: 116-409
Cow position: chr20:21016243-21016553 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 38

Conread position: 122-508
Cow position: chr20:5826703-5827109 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 276
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 88

Conread position: 123-423
Cow position: chr20:10348528-10348835 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 50, 76

Conread position: 125-591
Cow position: chr20:13023707-13023233 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 84

Conread position: 127-606
Cow position: chr20:20359998-20359525 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 314
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 5, 75

Conread position: 128-373
Cow position: chr20:8910699-8910953 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 79

Conread position: 128-389
Cow position: chr20:9988368-9988629 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 39

Conread position: 128-455
Cow position: chr20:41028266-41028605 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 233
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 71

Conread position: 128-556
Cow position: chr20:29805882-29805448 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 22

Conread position: 128-558
Cow position: chr20:35364827-35365249 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 304
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 54, 31

Conread position: 129-558
Cow position: chr20:13829043-13829491 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 53, 27

Conread position: 131-512
Cow position: chr20:35009962-35009562 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 49, 23

Conread position: 131-557
Cow position: chr20:1139995-1139535 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 71

Conread position: 131-560
Cow position: chr20:13652566-13652146 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 134-556
Cow position: chr20:40511976-40511543 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 32

Conread position: 137-390
Cow position: chr20:29633207-29632949 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 76

Conread position: 137-392
Cow position: chr20:5025518-5025251 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 70

Conread position: 137-428
Cow position: chr20:14735461-14735758 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 29

Conread position: 137-464
Cow position: chr20:18551147-18551487 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 64

Conread position: 137-470
Cow position: chr20:39405552-39405891 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 97, 43

Conread position: 137-475
Cow position: chr20:10838435-10838076 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 28

Conread position: 137-508
Cow position: chr20:40185889-40185509 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 68

Conread position: 137-514
Cow position: chr20:6890489-6890891 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 45, 73

Conread position: 137-520
Cow position: chr20:7442340-7441951 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 71

Conread position: 137-524
Cow position: chr20:34776970-34777366 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 70

Conread position: 138-434
Cow position: chr20:22704073-22704390 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 69

Conread position: 139-399
Cow position: chr20:9379195-9379465 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 41, 68

Conread position: 139-498
Cow position: chr20:11482353-11481972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 68

Conread position: 140-393
Cow position: chr20:23936628-23936351 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 60

Conread position: 140-558
Cow position: chr20:38873225-38872768 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 307
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 67

Conread position: 141-390
Cow position: chr20:6848410-6848681 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 33, 65

Conread position: 142-393
Cow position: chr20:32069069-32068798 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 144

Conread position: 142-442
Cow position: chr20:23505618-23505931 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 24

Conread position: 142-488
Cow position: chr20:35907257-35906903 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 40, 24

Conread position: 143-602
Cow position: chr20:34251888-34251396 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 64

Conread position: 145-558
Cow position: chr20:14572564-14572146 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 62

Conread position: 146-596
Cow position: chr20:38551167-38551635 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 322
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 51, 34

Conread position: 149-558
Cow position: chr20:29754582-29755009 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 309
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 58

Conread position: 150-488
Cow position: chr20:15566034-15565682 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 57

Conread position: 157-393
Cow position: chr20:37272523-37272768 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 43

Conread position: 157-595
Cow position: chr20:34098154-34097680 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 158-524
Cow position: chr20:21928717-21929086 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 42

Conread position: 159-521
Cow position: chr20:27408069-27407705 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 45

Conread position: 174-508
Cow position: chr20:21761602-21761946 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 16, 143

Conread position: 175-410
Cow position: chr20:41403400-41403647 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 23

Conread position: 175-594
Cow position: chr20:15312490-15312924 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 303
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 23

Conread position: 182-367
Cow position: chr20:8020732-8020926 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 16

Conread position: 182-404
Cow position: chr20:5269231-5268998 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 16

Conread position: 182-406
Cow position: chr20:28831801-28832037 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 183
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 16

Conread position: 182-464
Cow position: chr20:37165564-37165835 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 16

Conread position: 182-475
Cow position: chr20:14100600-14100299 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 16

Conread position: 182-483
Cow position: chr20:31323636-31323931 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 48, 16

Conread position: 182-483
Cow position: chr20:35741591-35741912 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 49, 17

Conread position: 182-485
Cow position: chr20:41627508-41627194 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 16

Conread position: 182-488
Cow position: chr20:3321300-3320997 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 11

Conread position: 182-488
Cow position: chr20:36207640-36207961 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 16

Conread position: 182-488
Cow position: chr20:42459014-42458709 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 16

Conread position: 182-508
Cow position: chr20:20739451-20739118 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 16

Conread position: 182-511
Cow position: chr20:28067588-28067252 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 16

Conread position: 182-520
Cow position: chr20:6602879-6603221 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 16

Conread position: 182-521
Cow position: chr20:12239842-12239497 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 16

Conread position: 182-583
Cow position: chr20:23846834-23846408 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 16

Conread position: 182-592
Cow position: chr20:3141421-3141841 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 182-592
Cow position: chr20:13994647-13995076 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 302
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 17

Conread position: 183-485
Cow position: chr20:15235604-15235899 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 17

Conread position: 183-558
Cow position: chr20:14980676-14980276 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 183-581
Cow position: chr20:5814409-5814825 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 295
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 46, 15

Conread position: 187-505
Cow position: chr20:20241943-20242251 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 220
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 11

Conread position: 188-557
Cow position: chr20:31080887-31081251 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 10

Conread position: 188-588
Cow position: chr20:15569106-15568694 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 11

Conread position: 189-459
Cow position: chr20:34084915-34085188 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 46

Conread position: 189-488
Cow position: chr20:5636325-5636628 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 40, 9

Conread position: 194-507
Cow position: chr20:11038452-11038748 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 35

Conread position: 194-558
Cow position: chr20:5025094-5024735 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 52, 35

Conread position: 194-590
Cow position: chr20:34107964-34108355 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 274
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 36, 77

Conread position: 195-585
Cow position: chr20:13025758-13025365 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 196-565
Cow position: chr20:30710799-30710405 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 36, 153

Conread position: 197-422
Cow position: chr20:18500071-18500289 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 28

Conread position: 197-425
Cow position: chr20:24727226-24727449 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 113

Conread position: 197-556
Cow position: chr20:8307865-8308233 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 80

Conread position: 197-558
Cow position: chr20:34221326-34221713 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 82

Conread position: 198-558
Cow position: chr20:4334667-4334307 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 47

Conread position: 199-477
Cow position: chr20:36040327-36040613 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 17

Conread position: 199-560
Cow position: chr20:41473875-41473517 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 76

Conread position: 199-561
Cow position: chr20:29990587-29990210 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 266
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 8, 110

Conread position: 201-565
Cow position: chr20:14917156-14917509 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 27, 99

Conread position: 203-505
Cow position: chr20:9267243-9266941 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 71

Conread position: 203-584
Cow position: chr20:14433570-14433162 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 388

Conread position: 205-483
Cow position: chr20:5385872-5385599 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 74, 23

Conread position: 206-556
Cow position: chr20:311204-311532 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 67

Conread position: 207-483
Cow position: chr20:40446191-40446473 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 23, 67

Conread position: 208-604
Cow position: chr20:8546931-8547337 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 63

Conread position: 211-548
Cow position: chr20:22484726-22485070 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 33, 18

Conread position: 215-558
Cow position: chr20:8261777-8262126 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 86

Conread position: 216-558
Cow position: chr20:38847368-38846996 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 139

Conread position: 220-558
Cow position: chr20:17470605-17470941 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 9, 92

Conread position: 220-558
Cow position: chr20:40726706-40726382 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 12

Conread position: 224-418
Cow position: chr20:27003854-27003646 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 48

Conread position: 228-469
Cow position: chr20:24000912-24000666 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 134

Conread position: 230-586
Cow position: chr20:23541269-23540914 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 56

Conread position: 233-508
Cow position: chr20:33439087-33438813 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 23

Conread position: 235-426
Cow position: chr20:34901459-34901659 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 38

Conread position: 239-558
Cow position: chr20:5078519-5078867 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 241-471
Cow position: chr20:12430894-12430667 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 27

Conread position: 243-438
Cow position: chr20:28804466-28804669 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 25

Conread position: 243-508
Cow position: chr20:35728054-35727757 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 244-556
Cow position: chr20:24711739-24712069 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 24

Conread position: 245-472
Cow position: chr20:17765427-17765198 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 5, 14

Conread position: 245-555
Cow position: chr20:28594189-28594521 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 5

Conread position: 245-556
Cow position: chr20:15822457-15822779 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 46, 23

Conread position: 249-448
Cow position: chr20:13794898-13795090 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 41

Conread position: 249-488
Cow position: chr20:36633726-36633959 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 104

Conread position: 249-509
Cow position: chr20:13983272-13983531 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 17

Conread position: 249-557
Cow position: chr20:10188184-10188505 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 64, 36

Conread position: 249-558
Cow position: chr20:28249092-28249414 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 84

Conread position: 251-464
Cow position: chr20:8098193-8098411 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 95

Conread position: 255-582
Cow position: chr20:5644702-5645036 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 13

Conread position: 255-598
Cow position: chr20:36741391-36741735 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 35, 13

Conread position: 257-558
Cow position: chr20:28819016-28818705 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 210
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 195

Conread position: 260-589
Cow position: chr20:20926702-20926361 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 8

Conread position: 260-594
Cow position: chr20:11548803-11548463 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 95

Conread position: 264-620
Cow position: chr20:35192700-35193050 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 99

Conread position: 265-410
Cow position: chr20:37357530-37357678 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 265-558
Cow position: chr20:5009662-5009963 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 27, 54

Conread position: 266-521
Cow position: chr20:11188873-11188625 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 9

Conread position: 268-475
Cow position: chr20:16491998-16492209 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 88

Conread position: 268-558
Cow position: chr20:11135830-11135521 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 145, 24

Conread position: 269-475
Cow position: chr20:16548350-16548142 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 84

Conread position: 269-477
Cow position: chr20:12064853-12065054 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 75

Conread position: 272-483
Cow position: chr20:14563984-14564195 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 72

Conread position: 272-556
Cow position: chr20:6248665-6248370 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 77, 21

Conread position: 272-566
Cow position: chr20:23506539-23506240 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 18, 83

Conread position: 272-601
Cow position: chr20:11359693-11359365 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 141, 18

Conread position: 273-554
Cow position: chr20:33067432-33067132 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 19

Conread position: 274-554
Cow position: chr20:38089844-38090143 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 275-577
Cow position: chr20:11008104-11008423 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 55

Conread position: 277-508
Cow position: chr20:20056549-20056319 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 13, 79

Conread position: 277-558
Cow position: chr20:21428103-21428389 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 114, 7

Conread position: 277-564
Cow position: chr20:354961-354660 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 224
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 15, 79

Conread position: 278-557
Cow position: chr20:30119636-30119362 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 35, 77

Conread position: 280-558
Cow position: chr20:23850559-23850852 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 74

Conread position: 289-488
Cow position: chr20:10772152-10772354 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 137

Conread position: 290-558
Cow position: chr20:20898641-20898358 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 23, 49

Conread position: 291-554
Cow position: chr20:9376419-9376689 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 61

Conread position: 292-558
Cow position: chr20:39016924-39016638 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 24, 6

Conread position: 292-560
Cow position: chr20:20934782-20934501 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 9

Conread position: 294-584
Cow position: chr20:34397458-34397179 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 60

Conread position: 294-594
Cow position: chr20:23548699-23549021 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 296

Conread position: 299-558
Cow position: chr20:16941330-16941051 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 56, 106

Conread position: 305-457
Cow position: chr20:16096807-16096959 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 38

Conread position: 310-508
Cow position: chr20:7709814-7709611 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 66

Conread position: 312-485
Cow position: chr20:34083693-34083861 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 101, 37

Conread position: 314-558
Cow position: chr20:12534766-12534519 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 164, 28

Conread position: 318-558
Cow position: chr20:6372582-6372333 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 94

Conread position: 318-609
Cow position: chr20:25953246-25953551 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 35

Conread position: 319-558
Cow position: chr20:20125050-20124800 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 150, 30

Conread position: 319-563
Cow position: chr20:14620329-14620070 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 319-565
Cow position: chr20:12126324-12126063 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 94, 23

Conread position: 323-508
Cow position: chr20:40157885-40158069 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 30

Conread position: 323-558
Cow position: chr20:16291678-16291922 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 29

Conread position: 327-546
Cow position: chr20:18831887-18831661 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 65

Conread position: 333-475
Cow position: chr20:361190-361054 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 17

Conread position: 335-484
Cow position: chr20:17388521-17388675 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 98

Conread position: 336-489
Cow position: chr20:41471097-41471248 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 16

Conread position: 336-558
Cow position: chr20:1824635-1824400 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 336-558
Cow position: chr20:5364925-5365159 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 24, 10

Conread position: 339-616
Cow position: chr20:14282919-14283218 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 74, 0

Conread position: 344-521
Cow position: chr20:2743134-2742945 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 344-571
Cow position: chr20:11101416-11101645 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 69

Conread position: 347-554
Cow position: chr20:23590740-23590523 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 57

Conread position: 348-588
Cow position: chr20:37919361-37919117 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 5

Conread position: 353-506
Cow position: chr20:33820468-33820629 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 353-581
Cow position: chr20:14739806-14739567 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 91

Conread position: 353-609
Cow position: chr20:30744708-30744437 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 199

Conread position: 354-505
Cow position: chr20:5703485-5703638 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 119

Conread position: 355-596
Cow position: chr20:10246038-10245787 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 358-558
Cow position: chr20:31148181-31148382 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 168, 55

Conread position: 359-591
Cow position: chr20:25021447-25021696 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 87

Conread position: 363-558
Cow position: chr20:8679644-8679429 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 364-558
Cow position: chr20:16875542-16875348 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 169

Conread position: 375-589
Cow position: chr20:30639748-30639514 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 378-593
Cow position: chr20:21941472-21941690 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 35, 153

Conread position: 380-595
Cow position: chr20:27315022-27315244 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 97, 35

Conread position: 381-557
Cow position: chr20:31845244-31845058 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 381-569
Cow position: chr20:14607870-14607670 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 382-558
Cow position: chr20:2316383-2316196 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 383-558
Cow position: chr20:35442239-35442050 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 383-565
Cow position: chr20:7934327-7934516 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 30, 22

Conread position: 385-559
Cow position: chr20:5938381-5938206 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 146

Conread position: 385-563
Cow position: chr20:33076778-33076585 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 386-600
Cow position: chr20:37273044-37273266 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 387-558
Cow position: chr20:19201578-19201765 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 389-558
Cow position: chr20:11499061-11499234 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 26

Conread position: 396-556
Cow position: chr20:2798934-2798766 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 10

Conread position: 396-558
Cow position: chr20:14755784-14755612 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 398-595
Cow position: chr20:600364-600566 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 173

Conread position: 404-557
Cow position: chr20:34847970-34848133 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.