Cow genome map

Conread name: rpigcf0_003055.y1

Conread position: 1-394
Cow position: chr21:42190488-42190096 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 19

Conread position: 1-414
Cow position: chr21:20925835-20925408 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 25

Conread position: 1-519
Cow position: chr21:46973464-46972954 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 365
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 127, 19

Conread position: 1-558
Cow position: chr21:37706747-37706160 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 1-558
Cow position: chr21:45971485-45970927 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 25

Conread position: 1-589
Cow position: chr21:22719110-22718502 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 18

Conread position: 4-475
Cow position: chr21:28989292-28989770 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 7-571
Cow position: chr21:3236209-3236768 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 13

Conread position: 8-402
Cow position: chr21:8985227-8985635 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 13

Conread position: 8-421
Cow position: chr21:3813789-3813381 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 12

Conread position: 8-488
Cow position: chr21:44671431-44671912 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 11

Conread position: 8-602
Cow position: chr21:32297824-32297213 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 12

Conread position: 12-446
Cow position: chr21:28512221-28512642 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 100

Conread position: 13-485
Cow position: chr21:27341910-27341428 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 89

Conread position: 13-571
Cow position: chr21:30849263-30848682 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 199

Conread position: 14-391
Cow position: chr21:4567976-4568357 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 97

Conread position: 14-392
Cow position: chr21:2786109-2785703 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 109, 16

Conread position: 14-411
Cow position: chr21:47802579-47802167 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 20

Conread position: 14-423
Cow position: chr21:32535661-32536082 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 43

Conread position: 14-488
Cow position: chr21:20045084-20044594 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 7

Conread position: 14-508
Cow position: chr21:45474071-45473569 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 16

Conread position: 14-584
Cow position: chr21:34010704-34010118 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 5

Conread position: 14-607
Cow position: chr21:15545678-15545064 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 13

Conread position: 15-590
Cow position: chr21:30232017-30231408 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 108

Conread position: 17-558
Cow position: chr21:46849434-46848881 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 78

Conread position: 18-485
Cow position: chr21:5153303-5153788 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 189

Conread position: 18-506
Cow position: chr21:42414413-42413910 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 103

Conread position: 19-241
Cow position: chr21:30250518-30250291 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 161, 64

Conread position: 19-288
Cow position: chr21:38691880-38692153 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 127, 35

Conread position: 19-335
Cow position: chr21:33420029-33419706 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 221

Conread position: 19-395
Cow position: chr21:27743428-27743827 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 19-426
Cow position: chr21:48262822-48263242 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 90

Conread position: 19-428
Cow position: chr21:17174834-17175253 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 258
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 118, 185

Conread position: 19-460
Cow position: chr21:33729120-33729572 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 189

Conread position: 19-467
Cow position: chr21:34391279-34390826 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 69

Conread position: 19-469
Cow position: chr21:24887684-24888149 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 332
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 84, 70

Conread position: 19-469
Cow position: chr21:29214468-29214009 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 100

Conread position: 19-474
Cow position: chr21:19363763-19363304 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 122

Conread position: 19-487
Cow position: chr21:39401287-39401761 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 182

Conread position: 19-490
Cow position: chr21:33209886-33210360 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 100

Conread position: 19-492
Cow position: chr21:44514953-44515434 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 12

Conread position: 19-506
Cow position: chr21:17433565-17433082 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 336
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 89

Conread position: 19-508
Cow position: chr21:15976328-15976822 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 94

Conread position: 19-556
Cow position: chr21:38120790-38121329 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 192

Conread position: 19-557
Cow position: chr21:48638059-48637504 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 188

Conread position: 19-558
Cow position: chr21:11645298-11644714 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 177

Conread position: 19-558
Cow position: chr21:37299151-37299712 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 193

Conread position: 19-558
Cow position: chr21:42500723-42501304 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 33

Conread position: 19-563
Cow position: chr21:7672820-7673370 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 148

Conread position: 19-565
Cow position: chr21:23606361-23606926 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 188

Conread position: 19-571
Cow position: chr21:24857998-24858584 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 188

Conread position: 19-587
Cow position: chr21:25764321-25764896 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 186

Conread position: 19-588
Cow position: chr21:5238093-5238668 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 104

Conread position: 19-598
Cow position: chr21:25344564-25345156 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 149

Conread position: 19-606
Cow position: chr21:81757-82355 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 188

Conread position: 20-427
Cow position: chr21:4794909-4795334 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 296
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 75, 164

Conread position: 20-508
Cow position: chr21:16696058-16696569 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 185

Conread position: 20-569
Cow position: chr21:23821857-23822415 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 370
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 162, 23

Conread position: 21-373
Cow position: chr21:12616831-12617194 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 107, 115

Conread position: 21-392
Cow position: chr21:9862932-9862569 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 121

Conread position: 21-393
Cow position: chr21:26829546-26829189 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 163, 98

Conread position: 21-406
Cow position: chr21:16612318-16612712 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 159

Conread position: 21-507
Cow position: chr21:13128407-13127906 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 56

Conread position: 21-558
Cow position: chr21:24297074-24296513 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 120

Conread position: 22-243
Cow position: chr21:28029087-28029317 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 160, 185

Conread position: 22-303
Cow position: chr21:31158945-31159246 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 67

Conread position: 22-389
Cow position: chr21:912271-911896 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 54

Conread position: 22-397
Cow position: chr21:42914054-42913665 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 14

Conread position: 22-405
Cow position: chr21:13897883-13898274 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 112

Conread position: 22-408
Cow position: chr21:363345-363722 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 158

Conread position: 22-409
Cow position: chr21:5455296-5454901 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 183

Conread position: 22-420
Cow position: chr21:44007-44407 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 92

Conread position: 22-422
Cow position: chr21:24222851-24222433 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 97

Conread position: 22-422
Cow position: chr21:28881839-28882239 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 103

Conread position: 22-455
Cow position: chr21:38867877-38867450 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 109

Conread position: 22-470
Cow position: chr21:4098572-4099021 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 308
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 101, 18

Conread position: 22-470
Cow position: chr21:15742407-15741933 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 108, 164

Conread position: 22-475
Cow position: chr21:395568-396024 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 115

Conread position: 22-475
Cow position: chr21:7582215-7581748 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 124

Conread position: 22-475
Cow position: chr21:25382688-25383183 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 274

Conread position: 22-476
Cow position: chr21:4998795-4998337 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 183

Conread position: 22-476
Cow position: chr21:45916014-45915560 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 158

Conread position: 22-486
Cow position: chr21:28429140-28429612 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 92

Conread position: 22-488
Cow position: chr21:36642597-36643073 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 185

Conread position: 22-488
Cow position: chr21:41974689-41974210 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 185

Conread position: 22-502
Cow position: chr21:30990578-30990105 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 144

Conread position: 22-504
Cow position: chr21:10514502-10514995 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 109

Conread position: 22-508
Cow position: chr21:28923833-28924300 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 35

Conread position: 22-542
Cow position: chr21:6623838-6624380 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 90

Conread position: 22-558
Cow position: chr21:4282174-4281631 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 96

Conread position: 22-563
Cow position: chr21:28210875-28211434 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 382
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 120, 196

Conread position: 22-565
Cow position: chr21:643027-643579 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 181

Conread position: 22-566
Cow position: chr21:14760275-14760817 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 61

Conread position: 22-567
Cow position: chr21:3253868-3254394 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 366
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 161, 81

Conread position: 22-569
Cow position: chr21:20160374-20160941 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 184

Conread position: 22-589
Cow position: chr21:6833742-6834331 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 185

Conread position: 22-590
Cow position: chr21:10263732-10264318 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 66

Conread position: 22-593
Cow position: chr21:937742-938305 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 99

Conread position: 22-614
Cow position: chr21:27863829-27863210 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 144

Conread position: 23-270
Cow position: chr21:31278473-31278729 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 101

Conread position: 23-348
Cow position: chr21:48484749-48484417 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 105

Conread position: 23-388
Cow position: chr21:42905679-42905302 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 6, 18

Conread position: 23-412
Cow position: chr21:6765012-6764607 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 183

Conread position: 23-472
Cow position: chr21:47760467-47760922 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 183

Conread position: 23-475
Cow position: chr21:5566682-5567143 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 118

Conread position: 23-475
Cow position: chr21:42384199-42384665 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 100

Conread position: 23-508
Cow position: chr21:13089786-13089280 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 359
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 18

Conread position: 23-558
Cow position: chr21:11740439-11739867 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 20

Conread position: 28-557
Cow position: chr21:36762745-36763313 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 158

Conread position: 28-587
Cow position: chr21:15584703-15584143 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 85

Conread position: 28-588
Cow position: chr21:9415939-9416520 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 55

Conread position: 29-401
Cow position: chr21:24764964-24765364 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 78, 154

Conread position: 30-399
Cow position: chr21:28617300-28617671 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 94

Conread position: 30-410
Cow position: chr21:45866637-45867025 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 10

Conread position: 34-558
Cow position: chr21:33997523-33996998 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 176

Conread position: 35-558
Cow position: chr21:23586566-23587124 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 48

Conread position: 36-569
Cow position: chr21:36756319-36756871 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 60

Conread position: 37-508
Cow position: chr21:28734207-28733723 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 170

Conread position: 39-438
Cow position: chr21:10726988-10727397 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 130

Conread position: 41-409
Cow position: chr21:17414819-17414459 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 205, 83

Conread position: 43-246
Cow position: chr21:12507123-12507333 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 163

Conread position: 43-373
Cow position: chr21:40058516-40058861 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 164

Conread position: 43-558
Cow position: chr21:9940467-9939956 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 344
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 137, 85

Conread position: 45-466
Cow position: chr21:43357548-43357108 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 159

Conread position: 46-565
Cow position: chr21:18568935-18568378 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 76

Conread position: 54-402
Cow position: chr21:44108731-44109086 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 83

Conread position: 54-440
Cow position: chr21:42023857-42024242 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 175, 117

Conread position: 54-475
Cow position: chr21:26648282-26647858 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 103

Conread position: 54-484
Cow position: chr21:33562736-33563168 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 100

Conread position: 54-489
Cow position: chr21:13718138-13717693 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 289
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 261

Conread position: 54-505
Cow position: chr21:17709550-17710007 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 301
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 124, 80

Conread position: 54-507
Cow position: chr21:19952813-19952349 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 311
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 82

Conread position: 54-521
Cow position: chr21:17419819-17419337 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 324
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 126, 257

Conread position: 54-558
Cow position: chr21:5898674-5898157 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 56

Conread position: 56-582
Cow position: chr21:41155586-41156150 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 96

Conread position: 57-411
Cow position: chr21:39889019-39888657 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 150

Conread position: 57-521
Cow position: chr21:17643238-17642779 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 77

Conread position: 58-507
Cow position: chr21:36795326-36795798 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 152

Conread position: 59-467
Cow position: chr21:30607376-30606937 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 163

Conread position: 60-470
Cow position: chr21:23801392-23800976 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 67-502
Cow position: chr21:13728022-13727578 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 283
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 29

Conread position: 67-590
Cow position: chr21:14464300-14464872 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 114

Conread position: 70-558
Cow position: chr21:44252090-44251589 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 139

Conread position: 70-565
Cow position: chr21:3585618-3585105 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 80

Conread position: 71-455
Cow position: chr21:13035310-13034901 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 248

Conread position: 74-507
Cow position: chr21:44826133-44825697 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 302
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 110, 31

Conread position: 77-554
Cow position: chr21:49700291-49699789 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 131

Conread position: 79-558
Cow position: chr21:39403791-39403276 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 87

Conread position: 81-507
Cow position: chr21:23322332-23321889 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 123

Conread position: 83-488
Cow position: chr21:10151546-10151973 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 83

Conread position: 83-584
Cow position: chr21:38900524-38901041 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 125

Conread position: 88-443
Cow position: chr21:5636965-5636595 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 94, 119

Conread position: 88-443
Cow position: chr21:8451656-8452010 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 51, 36

Conread position: 90-609
Cow position: chr21:29015131-29014615 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 28

Conread position: 93-558
Cow position: chr21:15445318-15444830 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 116

Conread position: 96-362
Cow position: chr21:37361710-37361434 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 33

Conread position: 96-473
Cow position: chr21:17936132-17936527 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 265
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 113

Conread position: 96-509
Cow position: chr21:29484748-29485169 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 33

Conread position: 103-558
Cow position: chr21:38917989-38918454 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 103-560
Cow position: chr21:8351530-8351040 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 355
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 28

Conread position: 107-483
Cow position: chr21:33498-33884 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 107-483
Cow position: chr21:17471655-17472042 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 46

Conread position: 108-577
Cow position: chr21:28626017-28626498 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 96

Conread position: 114-588
Cow position: chr21:19083822-19083305 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 357
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 23, 96

Conread position: 115-489
Cow position: chr21:31662243-31662636 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 90

Conread position: 115-558
Cow position: chr21:30592515-30592062 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 315
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 65, 31

Conread position: 116-521
Cow position: chr21:45330158-45329744 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 117-483
Cow position: chr21:18929482-18929861 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 251
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 65, 157

Conread position: 117-483
Cow position: chr21:21982591-21982970 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 157

Conread position: 119-558
Cow position: chr21:23535500-23535965 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 121

Conread position: 122-475
Cow position: chr21:3818005-3818365 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 59

Conread position: 127-521
Cow position: chr21:19258621-19259026 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 80

Conread position: 127-560
Cow position: chr21:32339940-32339491 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 29

Conread position: 128-558
Cow position: chr21:6051302-6051757 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 79

Conread position: 128-558
Cow position: chr21:41620915-41621380 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 79

Conread position: 128-578
Cow position: chr21:1058873-1059330 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 129-547
Cow position: chr21:8206587-8206993 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 113, 51

Conread position: 129-567
Cow position: chr21:41579548-41580016 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 74

Conread position: 130-507
Cow position: chr21:41597613-41598000 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 77

Conread position: 131-421
Cow position: chr21:3381282-3380975 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 51, 40

Conread position: 131-558
Cow position: chr21:27521526-27521090 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 134-392
Cow position: chr21:42145718-42145992 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 75

Conread position: 134-496
Cow position: chr21:13738373-13738729 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 33, 69

Conread position: 134-555
Cow position: chr21:3361212-3360767 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 135-475
Cow position: chr21:42841788-42841440 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 135-558
Cow position: chr21:15911203-15911630 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 72

Conread position: 136-506
Cow position: chr21:37345301-37344915 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 136-558
Cow position: chr21:23568012-23568477 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 76

Conread position: 137-469
Cow position: chr21:18780165-18779825 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 98

Conread position: 137-469
Cow position: chr21:45330803-45330456 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 70

Conread position: 137-483
Cow position: chr21:28955327-28955666 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 43

Conread position: 137-489
Cow position: chr21:12801939-12801578 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 67

Conread position: 137-506
Cow position: chr21:13752698-13753062 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 98

Conread position: 137-508
Cow position: chr21:13585253-13584875 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 46

Conread position: 137-556
Cow position: chr21:42135819-42135369 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 304
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 40, 70

Conread position: 137-600
Cow position: chr21:45355641-45356110 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 322
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 48, 70

Conread position: 138-505
Cow position: chr21:1591357-1591744 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 138-560
Cow position: chr21:31253341-31253788 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 151

Conread position: 139-393
Cow position: chr21:3047493-3047751 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 66

Conread position: 139-558
Cow position: chr21:3763930-3763499 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 139-558
Cow position: chr21:38449645-38449200 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 68

Conread position: 140-558
Cow position: chr21:17193952-17193496 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 67

Conread position: 141-558
Cow position: chr21:5426755-5427179 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 61

Conread position: 142-507
Cow position: chr21:13365151-13365535 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 68

Conread position: 143-593
Cow position: chr21:47764301-47763838 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 144-571
Cow position: chr21:47465309-47464854 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 63

Conread position: 144-626
Cow position: chr21:40589671-40589158 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 63

Conread position: 149-464
Cow position: chr21:46143760-46144105 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 58

Conread position: 151-409
Cow position: chr21:39450349-39450071 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 13, 55

Conread position: 151-521
Cow position: chr21:9990333-9990721 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 273
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 36, 54

Conread position: 152-558
Cow position: chr21:17183741-17184170 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 55

Conread position: 155-508
Cow position: chr21:18790733-18790378 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 50

Conread position: 176-475
Cow position: chr21:8235692-8235405 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 70, 22

Conread position: 179-560
Cow position: chr21:42007604-42007214 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 180-557
Cow position: chr21:10114472-10114082 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 18

Conread position: 181-571
Cow position: chr21:29978904-29978499 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 7

Conread position: 182-343
Cow position: chr21:9998862-9998692 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 16

Conread position: 182-423
Cow position: chr21:45439391-45439131 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 17

Conread position: 182-428
Cow position: chr21:18041984-18041737 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 17

Conread position: 182-483
Cow position: chr21:10000939-10001240 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 20

Conread position: 182-488
Cow position: chr21:27146133-27145823 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 47, 16

Conread position: 182-503
Cow position: chr21:26244790-26245105 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 16

Conread position: 182-508
Cow position: chr21:10633782-10633453 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 47, 16

Conread position: 182-558
Cow position: chr21:957526-957921 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 182-558
Cow position: chr21:23311089-23310702 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 16

Conread position: 182-558
Cow position: chr21:28244334-28244719 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 16

Conread position: 182-563
Cow position: chr21:18065065-18064679 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 47, 16

Conread position: 182-564
Cow position: chr21:21169636-21169239 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 182-611
Cow position: chr21:10005027-10004581 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 16

Conread position: 183-459
Cow position: chr21:11250725-11251010 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 15

Conread position: 183-476
Cow position: chr21:9028480-9028774 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 15

Conread position: 183-508
Cow position: chr21:17455244-17455576 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 46, 15

Conread position: 183-509
Cow position: chr21:45921199-45920866 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 15

Conread position: 183-567
Cow position: chr21:13713984-13713576 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 266
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 13

Conread position: 184-419
Cow position: chr21:6102399-6102160 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 15

Conread position: 184-484
Cow position: chr21:712795-713109 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 106, 14

Conread position: 184-508
Cow position: chr21:24642380-24642712 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 14

Conread position: 184-560
Cow position: chr21:6713662-6713270 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 281
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 14

Conread position: 184-589
Cow position: chr21:10823414-10823822 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 285
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 14

Conread position: 185-508
Cow position: chr21:11359899-11360226 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 44, 13

Conread position: 185-558
Cow position: chr21:41590695-41590314 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 13

Conread position: 185-576
Cow position: chr21:12462109-12461699 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 186-390
Cow position: chr21:39809762-39809965 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 44, 12

Conread position: 186-558
Cow position: chr21:20152810-20153209 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 12

Conread position: 187-407
Cow position: chr21:34736894-34737118 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 11

Conread position: 187-558
Cow position: chr21:17875332-17874938 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 45, 11

Conread position: 188-475
Cow position: chr21:20418825-20418525 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 20

Conread position: 189-488
Cow position: chr21:10538398-10538087 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 177

Conread position: 194-557
Cow position: chr21:34151450-34151827 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 236

Conread position: 195-584
Cow position: chr21:46909-47325 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 77

Conread position: 196-472
Cow position: chr21:19060212-19059939 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 77, 14

Conread position: 197-502
Cow position: chr21:2810271-2809975 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 93, 20

Conread position: 199-557
Cow position: chr21:14452111-14452484 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 81

Conread position: 201-445
Cow position: chr21:18414926-18415179 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 6, 73

Conread position: 201-584
Cow position: chr21:30222218-30222619 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 31, 74

Conread position: 202-476
Cow position: chr21:36789671-36789954 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 93

Conread position: 204-450
Cow position: chr21:42096944-42097207 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 73

Conread position: 205-485
Cow position: chr21:18818396-18818108 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 24

Conread position: 206-587
Cow position: chr21:23980305-23979899 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 149

Conread position: 208-571
Cow position: chr21:30835252-30835631 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 51

Conread position: 210-571
Cow position: chr21:46552213-46551860 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 82, 5

Conread position: 211-483
Cow position: chr21:2657706-2657974 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 63

Conread position: 211-483
Cow position: chr21:25629025-25628747 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 139

Conread position: 213-421
Cow position: chr21:34722901-34722685 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 71

Conread position: 213-558
Cow position: chr21:16152319-16152692 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 16, 218

Conread position: 215-391
Cow position: chr21:9980073-9979898 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 55

Conread position: 216-558
Cow position: chr21:10673023-10673362 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 13

Conread position: 217-555
Cow position: chr21:10561691-10561336 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 235
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 56

Conread position: 222-592
Cow position: chr21:28919625-28919244 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 225-483
Cow position: chr21:8527575-8527319 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 17, 72

Conread position: 228-483
Cow position: chr21:6758255-6758508 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 62, 40

Conread position: 231-503
Cow position: chr21:42022194-42022462 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 38

Conread position: 233-554
Cow position: chr21:10410132-10410471 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 144

Conread position: 237-561
Cow position: chr21:7394297-7394624 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 33

Conread position: 238-557
Cow position: chr21:6997856-6998192 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 124

Conread position: 240-508
Cow position: chr21:30256348-30256084 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 9

Conread position: 243-415
Cow position: chr21:33360110-33359937 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 25

Conread position: 243-457
Cow position: chr21:9036219-9036440 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 128

Conread position: 243-485
Cow position: chr21:27429390-27429618 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 25

Conread position: 243-508
Cow position: chr21:36909858-36910119 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 25

Conread position: 243-557
Cow position: chr21:28237790-28237448 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 51

Conread position: 243-557
Cow position: chr21:41107838-41107525 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 47, 25

Conread position: 243-569
Cow position: chr21:22121446-22121765 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 233, 25

Conread position: 243-571
Cow position: chr21:37014479-37014160 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 50, 25

Conread position: 243-584
Cow position: chr21:19702648-19703008 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 30

Conread position: 244-428
Cow position: chr21:13495465-13495653 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 24

Conread position: 244-467
Cow position: chr21:17929918-17929688 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 249-467
Cow position: chr21:40432379-40432594 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 19

Conread position: 249-558
Cow position: chr21:1511221-1511538 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 25

Conread position: 249-558
Cow position: chr21:40266051-40266376 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 168

Conread position: 249-569
Cow position: chr21:22210314-22209980 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 43, 19

Conread position: 250-542
Cow position: chr21:7377998-7377692 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 7

Conread position: 251-558
Cow position: chr21:37640487-37640818 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 94

Conread position: 252-588
Cow position: chr21:15544285-15543956 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 254-558
Cow position: chr21:41140783-41140463 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 36, 14

Conread position: 254-588
Cow position: chr21:21686353-21686699 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 36, 12

Conread position: 259-460
Cow position: chr21:10743330-10743528 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 72

Conread position: 260-558
Cow position: chr21:18060016-18059707 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 8

Conread position: 260-571
Cow position: chr21:11779589-11779273 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 8

Conread position: 263-508
Cow position: chr21:43259166-43259409 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 16

Conread position: 265-503
Cow position: chr21:47363794-47363546 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 265-560
Cow position: chr21:47714059-47713753 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 130

Conread position: 265-566
Cow position: chr21:977200-976888 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 89

Conread position: 267-474
Cow position: chr21:3400882-3400676 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 43

Conread position: 267-503
Cow position: chr21:22014131-22014373 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 69

Conread position: 267-596
Cow position: chr21:13656683-13656346 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 25, 50

Conread position: 268-417
Cow position: chr21:22720174-22720327 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 32

Conread position: 268-485
Cow position: chr21:48527355-48527575 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 89

Conread position: 268-558
Cow position: chr21:868978-868667 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 65

Conread position: 274-558
Cow position: chr21:21907476-21907189 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 124

Conread position: 275-558
Cow position: chr21:10072099-10072418 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 277-565
Cow position: chr21:13842444-13842752 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 75

Conread position: 283-558
Cow position: chr21:42209668-42209393 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 198

Conread position: 285-488
Cow position: chr21:734561-734757 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 67

Conread position: 286-485
Cow position: chr21:471643-471841 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 24, 77

Conread position: 286-558
Cow position: chr21:13395564-13395833 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 127, 63

Conread position: 286-558
Cow position: chr21:17982942-17983223 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 40

Conread position: 289-558
Cow position: chr21:36696121-36695838 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 72

Conread position: 290-558
Cow position: chr21:20165611-20165891 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 54

Conread position: 290-579
Cow position: chr21:6317710-6317412 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 62

Conread position: 292-563
Cow position: chr21:28030260-28030536 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 128

Conread position: 294-558
Cow position: chr21:8950156-8950445 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 294-589
Cow position: chr21:38720226-38720532 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 54

Conread position: 301-571
Cow position: chr21:31159384-31159651 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 12, 53

Conread position: 306-561
Cow position: chr21:10147979-10148254 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 44

Conread position: 310-487
Cow position: chr21:9334476-9334656 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 48, 32

Conread position: 310-509
Cow position: chr21:29405223-29405032 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 42

Conread position: 310-534
Cow position: chr21:6387992-6388220 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 38

Conread position: 310-564
Cow position: chr21:32393058-32392804 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 39

Conread position: 310-596
Cow position: chr21:44724373-44724088 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 103, 32

Conread position: 311-483
Cow position: chr21:7583839-7584015 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 40

Conread position: 313-558
Cow position: chr21:8546022-8545768 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 172, 10

Conread position: 316-565
Cow position: chr21:12104362-12104612 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 172

Conread position: 319-570
Cow position: chr21:12739080-12739352 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 55

Conread position: 319-571
Cow position: chr21:36508242-36508495 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 157, 33

Conread position: 319-571
Cow position: chr21:41918245-41917974 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 36, 31

Conread position: 319-594
Cow position: chr21:7768435-7768715 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 215

Conread position: 319-603
Cow position: chr21:13588763-13589059 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 91

Conread position: 322-486
Cow position: chr21:23460144-23460299 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 323-557
Cow position: chr21:41287790-41287545 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 323-595
Cow position: chr21:8431097-8430808 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 325-508
Cow position: chr21:30157802-30157616 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 42

Conread position: 325-558
Cow position: chr21:29658286-29658526 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 88, 17

Conread position: 326-558
Cow position: chr21:39319406-39319158 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 31

Conread position: 329-565
Cow position: chr21:16793800-16794053 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 20

Conread position: 331-521
Cow position: chr21:36149473-36149672 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 18

Conread position: 335-594
Cow position: chr21:8713944-8713670 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 36

Conread position: 338-558
Cow position: chr21:31279278-31279505 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 11

Conread position: 339-558
Cow position: chr21:6851192-6851417 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 156

Conread position: 341-591
Cow position: chr21:42144850-42145105 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 9

Conread position: 345-584
Cow position: chr21:13580440-13580691 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 17

Conread position: 346-558
Cow position: chr21:24797684-24797907 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 130, 67

Conread position: 350-557
Cow position: chr21:24266534-24266310 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 17

Conread position: 352-556
Cow position: chr21:7066348-7066135 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 68

Conread position: 352-584
Cow position: chr21:46451919-46451693 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 46

Conread position: 352-589
Cow position: chr21:36682358-36682606 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 227

Conread position: 353-487
Cow position: chr21:12207768-12207635 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 121

Conread position: 353-488
Cow position: chr21:30119728-30119862 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 87

Conread position: 353-508
Cow position: chr21:44592175-44592020 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 119

Conread position: 353-524
Cow position: chr21:41610201-41610375 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 150

Conread position: 353-557
Cow position: chr21:46809737-46809513 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 353-561
Cow position: chr21:40475534-40475756 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 10

Conread position: 353-595
Cow position: chr21:46612760-46612510 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 68

Conread position: 354-587
Cow position: chr21:37838031-37837798 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 134

Conread position: 354-626
Cow position: chr21:43692852-43693149 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 8

Conread position: 355-508
Cow position: chr21:46470222-46470377 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 55

Conread position: 355-557
Cow position: chr21:44829723-44829505 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 355-558
Cow position: chr21:11353098-11353316 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 39

Conread position: 355-594
Cow position: chr21:27677518-27677770 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 61

Conread position: 356-521
Cow position: chr21:7221303-7221139 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 116

Conread position: 356-558
Cow position: chr21:20213741-20213519 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 357-560
Cow position: chr21:40291708-40291495 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 73

Conread position: 358-508
Cow position: chr21:13163898-13164055 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 358-558
Cow position: chr21:41040983-41041200 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 358-594
Cow position: chr21:28191395-28191630 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 81

Conread position: 362-519
Cow position: chr21:6736146-6735985 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 362-558
Cow position: chr21:13225758-13225969 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 362-558
Cow position: chr21:30938629-30938414 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 364-607
Cow position: chr21:12348810-12349072 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 370-579
Cow position: chr21:30243630-30243419 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 154

Conread position: 371-558
Cow position: chr21:2537087-2536884 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 371-577
Cow position: chr21:24875404-24875623 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 378-609
Cow position: chr21:48482469-48482223 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 35

Conread position: 380-557
Cow position: chr21:42017540-42017350 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 17

Conread position: 383-558
Cow position: chr21:29418636-29418823 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 31

Conread position: 388-558
Cow position: chr21:42189688-42189508 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 389-593
Cow position: chr21:15869760-15869975 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 392-590
Cow position: chr21:16796923-16797133 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 157

Conread position: 396-558
Cow position: chr21:6291823-6292001 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 396-582
Cow position: chr21:32648112-32647905 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 398-571
Cow position: chr21:30970014-30970201 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 406-599
Cow position: chr21:3135782-3135575 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 7, 146

Show alignments to all cow chromosomes.